RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 DENND4BO75064 1496 aaPredicted RBP23.27■■□□□ 1.32
VPS16-205ENST00000453689 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
VPS16-205ENST00000453689 RAPGEF3O95398 923 aa23.26■■□□□ 1.31
VPS16-205ENST00000453689 EFCAB2Q5VUJ9 269 aa23.24■■□□□ 1.31
VPS16-205ENST00000453689 SUPT6HQ7KZ85 1726 aaKnown RBP23.24■■□□□ 1.31
VPS16-205ENST00000453689 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
VPS16-205ENST00000453689 ZMYM4Q5VZL5 1548 aa23.22■■□□□ 1.31
VPS16-205ENST00000453689 SCAPERQ9BY12 1400 aa23.21■■□□□ 1.31
VPS16-205ENST00000453689 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
VPS16-205ENST00000453689 GPATCH8Q9UKJ3 1502 aaKnown RBP23.2■■□□□ 1.3
VPS16-205ENST00000453689 POGZQ7Z3K3 1410 aa23.19■■□□□ 1.3
VPS16-205ENST00000453689 ABCC1P33527 1531 aa23.18■■□□□ 1.3
VPS16-205ENST00000453689 SAMD9LQ8IVG5 1584 aa23.18■■□□□ 1.3
VPS16-205ENST00000453689 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
VPS16-205ENST00000453689 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
VPS16-205ENST00000453689 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
VPS16-205ENST00000453689 KDM5CP41229 1560 aa23.14■■□□□ 1.29
VPS16-205ENST00000453689 ZFYVE16Q7Z3T8 1539 aa23.13■■□□□ 1.29
VPS16-205ENST00000453689 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
VPS16-205ENST00000453689 ZNF518AQ6AHZ1 1483 aa23.12■■□□□ 1.29
VPS16-205ENST00000453689 ARHGEF12Q9NZN5 1544 aa23.12■■□□□ 1.29
VPS16-205ENST00000453689 KDM4FA0A1W2PPD8 638 aa23.11■■□□□ 1.29
VPS16-205ENST00000453689 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
VPS16-205ENST00000453689 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
VPS16-205ENST00000453689 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
VPS16-205ENST00000453689 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
VPS16-205ENST00000453689 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.28
VPS16-205ENST00000453689 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
VPS16-205ENST00000453689 ZNF777Q9ULD5 760 aaPredicted RBP23.07■■□□□ 1.28
VPS16-205ENST00000453689 KANK4Q5T7N3 995 aaPredicted RBP23.06■■□□□ 1.28
VPS16-205ENST00000453689 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
VPS16-205ENST00000453689 TRAPPC8Q9Y2L5 1435 aa23.06■■□□□ 1.28
VPS16-205ENST00000453689 AFAP1Q8N556 730 aa23.05■■□□□ 1.28
VPS16-205ENST00000453689 BCORL1Q5H9F3 1711 aa23.05■■□□□ 1.28
VPS16-205ENST00000453689 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
VPS16-205ENST00000453689 PLEKHH2Q8IVE3 1493 aa23.04■■□□□ 1.28
VPS16-205ENST00000453689 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
VPS16-205ENST00000453689 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
VPS16-205ENST00000453689 ADAMTSL3P82987 1691 aa23.01■■□□□ 1.27
VPS16-205ENST00000453689 APLP2Q06481 763 aa23.01■■□□□ 1.27
VPS16-205ENST00000453689 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
VPS16-205ENST00000453689 MLH3Q9UHC1 1453 aa23■■□□□ 1.27
VPS16-205ENST00000453689 HNRNPMP52272 730 aaKnown RBP eCLIP22.98■■□□□ 1.27
VPS16-205ENST00000453689 ATP10AO60312 1499 aa22.98■■□□□ 1.27
VPS16-205ENST00000453689 ZNF644Q9H582 1327 aaPredicted RBP22.97■■□□□ 1.27
VPS16-205ENST00000453689 CAMSAP2Q08AD1 1489 aa22.97■■□□□ 1.27
VPS16-205ENST00000453689 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
VPS16-205ENST00000453689 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
VPS16-205ENST00000453689 REREQ9P2R6 1566 aa22.94■■□□□ 1.26
VPS16-205ENST00000453689 MYT1LQ9UL68 1186 aa22.94■■□□□ 1.26
VPS16-205ENST00000453689 MADDQ8WXG6 1647 aa22.93■■□□□ 1.26
VPS16-205ENST00000453689 MBD5Q9P267 1494 aa22.93■■□□□ 1.26
VPS16-205ENST00000453689 ARID4BQ4LE39 1312 aaPredicted RBP22.93■■□□□ 1.26
VPS16-205ENST00000453689 ATP7AQ04656 1500 aa22.92■■□□□ 1.26
VPS16-205ENST00000453689 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
VPS16-205ENST00000453689 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
VPS16-205ENST00000453689 RIMS1Q86UR5 1692 aaKnown RBP22.9■■□□□ 1.26
VPS16-205ENST00000453689 ARHGEF5Q12774 1597 aa22.89■■□□□ 1.26
VPS16-205ENST00000453689 SPAG9O60271 1321 aaKnown RBP22.88■■□□□ 1.25
VPS16-205ENST00000453689 ADGBQ8N7X0 1667 aa22.88■■□□□ 1.25
VPS16-205ENST00000453689 MIA2Q96PC5 1412 aa22.88■■□□□ 1.25
VPS16-205ENST00000453689 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
VPS16-205ENST00000453689 PTPN23Q9H3S7 1636 aa22.86■■□□□ 1.25
VPS16-205ENST00000453689 AGLP35573 1532 aa22.83■■□□□ 1.25
VPS16-205ENST00000453689 CROCC2H7BZ55 1655 aa22.82■■□□□ 1.24
VPS16-205ENST00000453689 PLXNC1O60486 1568 aa22.81■■□□□ 1.24
VPS16-205ENST00000453689 PTPRMP28827 1452 aa22.8■■□□□ 1.24
VPS16-205ENST00000453689 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
VPS16-205ENST00000453689 MLECQ14165 292 aa22.79■■□□□ 1.24
VPS16-205ENST00000453689 FGD6Q6ZV73 1430 aa22.79■■□□□ 1.24
VPS16-205ENST00000453689 MAST1Q9Y2H9 1570 aa22.79■■□□□ 1.24
VPS16-205ENST00000453689 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
VPS16-205ENST00000453689 A2MP01023 1474 aa22.78■■□□□ 1.24
VPS16-205ENST00000453689 TCOF1Q13428 1488 aaKnown RBP22.76■■□□□ 1.23
VPS16-205ENST00000453689 DNMT1P26358 1616 aaKnown RBP22.75■■□□□ 1.23
VPS16-205ENST00000453689 TSPY4P0CV99 314 aa22.7■■□□□ 1.22
VPS16-205ENST00000453689 TSPY10P0CW01 314 aa22.7■■□□□ 1.22
VPS16-205ENST00000453689 C3P01024 1663 aa22.69■■□□□ 1.22
VPS16-205ENST00000453689 MROH2AA6NES4 1674 aa22.67■■□□□ 1.22
VPS16-205ENST00000453689 CLTCQ00610 1675 aaKnown RBP22.67■■□□□ 1.22
VPS16-205ENST00000453689 SHANK2Q9UPX8 1470 aa22.66■■□□□ 1.22
VPS16-205ENST00000453689 ABCC5O15440 1437 aa22.66■■□□□ 1.22
VPS16-205ENST00000453689 DAPK1P53355 1430 aa22.66■■□□□ 1.22
VPS16-205ENST00000453689 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
VPS16-205ENST00000453689 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
VPS16-205ENST00000453689 EIF2AK4Q9P2K8 1649 aaKnown RBP22.62■■□□□ 1.21
VPS16-205ENST00000453689 PLPPR3Q6T4P5 718 aa22.6■■□□□ 1.21
VPS16-205ENST00000453689 SETD1BQ9UPS6 1966 aaKnown RBP22.59■■□□□ 1.21
VPS16-205ENST00000453689 CNTLNQ9NXG0 1405 aa22.59■■□□□ 1.21
VPS16-205ENST00000453689 RNF17Q9BXT8 1623 aaKnown RBP22.59■■□□□ 1.21
VPS16-205ENST00000453689 PREX1Q8TCU6 1659 aa22.58■■□□□ 1.21
VPS16-205ENST00000453689 DUOX2Q9NRD8 1548 aa22.58■■□□□ 1.21
VPS16-205ENST00000453689 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.21
VPS16-205ENST00000453689 GGT6Q6P531 493 aa22.57■■□□□ 1.2
VPS16-205ENST00000453689 ESF1Q9H501 851 aaKnown RBP22.57■■□□□ 1.2
VPS16-205ENST00000453689 KIF3BO15066 747 aa22.55■■□□□ 1.2
VPS16-205ENST00000453689 CEBPAP49715 358 aaPredicted RBP22.55■■□□□ 1.2
VPS16-205ENST00000453689 KIF15Q9NS87 1388 aa22.53■■□□□ 1.2
VPS16-205ENST00000453689 LMTK3Q96Q04 1460 aa22.53■■□□□ 1.2
VPS16-205ENST00000453689 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms