RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 ARID4BQ4LE39 1312 aaPredicted RBP27.5■■□□□ 1.99
TNFRSF4-202ENST00000453580 ARHGAP5Q13017 1502 aa27.5■■□□□ 1.99
TNFRSF4-202ENST00000453580 POGZQ7Z3K3 1410 aa27.49■■□□□ 1.99
TNFRSF4-202ENST00000453580 ZFYVE16Q7Z3T8 1539 aa27.48■■□□□ 1.99
TNFRSF4-202ENST00000453580 ADAMTSL3P82987 1691 aa27.46■■□□□ 1.99
TNFRSF4-202ENST00000453580 BCORL1Q5H9F3 1711 aa27.44■■□□□ 1.98
TNFRSF4-202ENST00000453580 ZNF518AQ6AHZ1 1483 aa27.43■■□□□ 1.98
TNFRSF4-202ENST00000453580 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
TNFRSF4-202ENST00000453580 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
TNFRSF4-202ENST00000453580 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
TNFRSF4-202ENST00000453580 PTPRMP28827 1452 aa27.36■■□□□ 1.97
TNFRSF4-202ENST00000453580 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
TNFRSF4-202ENST00000453580 ATP10AO60312 1499 aa27.34■■□□□ 1.97
TNFRSF4-202ENST00000453580 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
TNFRSF4-202ENST00000453580 KDM5CP41229 1560 aa27.33■■□□□ 1.97
TNFRSF4-202ENST00000453580 HECW2Q9P2P5 1572 aa27.33■■□□□ 1.97
TNFRSF4-202ENST00000453580 MADDQ8WXG6 1647 aa27.32■■□□□ 1.96
TNFRSF4-202ENST00000453580 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
TNFRSF4-202ENST00000453580 C9orf84Q5VXU9 1444 aa27.32■■□□□ 1.96
TNFRSF4-202ENST00000453580 MYT1LQ9UL68 1186 aa27.31■■□□□ 1.96
TNFRSF4-202ENST00000453580 ABCC1P33527 1531 aa27.29■■□□□ 1.96
TNFRSF4-202ENST00000453580 AFAP1Q8N556 730 aa27.27■■□□□ 1.96
TNFRSF4-202ENST00000453580 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
TNFRSF4-202ENST00000453580 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
TNFRSF4-202ENST00000453580 RIMS1Q86UR5 1692 aaKnown RBP27.25■■□□□ 1.95
TNFRSF4-202ENST00000453580 CCNB3Q8WWL7 1395 aa27.24■■□□□ 1.95
TNFRSF4-202ENST00000453580 GPATCH8Q9UKJ3 1502 aaKnown RBP27.23■■□□□ 1.95
TNFRSF4-202ENST00000453580 PLEKHH2Q8IVE3 1493 aa27.23■■□□□ 1.95
TNFRSF4-202ENST00000453580 EHBP1L1Q8N3D4 1523 aa27.22■■□□□ 1.95
TNFRSF4-202ENST00000453580 CFDP1Q9UEE9 299 aaPredicted RBP27.21■■□□□ 1.95
TNFRSF4-202ENST00000453580 REREQ9P2R6 1566 aa27.21■■□□□ 1.95
TNFRSF4-202ENST00000453580 ZNF777Q9ULD5 760 aaPredicted RBP27.2■■□□□ 1.94
TNFRSF4-202ENST00000453580 FER1L4A9Z1Z3 1794 aa27.2■■□□□ 1.94
TNFRSF4-202ENST00000453580 SIGLEC1Q9BZZ2 1709 aa27.18■■□□□ 1.94
TNFRSF4-202ENST00000453580 DIP2CQ9Y2E4 1556 aa27.18■■□□□ 1.94
TNFRSF4-202ENST00000453580 TRAPPC8Q9Y2L5 1435 aa27.17■■□□□ 1.94
TNFRSF4-202ENST00000453580 MLECQ14165 292 aa27.17■■□□□ 1.94
TNFRSF4-202ENST00000453580 KIAA1107Q9UPP5 1409 aa27.16■■□□□ 1.94
TNFRSF4-202ENST00000453580 ARHGEF12Q9NZN5 1544 aa27.16■■□□□ 1.94
TNFRSF4-202ENST00000453580 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
TNFRSF4-202ENST00000453580 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
TNFRSF4-202ENST00000453580 SYCP2Q9BX26 1530 aa27.12■■□□□ 1.93
TNFRSF4-202ENST00000453580 AGLP35573 1532 aa27.11■■□□□ 1.93
TNFRSF4-202ENST00000453580 KIDINS220Q9ULH0 1771 aa27.1■■□□□ 1.93
TNFRSF4-202ENST00000453580 VPS8Q8N3P4 1428 aa27.1■■□□□ 1.93
TNFRSF4-202ENST00000453580 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
TNFRSF4-202ENST00000453580 SPAG9O60271 1321 aaKnown RBP27.1■■□□□ 1.93
TNFRSF4-202ENST00000453580 SUPT6HQ7KZ85 1726 aaKnown RBP27.1■■□□□ 1.93
TNFRSF4-202ENST00000453580 TIAM1Q13009 1591 aa27.08■■□□□ 1.93
TNFRSF4-202ENST00000453580 HNRNPMP52272 730 aaKnown RBP eCLIP27.07■■□□□ 1.92
TNFRSF4-202ENST00000453580 ESF1Q9H501 851 aaKnown RBP27.07■■□□□ 1.92
TNFRSF4-202ENST00000453580 ATP7AQ04656 1500 aa27.02■■□□□ 1.92
TNFRSF4-202ENST00000453580 LMTK3Q96Q04 1460 aa27.02■■□□□ 1.92
TNFRSF4-202ENST00000453580 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
TNFRSF4-202ENST00000453580 NCOA2Q15596 1464 aa27■■□□□ 1.91
TNFRSF4-202ENST00000453580 MAP3K1Q13233 1512 aa27■■□□□ 1.91
TNFRSF4-202ENST00000453580 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
TNFRSF4-202ENST00000453580 INO80Q9ULG1 1556 aaPredicted RBP26.99■■□□□ 1.91
TNFRSF4-202ENST00000453580 SETD1BQ9UPS6 1966 aaKnown RBP26.98■■□□□ 1.91
TNFRSF4-202ENST00000453580 CNTLNQ9NXG0 1405 aa26.98■■□□□ 1.91
TNFRSF4-202ENST00000453580 PREX1Q8TCU6 1659 aa26.95■■□□□ 1.91
TNFRSF4-202ENST00000453580 LRRC9Q6ZRR7 1453 aa26.95■■□□□ 1.91
TNFRSF4-202ENST00000453580 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.9
TNFRSF4-202ENST00000453580 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
TNFRSF4-202ENST00000453580 A2MP01023 1474 aa26.93■■□□□ 1.9
TNFRSF4-202ENST00000453580 APLP2Q06481 763 aa26.92■■□□□ 1.9
TNFRSF4-202ENST00000453580 MBD5Q9P267 1494 aa26.92■■□□□ 1.9
TNFRSF4-202ENST00000453580 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF4-202ENST00000453580 PLXNC1O60486 1568 aa26.88■■□□□ 1.89
TNFRSF4-202ENST00000453580 CAMSAP2Q08AD1 1489 aa26.88■■□□□ 1.89
TNFRSF4-202ENST00000453580 CCDC141Q6ZP82 1450 aa26.88■■□□□ 1.89
TNFRSF4-202ENST00000453580 CEBPAP49715 358 aaPredicted RBP26.88■■□□□ 1.89
TNFRSF4-202ENST00000453580 PPP6R1Q9UPN7 881 aa26.88■■□□□ 1.89
TNFRSF4-202ENST00000453580 C3P01024 1663 aa26.88■■□□□ 1.89
TNFRSF4-202ENST00000453580 MROH2AA6NES4 1674 aa26.87■■□□□ 1.89
TNFRSF4-202ENST00000453580 UHRF1BP1Q6BDS2 1440 aa26.86■■□□□ 1.89
TNFRSF4-202ENST00000453580 ARHGEF5Q12774 1597 aa26.84■■□□□ 1.89
TNFRSF4-202ENST00000453580 TSPY4P0CV99 314 aa26.83■■□□□ 1.89
TNFRSF4-202ENST00000453580 TSPY10P0CW01 314 aa26.83■■□□□ 1.89
TNFRSF4-202ENST00000453580 HSPA2P54652 639 aa26.83■■□□□ 1.89
TNFRSF4-202ENST00000453580 MIA2Q96PC5 1412 aa26.81■■□□□ 1.88
TNFRSF4-202ENST00000453580 DHX29Q7Z478 1369 aaKnown RBP26.8■■□□□ 1.88
TNFRSF4-202ENST00000453580 DMRT2Q9Y5R5 561 aa26.78■■□□□ 1.88
TNFRSF4-202ENST00000453580 NPATQ14207 1427 aa26.78■■□□□ 1.88
TNFRSF4-202ENST00000453580 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
TNFRSF4-202ENST00000453580 GGT6Q6P531 493 aa26.77■■□□□ 1.88
TNFRSF4-202ENST00000453580 ZMYM3Q14202 1370 aa26.76■■□□□ 1.87
TNFRSF4-202ENST00000453580 KANK4Q5T7N3 995 aaPredicted RBP26.76■■□□□ 1.87
TNFRSF4-202ENST00000453580 ILDR1Q86SU0 546 aaPredicted RBP26.75■■□□□ 1.87
TNFRSF4-202ENST00000453580 CLTCQ00610 1675 aaKnown RBP26.75■■□□□ 1.87
TNFRSF4-202ENST00000453580 FAM135AQ9P2D6 1515 aa26.73■■□□□ 1.87
TNFRSF4-202ENST00000453580 MAST1Q9Y2H9 1570 aa26.69■■□□□ 1.86
TNFRSF4-202ENST00000453580 KIF3BO15066 747 aa26.68■■□□□ 1.86
TNFRSF4-202ENST00000453580 FBXO41Q8TF61 875 aa26.64■■□□□ 1.86
TNFRSF4-202ENST00000453580 STRCQ7RTU9 1775 aa26.61■■□□□ 1.85
TNFRSF4-202ENST00000453580 KDM5DQ9BY66 1539 aa26.61■■□□□ 1.85
TNFRSF4-202ENST00000453580 PTPRKQ15262 1439 aa26.6■■□□□ 1.85
TNFRSF4-202ENST00000453580 WASHC2CQ9Y4E1 1318 aa26.6■■□□□ 1.85
TNFRSF4-202ENST00000453580 EIF2AK4Q9P2K8 1649 aaKnown RBP26.59■■□□□ 1.85
TNFRSF4-202ENST00000453580 PTPN23Q9H3S7 1636 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms