RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZFYVE16Q7Z3T8 1539 aa34.84■■■■□ 3.17
C9orf3-208ENST00000451893 ZMYM4Q5VZL5 1548 aa34.82■■■■□ 3.16
C9orf3-208ENST00000451893 BCORL1Q5H9F3 1711 aa34.81■■■■□ 3.16
C9orf3-208ENST00000451893 POGZQ7Z3K3 1410 aa34.8■■■■□ 3.16
C9orf3-208ENST00000451893 MYT1LQ9UL68 1186 aa34.79■■■■□ 3.16
C9orf3-208ENST00000451893 ADAMTSL3P82987 1691 aa34.79■■■■□ 3.16
C9orf3-208ENST00000451893 HECW2Q9P2P5 1572 aa34.78■■■■□ 3.16
C9orf3-208ENST00000451893 MAGI2Q86UL8 1455 aa34.78■■■■□ 3.16
C9orf3-208ENST00000451893 MADDQ8WXG6 1647 aa34.72■■■■□ 3.15
C9orf3-208ENST00000451893 YEATS2Q9ULM3 1422 aa34.72■■■■□ 3.15
C9orf3-208ENST00000451893 PTPRMP28827 1452 aa34.71■■■■□ 3.15
C9orf3-208ENST00000451893 CDC42BPBQ9Y5S2 1711 aa34.7■■■■□ 3.15
C9orf3-208ENST00000451893 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
C9orf3-208ENST00000451893 PREX2Q70Z35 1606 aa34.69■■■■□ 3.14
C9orf3-208ENST00000451893 RIMS1Q86UR5 1692 aaKnown RBP34.66■■■■□ 3.14
C9orf3-208ENST00000451893 MLECQ14165 292 aa34.64■■■■□ 3.14
C9orf3-208ENST00000451893 PLPPR3Q6T4P5 718 aa34.62■■■■□ 3.13
C9orf3-208ENST00000451893 CEP162Q5TB80 1403 aa34.61■■■■□ 3.13
C9orf3-208ENST00000451893 CDC42BPAQ5VT25 1732 aa34.61■■■■□ 3.13
C9orf3-208ENST00000451893 ATP10AO60312 1499 aa34.59■■■■□ 3.13
C9orf3-208ENST00000451893 C9orf84Q5VXU9 1444 aa34.59■■■■□ 3.13
C9orf3-208ENST00000451893 AFAP1Q8N556 730 aa34.59■■■■□ 3.13
C9orf3-208ENST00000451893 MTUS2Q5JR59 1369 aa34.59■■■■□ 3.13
C9orf3-208ENST00000451893 ZNF777Q9ULD5 760 aaPredicted RBP34.58■■■■□ 3.13
C9orf3-208ENST00000451893 FER1L4A9Z1Z3 1794 aa34.54■■■■□ 3.12
C9orf3-208ENST00000451893 ITSN2Q9NZM3 1697 aa34.54■■■■□ 3.12
C9orf3-208ENST00000451893 KDM5CP41229 1560 aa34.54■■■■□ 3.12
C9orf3-208ENST00000451893 SIGLEC1Q9BZZ2 1709 aa34.54■■■■□ 3.12
C9orf3-208ENST00000451893 ABCC1P33527 1531 aa34.54■■■■□ 3.12
C9orf3-208ENST00000451893 CCNB3Q8WWL7 1395 aa34.49■■■■□ 3.11
C9orf3-208ENST00000451893 TRAPPC8Q9Y2L5 1435 aa34.45■■■■□ 3.11
C9orf3-208ENST00000451893 CFDP1Q9UEE9 299 aaPredicted RBP34.44■■■■□ 3.1
C9orf3-208ENST00000451893 GPATCH8Q9UKJ3 1502 aaKnown RBP34.43■■■■□ 3.1
C9orf3-208ENST00000451893 DIP2CQ9Y2E4 1556 aa34.43■■■■□ 3.1
C9orf3-208ENST00000451893 EHBP1L1Q8N3D4 1523 aa34.42■■■■□ 3.1
C9orf3-208ENST00000451893 ARHGEF12Q9NZN5 1544 aa34.42■■■■□ 3.1
C9orf3-208ENST00000451893 MLH3Q9UHC1 1453 aa34.42■■■■□ 3.1
C9orf3-208ENST00000451893 ABCA6Q8N139 1617 aa34.41■■■■□ 3.1
C9orf3-208ENST00000451893 SAMD9LQ8IVG5 1584 aa34.4■■■■□ 3.1
C9orf3-208ENST00000451893 SYCP2Q9BX26 1530 aa34.4■■■■□ 3.1
C9orf3-208ENST00000451893 LOC105371045A0A1W2PR82 267 aa34.37■■■■□ 3.09
C9orf3-208ENST00000451893 ESF1Q9H501 851 aaKnown RBP34.37■■■■□ 3.09
C9orf3-208ENST00000451893 PLEKHH2Q8IVE3 1493 aa34.37■■■■□ 3.09
C9orf3-208ENST00000451893 HNRNPMP52272 730 aaKnown RBP eCLIP34.34■■■■□ 3.09
C9orf3-208ENST00000451893 REREQ9P2R6 1566 aa34.33■■■■□ 3.09
C9orf3-208ENST00000451893 SPAG9O60271 1321 aaKnown RBP34.32■■■■□ 3.09
C9orf3-208ENST00000451893 KIDINS220Q9ULH0 1771 aa34.32■■■■□ 3.08
C9orf3-208ENST00000451893 LMTK3Q96Q04 1460 aa34.3■■■■□ 3.08
C9orf3-208ENST00000451893 TIAM1Q13009 1591 aa34.28■■■■□ 3.08
C9orf3-208ENST00000451893 SUPT6HQ7KZ85 1726 aaKnown RBP34.27■■■■□ 3.08
C9orf3-208ENST00000451893 KIAA1107Q9UPP5 1409 aa34.26■■■■□ 3.07
C9orf3-208ENST00000451893 AGLP35573 1532 aa34.23■■■■□ 3.07
C9orf3-208ENST00000451893 VPS8Q8N3P4 1428 aa34.22■■■■□ 3.07
C9orf3-208ENST00000451893 ATP7AQ04656 1500 aa34.22■■■■□ 3.07
C9orf3-208ENST00000451893 CEBPAP49715 358 aaPredicted RBP34.2■■■■□ 3.07
C9orf3-208ENST00000451893 HSPA2P54652 639 aa34.19■■■■□ 3.06
C9orf3-208ENST00000451893 PREX1Q8TCU6 1659 aa34.17■■■■□ 3.06
C9orf3-208ENST00000451893 NCOA2Q15596 1464 aa34.16■■■■□ 3.06
C9orf3-208ENST00000451893 INO80Q9ULG1 1556 aaPredicted RBP34.15■■■■□ 3.06
C9orf3-208ENST00000451893 ZNF644Q9H582 1327 aaPredicted RBP34.14■■■■□ 3.06
C9orf3-208ENST00000451893 ILDR1Q86SU0 546 aaPredicted RBP34.14■■■■□ 3.06
C9orf3-208ENST00000451893 CNTLNQ9NXG0 1405 aa34.1■■■■□ 3.05
C9orf3-208ENST00000451893 C3P01024 1663 aa34.09■■■■□ 3.05
C9orf3-208ENST00000451893 A2MP01023 1474 aa34.09■■■■□ 3.05
C9orf3-208ENST00000451893 UHRF1BP1Q6BDS2 1440 aa34.08■■■■□ 3.05
C9orf3-208ENST00000451893 SETD1BQ9UPS6 1966 aaKnown RBP34.08■■■■□ 3.05
C9orf3-208ENST00000451893 ADGBQ8N7X0 1667 aa34.08■■■■□ 3.05
C9orf3-208ENST00000451893 APLP2Q06481 763 aa34.05■■■■□ 3.04
C9orf3-208ENST00000451893 CAMSAP2Q08AD1 1489 aa34.05■■■■□ 3.04
C9orf3-208ENST00000451893 LRRC9Q6ZRR7 1453 aa34.05■■■■□ 3.04
C9orf3-208ENST00000451893 MBD5Q9P267 1494 aa34.01■■■■□ 3.04
C9orf3-208ENST00000451893 GGT6Q6P531 493 aa34.01■■■■□ 3.03
C9orf3-208ENST00000451893 CCDC141Q6ZP82 1450 aa34.01■■■■□ 3.03
C9orf3-208ENST00000451893 PLXNC1O60486 1568 aa33.99■■■■□ 3.03
C9orf3-208ENST00000451893 RSPH4AQ5TD94 716 aa33.99■■■■□ 3.03
C9orf3-208ENST00000451893 RTEL1-TNFRSF6BF6WH68 1400 aa33.97■■■■□ 3.03
C9orf3-208ENST00000451893 MROH2AA6NES4 1674 aa33.97■■■■□ 3.03
C9orf3-208ENST00000451893 CLTCQ00610 1675 aaKnown RBP33.96■■■■□ 3.03
C9orf3-208ENST00000451893 MAP3K1Q13233 1512 aa33.95■■■■□ 3.03
C9orf3-208ENST00000451893 TSPY4P0CV99 314 aa33.94■■■■□ 3.02
C9orf3-208ENST00000451893 TSPY10P0CW01 314 aa33.94■■■■□ 3.02
C9orf3-208ENST00000451893 ZMYM3Q14202 1370 aa33.9■■■■□ 3.02
C9orf3-208ENST00000451893 KANK4Q5T7N3 995 aaPredicted RBP33.9■■■■□ 3.02
C9orf3-208ENST00000451893 ARHGEF5Q12774 1597 aa33.87■■■■□ 3.01
C9orf3-208ENST00000451893 DHX29Q7Z478 1369 aaKnown RBP33.86■■■■□ 3.01
C9orf3-208ENST00000451893 DMRT2Q9Y5R5 561 aa33.86■■■■□ 3.01
C9orf3-208ENST00000451893 PPP6R1Q9UPN7 881 aa33.84■■■■□ 3.01
C9orf3-208ENST00000451893 KIF3BO15066 747 aa33.83■■■■□ 3.01
C9orf3-208ENST00000451893 NPATQ14207 1427 aa33.83■■■■□ 3.01
C9orf3-208ENST00000451893 FBXO41Q8TF61 875 aa33.83■■■■□ 3.01
C9orf3-208ENST00000451893 MYOM3Q5VTT5 1437 aa33.82■■■■□ 3
C9orf3-208ENST00000451893 MIA2Q96PC5 1412 aa33.79■■■■□ 3
C9orf3-208ENST00000451893 STRCQ7RTU9 1775 aa33.77■■■■□ 3
C9orf3-208ENST00000451893 MYO3AQ8NEV4 1616 aa33.71■■■□□ 2.99
C9orf3-208ENST00000451893 WASHC2CQ9Y4E1 1318 aa33.7■■■□□ 2.99
C9orf3-208ENST00000451893 KDM5DQ9BY66 1539 aa33.69■■■□□ 2.98
C9orf3-208ENST00000451893 MAST1Q9Y2H9 1570 aa33.69■■■□□ 2.98
C9orf3-208ENST00000451893 PTPRKQ15262 1439 aa33.69■■■□□ 2.98
C9orf3-208ENST00000451893 CAMSAP1Q5T5Y3 1602 aa33.67■■■□□ 2.98
C9orf3-208ENST00000451893 CERKQ8TCT0 537 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms