RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 LRRIQ1Q96JM4 1722 aa12.25□□□□□ -0.45
HDLBP-226ENST00000453141 MAGI2Q86UL8 1455 aa12.24□□□□□ -0.45
HDLBP-226ENST00000453141 MADDQ8WXG6 1647 aa12.24□□□□□ -0.45
HDLBP-226ENST00000453141 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
HDLBP-226ENST00000453141 CASKIN1Q8WXD9 1431 aa12.23□□□□□ -0.45
HDLBP-226ENST00000453141 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
HDLBP-226ENST00000453141 YEATS2Q9ULM3 1422 aa12.22□□□□□ -0.45
HDLBP-226ENST00000453141 EFCAB2Q5VUJ9 269 aa12.21□□□□□ -0.45
HDLBP-226ENST00000453141 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
HDLBP-226ENST00000453141 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
HDLBP-226ENST00000453141 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
HDLBP-226ENST00000453141 SIGLEC1Q9BZZ2 1709 aa12.2□□□□□ -0.46
HDLBP-226ENST00000453141 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
HDLBP-226ENST00000453141 PREX2Q70Z35 1606 aa12.17□□□□□ -0.46
HDLBP-226ENST00000453141 KDM5CP41229 1560 aa12.17□□□□□ -0.46
HDLBP-226ENST00000453141 ATP10AO60312 1499 aa12.16□□□□□ -0.46
HDLBP-226ENST00000453141 C9orf84Q5VXU9 1444 aa12.16□□□□□ -0.46
HDLBP-226ENST00000453141 CDC42BPBQ9Y5S2 1711 aa12.16□□□□□ -0.46
HDLBP-226ENST00000453141 LOC105371045A0A1W2PR82 267 aa12.14□□□□□ -0.47
HDLBP-226ENST00000453141 ABCC1P33527 1531 aa12.14□□□□□ -0.47
HDLBP-226ENST00000453141 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
HDLBP-226ENST00000453141 FER1L4A9Z1Z3 1794 aa12.13□□□□□ -0.47
HDLBP-226ENST00000453141 AFAP1Q8N556 730 aa12.13□□□□□ -0.47
HDLBP-226ENST00000453141 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
HDLBP-226ENST00000453141 MLECQ14165 292 aa12.12□□□□□ -0.47
HDLBP-226ENST00000453141 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-226ENST00000453141 DIP2CQ9Y2E4 1556 aa12.12□□□□□ -0.47
HDLBP-226ENST00000453141 CDC42BPAQ5VT25 1732 aa12.11□□□□□ -0.47
HDLBP-226ENST00000453141 ITSN2Q9NZM3 1697 aa12.11□□□□□ -0.47
HDLBP-226ENST00000453141 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
HDLBP-226ENST00000453141 ABCA6Q8N139 1617 aa12.11□□□□□ -0.47
HDLBP-226ENST00000453141 REREQ9P2R6 1566 aa12.1□□□□□ -0.47
HDLBP-226ENST00000453141 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
HDLBP-226ENST00000453141 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
HDLBP-226ENST00000453141 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
HDLBP-226ENST00000453141 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
HDLBP-226ENST00000453141 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
HDLBP-226ENST00000453141 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
HDLBP-226ENST00000453141 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
HDLBP-226ENST00000453141 AGLP35573 1532 aa12.06□□□□□ -0.48
HDLBP-226ENST00000453141 MTUS2Q5JR59 1369 aa12.05□□□□□ -0.48
HDLBP-226ENST00000453141 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
HDLBP-226ENST00000453141 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-226ENST00000453141 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
HDLBP-226ENST00000453141 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
HDLBP-226ENST00000453141 HSPA2P54652 639 aa12.04□□□□□ -0.48
HDLBP-226ENST00000453141 EHBP1L1Q8N3D4 1523 aa12.04□□□□□ -0.48
HDLBP-226ENST00000453141 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
HDLBP-226ENST00000453141 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-226ENST00000453141 TIAM1Q13009 1591 aa12.02□□□□□ -0.49
HDLBP-226ENST00000453141 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-226ENST00000453141 KIAA1107Q9UPP5 1409 aa12.02□□□□□ -0.49
HDLBP-226ENST00000453141 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
HDLBP-226ENST00000453141 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-226ENST00000453141 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■■■□□ 17.2
HDLBP-226ENST00000453141 SPAG9O60271 1321 aaKnown RBP12.01□□□□□ -0.49
HDLBP-226ENST00000453141 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
HDLBP-226ENST00000453141 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
HDLBP-226ENST00000453141 C3P01024 1663 aa11.99□□□□□ -0.49
HDLBP-226ENST00000453141 CNTLNQ9NXG0 1405 aa11.98□□□□□ -0.49
HDLBP-226ENST00000453141 FBXO41Q8TF61 875 aa11.98□□□□□ -0.49
HDLBP-226ENST00000453141 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
HDLBP-226ENST00000453141 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-226ENST00000453141 A2MP01023 1474 aa11.96□□□□□ -0.49
HDLBP-226ENST00000453141 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
HDLBP-226ENST00000453141 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
HDLBP-226ENST00000453141 ZNF644Q9H582 1327 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-226ENST00000453141 MROH2AA6NES4 1674 aa11.95□□□□□ -0.5
HDLBP-226ENST00000453141 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
HDLBP-226ENST00000453141 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
HDLBP-226ENST00000453141 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
HDLBP-226ENST00000453141 CAMSAP2Q08AD1 1489 aa11.93□□□□□ -0.5
HDLBP-226ENST00000453141 RTEL1-TNFRSF6BF6WH68 1400 aa11.92□□□□□ -0.5
HDLBP-226ENST00000453141 NPATQ14207 1427 aa11.92□□□□□ -0.5
HDLBP-226ENST00000453141 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
HDLBP-226ENST00000453141 CLTCQ00610 1675 aaKnown RBP11.91□□□□□ -0.5
HDLBP-226ENST00000453141 CCDC141Q6ZP82 1450 aa11.91□□□□□ -0.5
HDLBP-226ENST00000453141 SETD1BQ9UPS6 1966 aaKnown RBP11.91□□□□□ -0.5
HDLBP-226ENST00000453141 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
HDLBP-226ENST00000453141 ZMYM3Q14202 1370 aa11.91□□□□□ -0.5
HDLBP-226ENST00000453141 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
HDLBP-226ENST00000453141 GGT6Q6P531 493 aa11.89□□□□□ -0.51
HDLBP-226ENST00000453141 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
HDLBP-226ENST00000453141 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
HDLBP-226ENST00000453141 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
HDLBP-226ENST00000453141 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
HDLBP-226ENST00000453141 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
HDLBP-226ENST00000453141 RSPH4AQ5TD94 716 aa11.87□□□□□ -0.51
HDLBP-226ENST00000453141 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
HDLBP-226ENST00000453141 PTPRTO14522 1441 aa11.86□□□□□ -0.51
HDLBP-226ENST00000453141 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
HDLBP-226ENST00000453141 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-226ENST00000453141 CAMSAP1Q5T5Y3 1602 aa11.86□□□□□ -0.51
HDLBP-226ENST00000453141 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
HDLBP-226ENST00000453141 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-226ENST00000453141 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
HDLBP-226ENST00000453141 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
HDLBP-226ENST00000453141 KIF3BO15066 747 aa11.83□□□□□ -0.52
HDLBP-226ENST00000453141 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
HDLBP-226ENST00000453141 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms