RNA–Protein interactions for RNA: ENST00000453187.1

LINC01287-202, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 3

Gene LINC01287, Length 430 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-202ENST00000453187 PLCH2O75038 1416 aa17.14■□□□□ 0.33
LINC01287-202ENST00000453187 ZMYM4Q5VZL5 1548 aa17.13■□□□□ 0.33
LINC01287-202ENST00000453187 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
LINC01287-202ENST00000453187 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
LINC01287-202ENST00000453187 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
LINC01287-202ENST00000453187 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
LINC01287-202ENST00000453187 SCAPERQ9BY12 1400 aa17.09■□□□□ 0.33
LINC01287-202ENST00000453187 SIGLEC1Q9BZZ2 1709 aa17.09■□□□□ 0.33
LINC01287-202ENST00000453187 ABCC1P33527 1531 aa17.08■□□□□ 0.32
LINC01287-202ENST00000453187 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
LINC01287-202ENST00000453187 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
LINC01287-202ENST00000453187 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
LINC01287-202ENST00000453187 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
LINC01287-202ENST00000453187 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
LINC01287-202ENST00000453187 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
LINC01287-202ENST00000453187 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
LINC01287-202ENST00000453187 EFCAB2Q5VUJ9 269 aa17.04■□□□□ 0.32
LINC01287-202ENST00000453187 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
LINC01287-202ENST00000453187 KDM5CP41229 1560 aa17.03■□□□□ 0.32
LINC01287-202ENST00000453187 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
LINC01287-202ENST00000453187 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
LINC01287-202ENST00000453187 RIMS1Q86UR5 1692 aaKnown RBP17.03■□□□□ 0.32
LINC01287-202ENST00000453187 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.32
LINC01287-202ENST00000453187 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
LINC01287-202ENST00000453187 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
LINC01287-202ENST00000453187 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
LINC01287-202ENST00000453187 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
LINC01287-202ENST00000453187 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
LINC01287-202ENST00000453187 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
LINC01287-202ENST00000453187 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
LINC01287-202ENST00000453187 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
LINC01287-202ENST00000453187 GPATCH8Q9UKJ3 1502 aaKnown RBP16.98■□□□□ 0.31
LINC01287-202ENST00000453187 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
LINC01287-202ENST00000453187 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
LINC01287-202ENST00000453187 CCNB3Q8WWL7 1395 aa16.97■□□□□ 0.31
LINC01287-202ENST00000453187 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
LINC01287-202ENST00000453187 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
LINC01287-202ENST00000453187 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
LINC01287-202ENST00000453187 PTPRMP28827 1452 aa16.93■□□□□ 0.3
LINC01287-202ENST00000453187 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
LINC01287-202ENST00000453187 ATP10AO60312 1499 aa16.92■□□□□ 0.3
LINC01287-202ENST00000453187 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
LINC01287-202ENST00000453187 MLECQ14165 292 aa16.91■□□□□ 0.3
LINC01287-202ENST00000453187 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
LINC01287-202ENST00000453187 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
LINC01287-202ENST00000453187 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
LINC01287-202ENST00000453187 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
LINC01287-202ENST00000453187 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
LINC01287-202ENST00000453187 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
LINC01287-202ENST00000453187 MLH3Q9UHC1 1453 aa16.88■□□□□ 0.29
LINC01287-202ENST00000453187 REREQ9P2R6 1566 aa16.88■□□□□ 0.29
LINC01287-202ENST00000453187 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
LINC01287-202ENST00000453187 HNRNPMP52272 730 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC01287-202ENST00000453187 MAP3K1Q13233 1512 aa16.83■□□□□ 0.28
LINC01287-202ENST00000453187 ADGBQ8N7X0 1667 aa16.83■□□□□ 0.28
LINC01287-202ENST00000453187 ZNF644Q9H582 1327 aaPredicted RBP16.83■□□□□ 0.28
LINC01287-202ENST00000453187 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
LINC01287-202ENST00000453187 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
LINC01287-202ENST00000453187 SPAG9O60271 1321 aaKnown RBP16.81■□□□□ 0.28
LINC01287-202ENST00000453187 PLXNC1O60486 1568 aa16.8■□□□□ 0.28
LINC01287-202ENST00000453187 AGLP35573 1532 aa16.8■□□□□ 0.28
LINC01287-202ENST00000453187 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
LINC01287-202ENST00000453187 CCDC141Q6ZP82 1450 aa16.79■□□□□ 0.28
LINC01287-202ENST00000453187 MBD5Q9P267 1494 aa16.78■□□□□ 0.28
LINC01287-202ENST00000453187 C3P01024 1663 aa16.78■□□□□ 0.28
LINC01287-202ENST00000453187 APLP2Q06481 763 aa16.76■□□□□ 0.27
LINC01287-202ENST00000453187 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
LINC01287-202ENST00000453187 PREX1Q8TCU6 1659 aa16.75■□□□□ 0.27
LINC01287-202ENST00000453187 A2MP01023 1474 aa16.75■□□□□ 0.27
LINC01287-202ENST00000453187 LMTK3Q96Q04 1460 aa16.75■□□□□ 0.27
LINC01287-202ENST00000453187 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
LINC01287-202ENST00000453187 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
LINC01287-202ENST00000453187 CROCC2H7BZ55 1655 aa16.74■□□□□ 0.27
LINC01287-202ENST00000453187 PTPN23Q9H3S7 1636 aa16.73■□□□□ 0.27
LINC01287-202ENST00000453187 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
LINC01287-202ENST00000453187 CEBPAP49715 358 aaPredicted RBP16.69■□□□□ 0.26
LINC01287-202ENST00000453187 ESF1Q9H501 851 aaKnown RBP16.69■□□□□ 0.26
LINC01287-202ENST00000453187 RTEL1-TNFRSF6BF6WH68 1400 aa16.68■□□□□ 0.26
LINC01287-202ENST00000453187 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
LINC01287-202ENST00000453187 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
LINC01287-202ENST00000453187 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
LINC01287-202ENST00000453187 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
LINC01287-202ENST00000453187 HSPA2P54652 639 aa16.64■□□□□ 0.25
LINC01287-202ENST00000453187 FGD6Q6ZV73 1430 aa16.63■□□□□ 0.25
LINC01287-202ENST00000453187 GGT6Q6P531 493 aa16.63■□□□□ 0.25
LINC01287-202ENST00000453187 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
LINC01287-202ENST00000453187 MYO3AQ8NEV4 1616 aa16.62■□□□□ 0.25
LINC01287-202ENST00000453187 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
LINC01287-202ENST00000453187 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
LINC01287-202ENST00000453187 TSPY4P0CV99 314 aa16.6■□□□□ 0.25
LINC01287-202ENST00000453187 TSPY10P0CW01 314 aa16.6■□□□□ 0.25
LINC01287-202ENST00000453187 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
LINC01287-202ENST00000453187 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
LINC01287-202ENST00000453187 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
LINC01287-202ENST00000453187 SHANK2Q9UPX8 1470 aa16.59■□□□□ 0.25
LINC01287-202ENST00000453187 CEP152O94986 1710 aa16.59■□□□□ 0.25
LINC01287-202ENST00000453187 RSPH4AQ5TD94 716 aa16.58■□□□□ 0.24
LINC01287-202ENST00000453187 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
LINC01287-202ENST00000453187 DAPK1P53355 1430 aa16.58■□□□□ 0.24
LINC01287-202ENST00000453187 ZNF142P52746 1687 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms