RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 BCORL1Q5H9F3 1711 aa29.83■■■□□ 2.37
SEC22C-212ENST00000454141 CCDC18Q5T9S5 1454 aa29.83■■■□□ 2.37
SEC22C-212ENST00000454141 ZFYVE16Q7Z3T8 1539 aa29.82■■■□□ 2.36
SEC22C-212ENST00000454141 MAGI2Q86UL8 1455 aa29.81■■■□□ 2.36
SEC22C-212ENST00000454141 EFCAB2Q5VUJ9 269 aa29.81■■■□□ 2.36
SEC22C-212ENST00000454141 PTPRMP28827 1452 aa29.8■■■□□ 2.36
SEC22C-212ENST00000454141 YEATS2Q9ULM3 1422 aa29.79■■■□□ 2.36
SEC22C-212ENST00000454141 FYCO1Q9BQS8 1478 aa29.78■■■□□ 2.36
SEC22C-212ENST00000454141 ARHGAP5Q13017 1502 aa29.76■■■□□ 2.36
SEC22C-212ENST00000454141 MADDQ8WXG6 1647 aa29.76■■■□□ 2.35
SEC22C-212ENST00000454141 ZNF518AQ6AHZ1 1483 aa29.69■■■□□ 2.34
SEC22C-212ENST00000454141 SIGLEC1Q9BZZ2 1709 aa29.68■■■□□ 2.34
SEC22C-212ENST00000454141 PREX2Q70Z35 1606 aa29.66■■■□□ 2.34
SEC22C-212ENST00000454141 RIMS1Q86UR5 1692 aaKnown RBP29.64■■■□□ 2.34
SEC22C-212ENST00000454141 CDC42BPBQ9Y5S2 1711 aa29.64■■■□□ 2.34
SEC22C-212ENST00000454141 KDM5CP41229 1560 aa29.64■■■□□ 2.33
SEC22C-212ENST00000454141 ATP10AO60312 1499 aa29.63■■■□□ 2.33
SEC22C-212ENST00000454141 C9orf84Q5VXU9 1444 aa29.62■■■□□ 2.33
SEC22C-212ENST00000454141 AFAP1Q8N556 730 aa29.6■■■□□ 2.33
SEC22C-212ENST00000454141 ABCC1P33527 1531 aa29.59■■■□□ 2.33
SEC22C-212ENST00000454141 MLECQ14165 292 aa29.55■■■□□ 2.32
SEC22C-212ENST00000454141 CDC42BPAQ5VT25 1732 aa29.54■■■□□ 2.32
SEC22C-212ENST00000454141 ARHGEF12Q9NZN5 1544 aa29.53■■■□□ 2.32
SEC22C-212ENST00000454141 MLH3Q9UHC1 1453 aa29.52■■■□□ 2.32
SEC22C-212ENST00000454141 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
SEC22C-212ENST00000454141 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
SEC22C-212ENST00000454141 MYT1LQ9UL68 1186 aa29.51■■■□□ 2.31
SEC22C-212ENST00000454141 CEP162Q5TB80 1403 aa29.51■■■□□ 2.31
SEC22C-212ENST00000454141 ITSN2Q9NZM3 1697 aa29.5■■■□□ 2.31
SEC22C-212ENST00000454141 LMTK3Q96Q04 1460 aa29.5■■■□□ 2.31
SEC22C-212ENST00000454141 FER1L4A9Z1Z3 1794 aa29.5■■■□□ 2.31
SEC22C-212ENST00000454141 GPATCH8Q9UKJ3 1502 aaKnown RBP29.48■■■□□ 2.31
SEC22C-212ENST00000454141 ABCA6Q8N139 1617 aa29.47■■■□□ 2.31
SEC22C-212ENST00000454141 REREQ9P2R6 1566 aa29.47■■■□□ 2.31
SEC22C-212ENST00000454141 PLPPR3Q6T4P5 718 aa29.46■■■□□ 2.31
SEC22C-212ENST00000454141 MTUS2Q5JR59 1369 aa29.46■■■□□ 2.31
SEC22C-212ENST00000454141 SAMD9LQ8IVG5 1584 aa29.44■■■□□ 2.3
SEC22C-212ENST00000454141 ZNF777Q9ULD5 760 aaPredicted RBP29.43■■■□□ 2.3
SEC22C-212ENST00000454141 SYCP2Q9BX26 1530 aa29.41■■■□□ 2.3
SEC22C-212ENST00000454141 ILDR1Q86SU0 546 aaPredicted RBP29.41■■■□□ 2.3
SEC22C-212ENST00000454141 CCNB3Q8WWL7 1395 aa29.4■■■□□ 2.3
SEC22C-212ENST00000454141 EHBP1L1Q8N3D4 1523 aa29.38■■■□□ 2.29
SEC22C-212ENST00000454141 KIDINS220Q9ULH0 1771 aa29.37■■■□□ 2.29
SEC22C-212ENST00000454141 AGLP35573 1532 aa29.37■■■□□ 2.29
SEC22C-212ENST00000454141 CFDP1Q9UEE9 299 aaPredicted RBP29.37■■■□□ 2.29
SEC22C-212ENST00000454141 PLEKHH2Q8IVE3 1493 aa29.36■■■□□ 2.29
SEC22C-212ENST00000454141 KIAA1107Q9UPP5 1409 aa29.34■■■□□ 2.29
SEC22C-212ENST00000454141 HNRNPMP52272 730 aaKnown RBP eCLIP29.32■■■□□ 2.28
SEC22C-212ENST00000454141 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
SEC22C-212ENST00000454141 HSPA2P54652 639 aa29.31■■■□□ 2.28
SEC22C-212ENST00000454141 SPAG9O60271 1321 aaKnown RBP29.3■■■□□ 2.28
SEC22C-212ENST00000454141 CEBPAP49715 358 aaPredicted RBP29.29■■■□□ 2.28
SEC22C-212ENST00000454141 ATP7AQ04656 1500 aa29.26■■■□□ 2.27
SEC22C-212ENST00000454141 INO80Q9ULG1 1556 aaPredicted RBP29.25■■■□□ 2.27
SEC22C-212ENST00000454141 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
SEC22C-212ENST00000454141 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
SEC22C-212ENST00000454141 ESF1Q9H501 851 aaKnown RBP29.22■■■□□ 2.27
SEC22C-212ENST00000454141 VPS8Q8N3P4 1428 aa29.2■■■□□ 2.26
SEC22C-212ENST00000454141 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.26
SEC22C-212ENST00000454141 CNTLNQ9NXG0 1405 aa29.19■■■□□ 2.26
SEC22C-212ENST00000454141 NCOA2Q15596 1464 aa29.18■■■□□ 2.26
SEC22C-212ENST00000454141 C3P01024 1663 aa29.18■■■□□ 2.26
SEC22C-212ENST00000454141 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
SEC22C-212ENST00000454141 UHRF1BP1Q6BDS2 1440 aa29.17■■■□□ 2.26
SEC22C-212ENST00000454141 SUPT6HQ7KZ85 1726 aaKnown RBP29.17■■■□□ 2.26
SEC22C-212ENST00000454141 A2MP01023 1474 aa29.17■■■□□ 2.26
SEC22C-212ENST00000454141 MBD5Q9P267 1494 aa29.17■■■□□ 2.26
SEC22C-212ENST00000454141 RTEL1-TNFRSF6BF6WH68 1400 aa29.09■■■□□ 2.25
SEC22C-212ENST00000454141 CAMSAP2Q08AD1 1489 aa29.09■■■□□ 2.25
SEC22C-212ENST00000454141 FBXO41Q8TF61 875 aa29.08■■■□□ 2.25
SEC22C-212ENST00000454141 LRRC9Q6ZRR7 1453 aa29.08■■■□□ 2.25
SEC22C-212ENST00000454141 MROH2AA6NES4 1674 aa29.08■■■□□ 2.25
SEC22C-212ENST00000454141 ADGBQ8N7X0 1667 aa29.08■■■□□ 2.25
SEC22C-212ENST00000454141 CCDC141Q6ZP82 1450 aa29.06■■■□□ 2.24
SEC22C-212ENST00000454141 SETD1BQ9UPS6 1966 aaKnown RBP29.04■■■□□ 2.24
SEC22C-212ENST00000454141 NPATQ14207 1427 aa29.03■■■□□ 2.24
SEC22C-212ENST00000454141 ZMYM3Q14202 1370 aa29.02■■■□□ 2.24
SEC22C-212ENST00000454141 MAP3K1Q13233 1512 aa29.02■■■□□ 2.24
SEC22C-212ENST00000454141 GGT6Q6P531 493 aa29■■■□□ 2.23
SEC22C-212ENST00000454141 CLTCQ00610 1675 aaKnown RBP28.99■■■□□ 2.23
SEC22C-212ENST00000454141 RSPH4AQ5TD94 716 aa28.99■■■□□ 2.23
SEC22C-212ENST00000454141 DHX29Q7Z478 1369 aaKnown RBP28.98■■■□□ 2.23
SEC22C-212ENST00000454141 STRCQ7RTU9 1775 aa28.98■■■□□ 2.23
SEC22C-212ENST00000454141 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
SEC22C-212ENST00000454141 PPP6R1Q9UPN7 881 aa28.96■■■□□ 2.23
SEC22C-212ENST00000454141 DMRT2Q9Y5R5 561 aa28.96■■■□□ 2.23
SEC22C-212ENST00000454141 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
SEC22C-212ENST00000454141 PTPRKQ15262 1439 aa28.9■■■□□ 2.22
SEC22C-212ENST00000454141 CERKQ8TCT0 537 aa28.89■■■□□ 2.22
SEC22C-212ENST00000454141 NCOA1Q15788 1441 aa28.88■■■□□ 2.21
SEC22C-212ENST00000454141 MYOM3Q5VTT5 1437 aa28.88■■■□□ 2.21
SEC22C-212ENST00000454141 TSPY4P0CV99 314 aa28.88■■■□□ 2.21
SEC22C-212ENST00000454141 TSPY10P0CW01 314 aa28.88■■■□□ 2.21
SEC22C-212ENST00000454141 PTPRTO14522 1441 aa28.87■■■□□ 2.21
SEC22C-212ENST00000454141 KIF3BO15066 747 aa28.87■■■□□ 2.21
SEC22C-212ENST00000454141 MIA2Q96PC5 1412 aa28.86■■■□□ 2.21
SEC22C-212ENST00000454141 MYO3AQ8NEV4 1616 aa28.86■■■□□ 2.21
SEC22C-212ENST00000454141 FAM135AQ9P2D6 1515 aa28.84■■■□□ 2.21
SEC22C-212ENST00000454141 CAMSAP1Q5T5Y3 1602 aa28.83■■■□□ 2.21
SEC22C-212ENST00000454141 KDM5DQ9BY66 1539 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms