RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SNPHO15079 494 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 NKX1-1Q15270 411 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 TMEM92Q6UXU6 159 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 MICALL2Q8IY33 904 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 MARVELD3Q96A59 401 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 STK24Q9Y6E0 443 aa8.62□□□□□ -1.03
HMGB1P15-201ENST00000453854 STK25O00506 426 aa8.61□□□□□ -1.03
HMGB1P15-201ENST00000453854 G3V3G9 751 aa8.6□□□□□ -1.03
HMGB1P15-201ENST00000453854 HOXB3P14651 431 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P15-201ENST00000453854 CDAN1Q8IWY9 1227 aa8.6□□□□□ -1.03
HMGB1P15-201ENST00000453854 MFRPQ9BY79 579 aa8.6□□□□□ -1.03
HMGB1P15-201ENST00000453854 GTPBP6O43824 516 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P15-201ENST00000453854 NLRP6P59044 892 aa8.56□□□□□ -1.04
HMGB1P15-201ENST00000453854 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
HMGB1P15-201ENST00000453854 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
HMGB1P15-201ENST00000453854 EMP3P54852 163 aa8.51□□□□□ -1.05
HMGB1P15-201ENST00000453854 PPP1R37O75864 691 aa8.49□□□□□ -1.05
HMGB1P15-201ENST00000453854 RYDENQ9NUL5 291 aaKnown RBP8.49□□□□□ -1.05
HMGB1P15-201ENST00000453854 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
HMGB1P15-201ENST00000453854 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
HMGB1P15-201ENST00000453854 PRKCSHP14314 528 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P15-201ENST00000453854 DOK7Q18PE1 504 aa8.47□□□□□ -1.05
HMGB1P15-201ENST00000453854 HOXB1P14653 301 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P15-201ENST00000453854 KIF3CO14782 793 aa8.45□□□□□ -1.06
HMGB1P15-201ENST00000453854 ZNF710Q8N1W2 664 aa8.45□□□□□ -1.06
HMGB1P15-201ENST00000453854 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
HMGB1P15-201ENST00000453854 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
HMGB1P15-201ENST00000453854 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
HMGB1P15-201ENST00000453854 GPR153Q6NV75 609 aa8.42□□□□□ -1.06
HMGB1P15-201ENST00000453854 SPNS2Q8IVW8 549 aa8.4□□□□□ -1.06
HMGB1P15-201ENST00000453854 KHSRPQ92945 711 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB1P15-201ENST00000453854 RIMBP2O15034 1052 aa8.39□□□□□ -1.07
HMGB1P15-201ENST00000453854 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
HMGB1P15-201ENST00000453854 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
HMGB1P15-201ENST00000453854 NBR1Q14596 966 aa8.38□□□□□ -1.07
HMGB1P15-201ENST00000453854 ZSWIM6Q9HCJ5 1215 aa8.38□□□□□ -1.07
HMGB1P15-201ENST00000453854 ERBB3P21860 1342 aa8.37□□□□□ -1.07
HMGB1P15-201ENST00000453854 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
HMGB1P15-201ENST00000453854 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
HMGB1P15-201ENST00000453854 TMC2Q8TDI7 906 aa8.33□□□□□ -1.08
HMGB1P15-201ENST00000453854 CADPS2Q86UW7 1296 aa8.3□□□□□ -1.08
HMGB1P15-201ENST00000453854 SLC34A2O95436 690 aa8.29□□□□□ -1.08
HMGB1P15-201ENST00000453854 NUDT7P0C024 238 aa8.29□□□□□ -1.08
HMGB1P15-201ENST00000453854 PCDHGA4Q9Y5G9 962 aa8.29□□□□□ -1.08
HMGB1P15-201ENST00000453854 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P15-201ENST00000453854 ZNF687Q8N1G0 1237 aa8.28□□□□□ -1.08
HMGB1P15-201ENST00000453854 P3H3Q8IVL6 736 aa8.27□□□□□ -1.09
HMGB1P15-201ENST00000453854 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P15-201ENST00000453854 FOXK1P85037 733 aa8.26□□□□□ -1.09
HMGB1P15-201ENST00000453854 DSG2Q14126 1118 aa8.26□□□□□ -1.09
HMGB1P15-201ENST00000453854 PLPP6Q8IY26 295 aa8.25□□□□□ -1.09
HMGB1P15-201ENST00000453854 LHX6Q9UPM6 363 aa8.25□□□□□ -1.09
HMGB1P15-201ENST00000453854 KDM4FA0A1W2PPD8 638 aa8.24□□□□□ -1.09
HMGB1P15-201ENST00000453854 POTEEQ6S8J3 1075 aa8.23□□□□□ -1.09
HMGB1P15-201ENST00000453854 KCNV2Q8TDN2 545 aa8.22□□□□□ -1.09
HMGB1P15-201ENST00000453854 PTCD2Q8WV60 388 aaKnown RBP8.22□□□□□ -1.09
HMGB1P15-201ENST00000453854 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
HMGB1P15-201ENST00000453854 CRISPLD2Q9H0B8 497 aa8.21□□□□□ -1.1
HMGB1P15-201ENST00000453854 NCKAP5LQ9HCH0 1330 aa8.21□□□□□ -1.1
HMGB1P15-201ENST00000453854 AXIN2Q9Y2T1 843 aa8.18□□□□□ -1.1
HMGB1P15-201ENST00000453854 LSM11P83369 360 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGB1P15-201ENST00000453854 ANKRD13DQ6ZTN6 518 aa8.16□□□□□ -1.1
HMGB1P15-201ENST00000453854 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
HMGB1P15-201ENST00000453854 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
HMGB1P15-201ENST00000453854 ARHGEF1Q92888 912 aaKnown RBP8.15□□□□□ -1.1
HMGB1P15-201ENST00000453854 UPF1Q92900 1129 aaKnown RBP eCLIP8.14□□□□□ -1.11
HMGB1P15-201ENST00000453854 E2F4Q16254 413 aa8.13□□□□□ -1.11
HMGB1P15-201ENST00000453854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGB1P15-201ENST00000453854 RNF166Q96A37 237 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P15-201ENST00000453854 MYT1LQ9UL68 1186 aa8.12□□□□□ -1.11
HMGB1P15-201ENST00000453854 PDE4AP27815 886 aa8.11□□□□□ -1.11
HMGB1P15-201ENST00000453854 PBX2P40425 430 aa8.11□□□□□ -1.11
HMGB1P15-201ENST00000453854 MFSD10Q14728 455 aa8.11□□□□□ -1.11
HMGB1P15-201ENST00000453854 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
HMGB1P15-201ENST00000453854 TBC1D12O60347 775 aa8.09□□□□□ -1.11
HMGB1P15-201ENST00000453854 PSEN2P49810 448 aa8.09□□□□□ -1.11
HMGB1P15-201ENST00000453854 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
HMGB1P15-201ENST00000453854 PSDA5PKW4 1024 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P15-201ENST00000453854 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
HMGB1P15-201ENST00000453854 LMOD2Q6P5Q4 547 aa8.08□□□□□ -1.12
HMGB1P15-201ENST00000453854 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P15-201ENST00000453854 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
HMGB1P15-201ENST00000453854 TESPA1A2RU30 521 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P15-201ENST00000453854 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
HMGB1P15-201ENST00000453854 PTGER2P43116 358 aa8.05□□□□□ -1.12
HMGB1P15-201ENST00000453854 CAMK2BQ13554 666 aa8.05□□□□□ -1.12
HMGB1P15-201ENST00000453854 PPP4R3BQ5MIZ7 849 aa8.05□□□□□ -1.12
HMGB1P15-201ENST00000453854 ADGRD1Q6QNK2 874 aa8.05□□□□□ -1.12
HMGB1P15-201ENST00000453854 SEMA3EO15041 775 aa8.03□□□□□ -1.12
HMGB1P15-201ENST00000453854 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
HMGB1P15-201ENST00000453854 ANO8Q9HCE9 1232 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P15-201ENST00000453854 TULP1O00294 542 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P15-201ENST00000453854 EVI5O60447 810 aa8.02□□□□□ -1.13
HMGB1P15-201ENST00000453854 FOSBP53539 338 aa8.02□□□□□ -1.13
HMGB1P15-201ENST00000453854 KCNK17Q96T54 332 aa8.02□□□□□ -1.13
HMGB1P15-201ENST00000453854 HRO43593 1189 aa8.01□□□□□ -1.13
HMGB1P15-201ENST00000453854 TK2O00142 265 aa7.99□□□□□ -1.13
HMGB1P15-201ENST00000453854 MAP3K9P80192 1104 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms