RNA–Protein interactions for RNA: ENST00000451743.6

MEG3-209, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,582 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-209ENST00000451743 RAPGEF3O95398 923 aa23.17■■□□□ 1.3
MEG3-209ENST00000451743 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
MEG3-209ENST00000451743 DENND4BO75064 1496 aaPredicted RBP23.16■■□□□ 1.3
MEG3-209ENST00000451743 CCNB3Q8WWL7 1395 aa23.16■■□□□ 1.3
MEG3-209ENST00000451743 ADGRL1O94910 1474 aa23.16■■□□□ 1.3
MEG3-209ENST00000451743 LRRC9Q6ZRR7 1453 aa23.16■■□□□ 1.3
MEG3-209ENST00000451743 GPATCH8Q9UKJ3 1502 aaKnown RBP23.15■■□□□ 1.3
MEG3-209ENST00000451743 SUPT6HQ7KZ85 1726 aaKnown RBP23.14■■□□□ 1.29
MEG3-209ENST00000451743 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
MEG3-209ENST00000451743 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
MEG3-209ENST00000451743 KANK4Q5T7N3 995 aaPredicted RBP23.1■■□□□ 1.29
MEG3-209ENST00000451743 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
MEG3-209ENST00000451743 NCOA2Q15596 1464 aa23.09■■□□□ 1.29
MEG3-209ENST00000451743 FRMPD1Q5SYB0 1578 aa23.08■■□□□ 1.29
MEG3-209ENST00000451743 ZNF777Q9ULD5 760 aaPredicted RBP23.07■■□□□ 1.28
MEG3-209ENST00000451743 ITSN2Q9NZM3 1697 aa23.07■■□□□ 1.28
MEG3-209ENST00000451743 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
MEG3-209ENST00000451743 ZNF518AQ6AHZ1 1483 aa23.03■■□□□ 1.28
MEG3-209ENST00000451743 ABCC1P33527 1531 aa23.03■■□□□ 1.28
MEG3-209ENST00000451743 ZMYM4Q5VZL5 1548 aa23.02■■□□□ 1.28
MEG3-209ENST00000451743 MAGI2Q86UL8 1455 aa23.02■■□□□ 1.27
MEG3-209ENST00000451743 SAMD9LQ8IVG5 1584 aa23.01■■□□□ 1.27
MEG3-209ENST00000451743 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
MEG3-209ENST00000451743 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
MEG3-209ENST00000451743 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
MEG3-209ENST00000451743 ARHGEF12Q9NZN5 1544 aa22.98■■□□□ 1.27
MEG3-209ENST00000451743 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
MEG3-209ENST00000451743 KDM5CP41229 1560 aa22.96■■□□□ 1.27
MEG3-209ENST00000451743 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.27
MEG3-209ENST00000451743 ZNF644Q9H582 1327 aaPredicted RBP22.95■■□□□ 1.26
MEG3-209ENST00000451743 ZFYVE16Q7Z3T8 1539 aa22.94■■□□□ 1.26
MEG3-209ENST00000451743 SYCP2Q9BX26 1530 aa22.94■■□□□ 1.26
MEG3-209ENST00000451743 MYT1LQ9UL68 1186 aa22.93■■□□□ 1.26
MEG3-209ENST00000451743 ARHGEF40Q8TER5 1519 aa22.93■■□□□ 1.26
MEG3-209ENST00000451743 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
MEG3-209ENST00000451743 MLH3Q9UHC1 1453 aa22.92■■□□□ 1.26
MEG3-209ENST00000451743 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
MEG3-209ENST00000451743 YEATS2Q9ULM3 1422 aa22.91■■□□□ 1.26
MEG3-209ENST00000451743 HECW2Q9P2P5 1572 aa22.9■■□□□ 1.26
MEG3-209ENST00000451743 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
MEG3-209ENST00000451743 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
MEG3-209ENST00000451743 ATP10AO60312 1499 aa22.88■■□□□ 1.25
MEG3-209ENST00000451743 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
MEG3-209ENST00000451743 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
MEG3-209ENST00000451743 KDM4FA0A1W2PPD8 638 aa22.87■■□□□ 1.25
MEG3-209ENST00000451743 ARID4BQ4LE39 1312 aaPredicted RBP22.86■■□□□ 1.25
MEG3-209ENST00000451743 KIDINS220Q9ULH0 1771 aa22.83■■□□□ 1.25
MEG3-209ENST00000451743 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
MEG3-209ENST00000451743 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
MEG3-209ENST00000451743 ARHGEF5Q12774 1597 aa22.8■■□□□ 1.24
MEG3-209ENST00000451743 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
MEG3-209ENST00000451743 CCDC141Q6ZP82 1450 aa22.8■■□□□ 1.24
MEG3-209ENST00000451743 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
MEG3-209ENST00000451743 ATP7AQ04656 1500 aa22.79■■□□□ 1.24
MEG3-209ENST00000451743 TSPY4P0CV99 314 aa22.79■■□□□ 1.24
MEG3-209ENST00000451743 TSPY10P0CW01 314 aa22.79■■□□□ 1.24
MEG3-209ENST00000451743 FGD6Q6ZV73 1430 aa22.79■■□□□ 1.24
MEG3-209ENST00000451743 RTEL1-TNFRSF6BF6WH68 1400 aa22.78■■□□□ 1.24
MEG3-209ENST00000451743 PTPN23Q9H3S7 1636 aa22.78■■□□□ 1.24
MEG3-209ENST00000451743 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
MEG3-209ENST00000451743 REREQ9P2R6 1566 aa22.77■■□□□ 1.24
MEG3-209ENST00000451743 BCORL1Q5H9F3 1711 aa22.76■■□□□ 1.23
MEG3-209ENST00000451743 PPARGC1BQ86YN6 1023 aaKnown RBP22.74■■□□□ 1.23
MEG3-209ENST00000451743 SIGLEC1Q9BZZ2 1709 aa22.74■■□□□ 1.23
MEG3-209ENST00000451743 TCOF1Q13428 1488 aaKnown RBP22.74■■□□□ 1.23
MEG3-209ENST00000451743 ADAMTSL3P82987 1691 aa22.72■■□□□ 1.23
MEG3-209ENST00000451743 AGLP35573 1532 aa22.7■■□□□ 1.22
MEG3-209ENST00000451743 ADGBQ8N7X0 1667 aa22.69■■□□□ 1.22
MEG3-209ENST00000451743 MLECQ14165 292 aa22.69■■□□□ 1.22
MEG3-209ENST00000451743 A2MP01023 1474 aa22.69■■□□□ 1.22
MEG3-209ENST00000451743 MAST1Q9Y2H9 1570 aa22.67■■□□□ 1.22
MEG3-209ENST00000451743 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
MEG3-209ENST00000451743 ABCC5O15440 1437 aa22.65■■□□□ 1.22
MEG3-209ENST00000451743 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.22
MEG3-209ENST00000451743 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.21
MEG3-209ENST00000451743 MADDQ8WXG6 1647 aa22.64■■□□□ 1.21
MEG3-209ENST00000451743 PLXNC1O60486 1568 aa22.64■■□□□ 1.21
MEG3-209ENST00000451743 DAPK1P53355 1430 aa22.63■■□□□ 1.21
MEG3-209ENST00000451743 SHANK2Q9UPX8 1470 aa22.62■■□□□ 1.21
MEG3-209ENST00000451743 CROCC2H7BZ55 1655 aa22.61■■□□□ 1.21
MEG3-209ENST00000451743 FER1L4A9Z1Z3 1794 aa22.6■■□□□ 1.21
MEG3-209ENST00000451743 PTPRMP28827 1452 aa22.6■■□□□ 1.21
MEG3-209ENST00000451743 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.2
MEG3-209ENST00000451743 ESF1Q9H501 851 aaKnown RBP22.58■■□□□ 1.2
MEG3-209ENST00000451743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.57■■□□□ 1.2
MEG3-209ENST00000451743 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
MEG3-209ENST00000451743 KIF3BO15066 747 aa22.55■■□□□ 1.2
MEG3-209ENST00000451743 GGT6Q6P531 493 aa22.55■■□□□ 1.2
MEG3-209ENST00000451743 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
MEG3-209ENST00000451743 ANKRD30AQ9BXX3 1397 aa22.54■■□□□ 1.2
MEG3-209ENST00000451743 RRP7BPQ9NSQ0 103 aa22.53■■□□□ 1.2
MEG3-209ENST00000451743 DUOX2Q9NRD8 1548 aa22.52■■□□□ 1.2
MEG3-209ENST00000451743 KIF15Q9NS87 1388 aa22.52■■□□□ 1.2
MEG3-209ENST00000451743 RRBP1Q9P2E9 1410 aaKnown RBP22.52■■□□□ 1.2
MEG3-209ENST00000451743 CNTLNQ9NXG0 1405 aa22.51■■□□□ 1.19
MEG3-209ENST00000451743 NCOA1Q15788 1441 aa22.5■■□□□ 1.19
MEG3-209ENST00000451743 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
MEG3-209ENST00000451743 EIF2AK4Q9P2K8 1649 aaKnown RBP22.48■■□□□ 1.19
MEG3-209ENST00000451743 ERBINQ96RT1 1412 aa22.46■■□□□ 1.19
MEG3-209ENST00000451743 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms