RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 MFRPQ9BY79 579 aa7.97□□□□□ -1.13
LRCH3-209ENST00000452660 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
LRCH3-209ENST00000452660 SPNS2Q8IVW8 549 aa7.95□□□□□ -1.14
LRCH3-209ENST00000452660 RGL2O15211 777 aa7.94□□□□□ -1.14
LRCH3-209ENST00000452660 POTEB3A0JP26 581 aa7.92□□□□□ -1.14
LRCH3-209ENST00000452660 MMRN1Q13201 1228 aa7.92□□□□□ -1.14
LRCH3-209ENST00000452660 POTEBQ6S5H4 581 aa7.92□□□□□ -1.14
LRCH3-209ENST00000452660 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
LRCH3-209ENST00000452660 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
LRCH3-209ENST00000452660 KIF3CO14782 793 aa7.91□□□□□ -1.14
LRCH3-209ENST00000452660 GPR153Q6NV75 609 aa7.91□□□□□ -1.14
LRCH3-209ENST00000452660 ERBB3P21860 1342 aa7.9□□□□□ -1.14
LRCH3-209ENST00000452660 SLC34A2O95436 690 aa7.89□□□□□ -1.15
LRCH3-209ENST00000452660 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
LRCH3-209ENST00000452660 HS6ST3Q8IZP7 471 aa7.88□□□□□ -1.15
LRCH3-209ENST00000452660 ZNF687Q8N1G0 1237 aa7.86□□□□□ -1.15
LRCH3-209ENST00000452660 C2orf72A6NCS6 295 aa7.84□□□□□ -1.15
LRCH3-209ENST00000452660 VARS2Q5ST30 1063 aaKnown RBP7.84□□□□□ -1.15
LRCH3-209ENST00000452660 RYDENQ9NUL5 291 aaKnown RBP7.84□□□□□ -1.15
LRCH3-209ENST00000452660 PTGER2P43116 358 aa7.83□□□□□ -1.16
LRCH3-209ENST00000452660 TMC2Q8TDI7 906 aa7.82□□□□□ -1.16
LRCH3-209ENST00000452660 ZNF316A6NFI3 1004 aaPredicted RBP7.81□□□□□ -1.16
LRCH3-209ENST00000452660 ARSIQ5FYB1 569 aa7.8□□□□□ -1.16
LRCH3-209ENST00000452660 PBX2P40425 430 aa7.79□□□□□ -1.16
LRCH3-209ENST00000452660 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
LRCH3-209ENST00000452660 FOXK1P85037 733 aa7.77□□□□□ -1.17
LRCH3-209ENST00000452660 PPP1R37O75864 691 aa7.76□□□□□ -1.17
LRCH3-209ENST00000452660 PTCD2Q8WV60 388 aaKnown RBP7.76□□□□□ -1.17
LRCH3-209ENST00000452660 GPHNQ9NQX3 736 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-209ENST00000452660 PCDHGA4Q9Y5G9 962 aa7.76□□□□□ -1.17
LRCH3-209ENST00000452660 CHGAP10645 457 aaKnown RBP7.73□□□□□ -1.17
LRCH3-209ENST00000452660 KDM4FA0A1W2PPD8 638 aa7.72□□□□□ -1.17
LRCH3-209ENST00000452660 NUDT7P0C024 238 aa7.71□□□□□ -1.18
LRCH3-209ENST00000452660 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.189e-9■■■□□ 17.7
LRCH3-209ENST00000452660 RNF166Q96A37 237 aaPredicted RBP7.71□□□□□ -1.18
LRCH3-209ENST00000452660 MYT1LQ9UL68 1186 aa7.71□□□□□ -1.18
LRCH3-209ENST00000452660 TBC1D12O60347 775 aa7.7□□□□□ -1.18
LRCH3-209ENST00000452660 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
LRCH3-209ENST00000452660 LHX6Q9UPM6 363 aa7.69□□□□□ -1.18
LRCH3-209ENST00000452660 NKX1-1Q15270 411 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-209ENST00000452660 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
LRCH3-209ENST00000452660 CRISPLD2Q9H0B8 497 aa7.67□□□□□ -1.18
LRCH3-209ENST00000452660 DSG2Q14126 1118 aa7.66□□□□□ -1.18
LRCH3-209ENST00000452660 ARHGAP33O14559 1287 aa7.65□□□□□ -1.18
LRCH3-209ENST00000452660 TK2O00142 265 aa7.64□□□□□ -1.19
LRCH3-209ENST00000452660 ANKRD13DQ6ZTN6 518 aa7.64□□□□□ -1.19
LRCH3-209ENST00000452660 PDE4AP27815 886 aa7.63□□□□□ -1.19
LRCH3-209ENST00000452660 OXER1Q8TDS5 423 aa7.63□□□□□ -1.19
LRCH3-209ENST00000452660 PPP4R3BQ5MIZ7 849 aa7.62□□□□□ -1.19
LRCH3-209ENST00000452660 POTEEQ6S8J3 1075 aa7.62□□□□□ -1.19
LRCH3-209ENST00000452660 GTPBP6O43824 516 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-209ENST00000452660 PPP1R15BQ5SWA1 713 aa7.59□□□□□ -1.19
LRCH3-209ENST00000452660 MFSD10Q14728 455 aa7.58□□□□□ -1.2
LRCH3-209ENST00000452660 ADGRD1Q6QNK2 874 aa7.58□□□□□ -1.2
LRCH3-209ENST00000452660 KCNH8Q96L42 1107 aa7.58□□□□□ -1.2
LRCH3-209ENST00000452660 ANO8Q9HCE9 1232 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-209ENST00000452660 NCKAP5LQ9HCH0 1330 aa7.57□□□□□ -1.2
LRCH3-209ENST00000452660 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
LRCH3-209ENST00000452660 HRO43593 1189 aa7.56□□□□□ -1.2
LRCH3-209ENST00000452660 BCL2L12Q9HB09 334 aa7.55□□□□□ -1.2
LRCH3-209ENST00000452660 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
LRCH3-209ENST00000452660 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
LRCH3-209ENST00000452660 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
LRCH3-209ENST00000452660 FOSBP53539 338 aa7.53□□□□□ -1.2
LRCH3-209ENST00000452660 JPH4Q96JJ6 628 aa7.52□□□□□ -1.21
LRCH3-209ENST00000452660 DMRTA1Q5VZB9 504 aa7.5□□□□□ -1.21
LRCH3-209ENST00000452660 LARP6Q9BRS8 491 aaKnown RBP7.5□□□□□ -1.21
LRCH3-209ENST00000452660 PSEN2P49810 448 aa7.49□□□□□ -1.21
LRCH3-209ENST00000452660 ZNF454Q8N9F8 522 aa7.49□□□□□ -1.21
LRCH3-209ENST00000452660 UPF1Q92900 1129 aaKnown RBP eCLIP7.49□□□□□ -1.21
LRCH3-209ENST00000452660 EVI5O60447 810 aa7.48□□□□□ -1.21
LRCH3-209ENST00000452660 PTPREP23469 700 aa7.48□□□□□ -1.21
LRCH3-209ENST00000452660 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
LRCH3-209ENST00000452660 VPS9D1Q9Y2B5 631 aa7.48□□□□□ -1.21
LRCH3-209ENST00000452660 MAP3K9P80192 1104 aa7.47□□□□□ -1.21
LRCH3-209ENST00000452660 STAC3Q96MF2 364 aa7.47□□□□□ -1.21
LRCH3-209ENST00000452660 CAMK2BQ13554 666 aa7.46□□□□□ -1.22
LRCH3-209ENST00000452660 BBXQ8WY36 941 aaPredicted RBP7.46□□□□□ -1.22
LRCH3-209ENST00000452660 ZDHHC16Q969W1 377 aa7.46□□□□□ -1.22
LRCH3-209ENST00000452660 DCAF8L2P0C7V8 631 aa7.45□□□□□ -1.22
LRCH3-209ENST00000452660 FBXW7Q969H0 707 aa7.45□□□□□ -1.22
LRCH3-209ENST00000452660 BHMG1C9JSJ3 638 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-209ENST00000452660 ZBED2Q9BTP6 218 aa7.44□□□□□ -1.22
LRCH3-209ENST00000452660 EMILIN3Q9NT22 766 aa7.43□□□□□ -1.22
LRCH3-209ENST00000452660 PHF14O94880 888 aa7.42□□□□□ -1.22
LRCH3-209ENST00000452660 IFFO2Q5TF58 517 aa7.42□□□□□ -1.22
LRCH3-209ENST00000452660 PLA2G2EQ9NZK7 142 aa7.42□□□□□ -1.22
LRCH3-209ENST00000452660 PPP1R3GB7ZBB8 358 aa7.41□□□□□ -1.22
LRCH3-209ENST00000452660 ONECUT3O60422 494 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-209ENST00000452660 NBPF3Q9H094 633 aa7.41□□□□□ -1.22
LRCH3-209ENST00000452660 AMER1Q5JTC6 1135 aaPredicted RBP7.4□□□□□ -1.22
LRCH3-209ENST00000452660 TYW1BQ6NUM6 668 aa7.4□□□□□ -1.22
LRCH3-209ENST00000452660 EPAS1Q99814 870 aa7.4□□□□□ -1.22
LRCH3-209ENST00000452660 ADAM33Q9BZ11 813 aa7.4□□□□□ -1.22
LRCH3-209ENST00000452660 CADPS2Q86UW7 1296 aa7.39□□□□□ -1.23
LRCH3-209ENST00000452660 PCDHGA10Q9Y5H3 936 aa7.39□□□□□ -1.23
LRCH3-209ENST00000452660 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
LRCH3-209ENST00000452660 RABGEF1Q9UJ41 708 aa7.38□□□□□ -1.23
LRCH3-209ENST00000452660 MRPL50Q8N5N7 158 aaKnown RBP7.37□□□□□ -1.23
LRCH3-209ENST00000452660 RGS20O76081 388 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms