RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZFYVE16Q7Z3T8 1539 aa44.21■■■■■ 4.67
USP42-204ENST00000451154 MADDQ8WXG6 1647 aa44.21■■■■■ 4.67
USP42-204ENST00000451154 CLIP1P30622 1438 aa44.2■■■■■ 4.67
USP42-204ENST00000451154 POGZQ7Z3K3 1410 aa44.2■■■■■ 4.67
USP42-204ENST00000451154 MAGI2Q86UL8 1455 aa44.19■■■■■ 4.66
USP42-204ENST00000451154 CASKIN1Q8WXD9 1431 aa44.18■■■■■ 4.66
USP42-204ENST00000451154 PCF11O94913 1555 aaKnown RBP44.14■■■■■ 4.66
USP42-204ENST00000451154 ARHGAP5Q13017 1502 aa44.1■■■■■ 4.65
USP42-204ENST00000451154 SIGLEC1Q9BZZ2 1709 aa44.1■■■■■ 4.65
USP42-204ENST00000451154 MLECQ14165 292 aa44.08■■■■■ 4.65
USP42-204ENST00000451154 ILDR1Q86SU0 546 aaPredicted RBP44.08■■■■■ 4.65
USP42-204ENST00000451154 CCDC18Q5T9S5 1454 aa44.07■■■■■ 4.65
USP42-204ENST00000451154 RIMS1Q86UR5 1692 aaKnown RBP44.07■■■■■ 4.64
USP42-204ENST00000451154 AFAP1Q8N556 730 aa44.06■■■■■ 4.64
USP42-204ENST00000451154 PLPPR3Q6T4P5 718 aa44.03■■■■■ 4.64
USP42-204ENST00000451154 ATP10AO60312 1499 aa44.01■■■■■ 4.64
USP42-204ENST00000451154 CDC42BPBQ9Y5S2 1711 aa43.99■■■■■ 4.63
USP42-204ENST00000451154 ZNF518AQ6AHZ1 1483 aa43.96■■■■■ 4.63
USP42-204ENST00000451154 FYCO1Q9BQS8 1478 aa43.96■■■■■ 4.63
USP42-204ENST00000451154 MYT1LQ9UL68 1186 aa43.96■■■■■ 4.63
USP42-204ENST00000451154 C9orf84Q5VXU9 1444 aa43.92■■■■■ 4.62
USP42-204ENST00000451154 PREX2Q70Z35 1606 aa43.87■■■■■ 4.61
USP42-204ENST00000451154 KDM5CP41229 1560 aa43.86■■■■■ 4.61
USP42-204ENST00000451154 LMTK3Q96Q04 1460 aa43.85■■■■■ 4.61
USP42-204ENST00000451154 ARHGEF12Q9NZN5 1544 aa43.83■■■■■ 4.61
USP42-204ENST00000451154 FER1L4A9Z1Z3 1794 aa43.82■■■■■ 4.6
USP42-204ENST00000451154 TRAPPC8Q9Y2L5 1435 aa43.82■■■■■ 4.6
USP42-204ENST00000451154 CDC42BPAQ5VT25 1732 aa43.8■■■■■ 4.6
USP42-204ENST00000451154 ZNF777Q9ULD5 760 aaPredicted RBP43.78■■■■■ 4.6
USP42-204ENST00000451154 ABCC1P33527 1531 aa43.77■■■■■ 4.6
USP42-204ENST00000451154 HSPA2P54652 639 aa43.75■■■■■ 4.59
USP42-204ENST00000451154 MLH3Q9UHC1 1453 aa43.75■■■■■ 4.59
USP42-204ENST00000451154 DIP2CQ9Y2E4 1556 aa43.72■■■■■ 4.59
USP42-204ENST00000451154 ITSN2Q9NZM3 1697 aa43.71■■■■■ 4.59
USP42-204ENST00000451154 CEBPAP49715 358 aaPredicted RBP43.7■■■■■ 4.59
USP42-204ENST00000451154 GPATCH8Q9UKJ3 1502 aaKnown RBP43.69■■■■■ 4.59
USP42-204ENST00000451154 ABCA6Q8N139 1617 aa43.67■■■■■ 4.58
USP42-204ENST00000451154 HNRNPMP52272 730 aaKnown RBP eCLIP43.63■■■■■ 4.57
USP42-204ENST00000451154 MTUS2Q5JR59 1369 aa43.62■■■■■ 4.57
USP42-204ENST00000451154 CFDP1Q9UEE9 299 aaPredicted RBP43.61■■■■■ 4.57
USP42-204ENST00000451154 SAMD9LQ8IVG5 1584 aa43.6■■■■■ 4.57
USP42-204ENST00000451154 REREQ9P2R6 1566 aa43.6■■■■■ 4.57
USP42-204ENST00000451154 CEP162Q5TB80 1403 aa43.58■■■■■ 4.57
USP42-204ENST00000451154 CCNB3Q8WWL7 1395 aa43.58■■■■■ 4.57
USP42-204ENST00000451154 KIDINS220Q9ULH0 1771 aa43.58■■■■■ 4.57
USP42-204ENST00000451154 SYCP2Q9BX26 1530 aa43.53■■■■■ 4.56
USP42-204ENST00000451154 SPAG9O60271 1321 aaKnown RBP43.52■■■■■ 4.56
USP42-204ENST00000451154 AGLP35573 1532 aa43.51■■■■■ 4.56
USP42-204ENST00000451154 ESF1Q9H501 851 aaKnown RBP43.48■■■■■ 4.55
USP42-204ENST00000451154 KIAA1107Q9UPP5 1409 aa43.46■■■■■ 4.55
USP42-204ENST00000451154 FBXO41Q8TF61 875 aa43.44■■■■■ 4.54
USP42-204ENST00000451154 PLEKHH2Q8IVE3 1493 aa43.43■■■■■ 4.54
USP42-204ENST00000451154 SETD1BQ9UPS6 1966 aaKnown RBP43.42■■■■■ 4.54
USP42-204ENST00000451154 LOC105371045A0A1W2PR82 267 aa43.42■■■■■ 4.54
USP42-204ENST00000451154 PREX1Q8TCU6 1659 aa43.41■■■■■ 4.54
USP42-204ENST00000451154 ZNF644Q9H582 1327 aaPredicted RBP43.41■■■■■ 4.54
USP42-204ENST00000451154 EHBP1L1Q8N3D4 1523 aa43.36■■■■■ 4.53
USP42-204ENST00000451154 C3P01024 1663 aa43.34■■■■■ 4.53
USP42-204ENST00000451154 TIAM1Q13009 1591 aa43.34■■■■■ 4.53
USP42-204ENST00000451154 ATP7AQ04656 1500 aa43.32■■■■■ 4.53
USP42-204ENST00000451154 UHRF1BP1Q6BDS2 1440 aa43.31■■■■■ 4.52
USP42-204ENST00000451154 SUPT6HQ7KZ85 1726 aaKnown RBP43.3■■■■■ 4.52
USP42-204ENST00000451154 CNTLNQ9NXG0 1405 aa43.26■■■■■ 4.52
USP42-204ENST00000451154 INO80Q9ULG1 1556 aaPredicted RBP43.25■■■■■ 4.51
USP42-204ENST00000451154 A2MP01023 1474 aa43.24■■■■■ 4.51
USP42-204ENST00000451154 MBD5Q9P267 1494 aa43.22■■■■■ 4.51
USP42-204ENST00000451154 GGT6Q6P531 493 aa43.18■■■■■ 4.5
USP42-204ENST00000451154 NCOA2Q15596 1464 aa43.18■■■■■ 4.5
USP42-204ENST00000451154 ZMYM3Q14202 1370 aa43.17■■■■■ 4.5
USP42-204ENST00000451154 STRCQ7RTU9 1775 aa43.16■■■■■ 4.5
USP42-204ENST00000451154 PLXNC1O60486 1568 aa43.16■■■■■ 4.5
USP42-204ENST00000451154 DMRT2Q9Y5R5 561 aa43.14■■■■■ 4.5
USP42-204ENST00000451154 CERKQ8TCT0 537 aa43.13■■■■■ 4.49
USP42-204ENST00000451154 VPS8Q8N3P4 1428 aa43.1■■■■■ 4.49
USP42-204ENST00000451154 MROH2AA6NES4 1674 aa43.08■■■■■ 4.49
USP42-204ENST00000451154 ADGBQ8N7X0 1667 aa43.08■■■■■ 4.49
USP42-204ENST00000451154 RTEL1-TNFRSF6BF6WH68 1400 aa43.07■■■■■ 4.49
USP42-204ENST00000451154 CLTCQ00610 1675 aaKnown RBP43.06■■■■■ 4.48
USP42-204ENST00000451154 CAMSAP2Q08AD1 1489 aa43.03■■■■■ 4.48
USP42-204ENST00000451154 NPATQ14207 1427 aa43.03■■■■■ 4.48
USP42-204ENST00000451154 RSPH4AQ5TD94 716 aa43.01■■■■■ 4.48
USP42-204ENST00000451154 DHX29Q7Z478 1369 aaKnown RBP43.01■■■■■ 4.48
USP42-204ENST00000451154 PPP6R1Q9UPN7 881 aa43■■■■■ 4.47
USP42-204ENST00000451154 LRRC9Q6ZRR7 1453 aa43■■■■■ 4.47
USP42-204ENST00000451154 CCDC141Q6ZP82 1450 aa42.99■■■■■ 4.47
USP42-204ENST00000451154 KANK4Q5T7N3 995 aaPredicted RBP42.97■■■■■ 4.47
USP42-204ENST00000451154 KIF3BO15066 747 aa42.93■■■■■ 4.46
USP42-204ENST00000451154 PTPRTO14522 1441 aa42.92■■■■■ 4.46
USP42-204ENST00000451154 PTPRKQ15262 1439 aa42.91■■■■■ 4.46
USP42-204ENST00000451154 NCOA1Q15788 1441 aa42.89■■■■■ 4.46
USP42-204ENST00000451154 TSPY4P0CV99 314 aa42.89■■■■■ 4.46
USP42-204ENST00000451154 TSPY10P0CW01 314 aa42.89■■■■■ 4.46
USP42-204ENST00000451154 CAMSAP1Q5T5Y3 1602 aa42.85■■■■■ 4.45
USP42-204ENST00000451154 ARHGEF5Q12774 1597 aa42.82■■■■■ 4.45
USP42-204ENST00000451154 MAP3K1Q13233 1512 aa42.82■■■■■ 4.45
USP42-204ENST00000451154 NCKAP5LQ9HCH0 1330 aa42.81■■■■■ 4.44
USP42-204ENST00000451154 MYO3AQ8NEV4 1616 aa42.77■■■■■ 4.44
USP42-204ENST00000451154 WASHC2CQ9Y4E1 1318 aa42.74■■■■■ 4.43
USP42-204ENST00000451154 FBXO31Q5XUX0 539 aaPredicted RBP42.74■■■■■ 4.43
USP42-204ENST00000451154 CEP170BQ9Y4F5 1589 aaPredicted RBP42.71■■■■■ 4.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms