RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 SOX12O15370 315 aa11.4□□□□□ -0.58
VPS8-212ENST00000452666 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
VPS8-212ENST00000452666 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
VPS8-212ENST00000452666 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
VPS8-212ENST00000452666 MS4A4AQ96JQ5 239 aa11.35□□□□□ -0.59
VPS8-212ENST00000452666 PBX2P40425 430 aa11.34□□□□□ -0.59
VPS8-212ENST00000452666 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.595e-7■■□□□ 13.1
VPS8-212ENST00000452666 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
VPS8-212ENST00000452666 PHF8Q9UPP1 1060 aa11.31□□□□□ -0.6
VPS8-212ENST00000452666 RIOK3O14730 519 aaKnown RBP11.26□□□□□ -0.61
VPS8-212ENST00000452666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
VPS8-212ENST00000452666 NUDT7P0C024 238 aa11.24□□□□□ -0.61
VPS8-212ENST00000452666 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
VPS8-212ENST00000452666 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
VPS8-212ENST00000452666 AXIN2Q9Y2T1 843 aa11.22□□□□□ -0.61
VPS8-212ENST00000452666 NLRP6P59044 892 aa11.21□□□□□ -0.61
VPS8-212ENST00000452666 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
VPS8-212ENST00000452666 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
VPS8-212ENST00000452666 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
VPS8-212ENST00000452666 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
VPS8-212ENST00000452666 KIF3CO14782 793 aa11.16□□□□□ -0.62
VPS8-212ENST00000452666 PCDHGA4Q9Y5G9 962 aa11.15□□□□□ -0.62
VPS8-212ENST00000452666 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
VPS8-212ENST00000452666 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
VPS8-212ENST00000452666 SLC34A2O95436 690 aa11.14□□□□□ -0.63
VPS8-212ENST00000452666 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
VPS8-212ENST00000452666 PSDA5PKW4 1024 aaPredicted RBP11.12□□□□□ -0.63
VPS8-212ENST00000452666 TK2O00142 265 aa11.09□□□□□ -0.63
VPS8-212ENST00000452666 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
VPS8-212ENST00000452666 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
VPS8-212ENST00000452666 HRO43593 1189 aa11.05□□□□□ -0.64
VPS8-212ENST00000452666 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
VPS8-212ENST00000452666 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
VPS8-212ENST00000452666 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
VPS8-212ENST00000452666 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
VPS8-212ENST00000452666 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
VPS8-212ENST00000452666 RGS20O76081 388 aa11.01□□□□□ -0.65
VPS8-212ENST00000452666 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
VPS8-212ENST00000452666 PSEN2P49810 448 aa10.99□□□□□ -0.65
VPS8-212ENST00000452666 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
VPS8-212ENST00000452666 PPP4R3BQ5MIZ7 849 aa10.95□□□□□ -0.66
VPS8-212ENST00000452666 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
VPS8-212ENST00000452666 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
VPS8-212ENST00000452666 STK25O00506 426 aa10.93□□□□□ -0.66
VPS8-212ENST00000452666 IFFO2Q5TF58 517 aa10.93□□□□□ -0.66
VPS8-212ENST00000452666 PTCD2Q8WV60 388 aaKnown RBP10.92□□□□□ -0.66
VPS8-212ENST00000452666 PTPN5P54829 565 aa10.9□□□□□ -0.66
VPS8-212ENST00000452666 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
VPS8-212ENST00000452666 A0A0G2JS52 829 aa10.85□□□□□ -0.67
VPS8-212ENST00000452666 TBC1D12O60347 775 aa10.85□□□□□ -0.67
VPS8-212ENST00000452666 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
VPS8-212ENST00000452666 FOXK1P85037 733 aa10.81□□□□□ -0.68
VPS8-212ENST00000452666 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
VPS8-212ENST00000452666 THSD4Q6ZMP0 1018 aa10.8□□□□□ -0.68
VPS8-212ENST00000452666 PPP1R37O75864 691 aa10.78□□□□□ -0.68
VPS8-212ENST00000452666 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
VPS8-212ENST00000452666 GOLGA8CPA6NN73 597 aa10.77□□□□□ -0.69
VPS8-212ENST00000452666 WNT2BQ93097 391 aa10.75□□□□□ -0.69
VPS8-212ENST00000452666 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
VPS8-212ENST00000452666 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
VPS8-212ENST00000452666 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
VPS8-212ENST00000452666 BCL2L12Q9HB09 334 aa10.73□□□□□ -0.69
VPS8-212ENST00000452666 ECM2O94769 699 aaPredicted RBP10.72□□□□□ -0.69
VPS8-212ENST00000452666 DSG2Q14126 1118 aa10.72□□□□□ -0.69
VPS8-212ENST00000452666 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
VPS8-212ENST00000452666 Q6ZNB5 142 aa10.7□□□□□ -0.7
VPS8-212ENST00000452666 PTPREP23469 700 aa10.69□□□□□ -0.7
VPS8-212ENST00000452666 ZBED2Q9BTP6 218 aa10.67□□□□□ -0.7
VPS8-212ENST00000452666 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
VPS8-212ENST00000452666 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
VPS8-212ENST00000452666 FOSBP53539 338 aa10.63□□□□□ -0.71
VPS8-212ENST00000452666 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS8-212ENST00000452666 RGL2O15211 777 aa10.62□□□□□ -0.71
VPS8-212ENST00000452666 ITGBL1O95965 494 aaPredicted RBP10.62□□□□□ -0.71
VPS8-212ENST00000452666 ANKK1Q8NFD2 765 aa10.57□□□□□ -0.72
VPS8-212ENST00000452666 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
VPS8-212ENST00000452666 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
VPS8-212ENST00000452666 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
VPS8-212ENST00000452666 NYAP1Q6ZVC0 841 aa10.53□□□□□ -0.72
VPS8-212ENST00000452666 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
VPS8-212ENST00000452666 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
VPS8-212ENST00000452666 PKD2Q13563 968 aa10.51□□□□□ -0.73
VPS8-212ENST00000452666 RABGEF1Q9UJ41 708 aa10.51□□□□□ -0.73
VPS8-212ENST00000452666 KCNC4Q03721 635 aa10.5□□□□□ -0.73
VPS8-212ENST00000452666 PPP1R15BQ5SWA1 713 aa10.5□□□□□ -0.73
VPS8-212ENST00000452666 PPP1R3GB7ZBB8 358 aa10.49□□□□□ -0.73
VPS8-212ENST00000452666 BCAMP50895 628 aa10.49□□□□□ -0.73
VPS8-212ENST00000452666 EVI5O60447 810 aa10.48□□□□□ -0.73
VPS8-212ENST00000452666 SOWAHBA6NEL2 793 aa10.47□□□□□ -0.73
VPS8-212ENST00000452666 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
VPS8-212ENST00000452666 TRAF7Q6Q0C0 670 aa10.46□□□□□ -0.73
VPS8-212ENST00000452666 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.73
VPS8-212ENST00000452666 GFRA3O60609 400 aa10.44□□□□□ -0.74
VPS8-212ENST00000452666 PROX2Q3B8N5 592 aa10.44□□□□□ -0.74
VPS8-212ENST00000452666 HS6ST3Q8IZP7 471 aa10.44□□□□□ -0.74
VPS8-212ENST00000452666 LCE2BO14633 110 aa10.42□□□□□ -0.74
VPS8-212ENST00000452666 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
VPS8-212ENST00000452666 ZFRQ96KR1 1074 aaKnown RBP10.41□□□□□ -0.74
VPS8-212ENST00000452666 COL9A1P20849 921 aa10.39□□□□□ -0.75
VPS8-212ENST00000452666 PDE4AP27815 886 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms