RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
LINC01238-204ENST00000451070 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
LINC01238-204ENST00000451070 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
LINC01238-204ENST00000451070 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
LINC01238-204ENST00000451070 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.19
LINC01238-204ENST00000451070 ILDR1Q86SU0 546 aaPredicted RBP16.26■□□□□ 0.19
LINC01238-204ENST00000451070 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
LINC01238-204ENST00000451070 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
LINC01238-204ENST00000451070 EFCAB2Q5VUJ9 269 aa16.24■□□□□ 0.19
LINC01238-204ENST00000451070 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
LINC01238-204ENST00000451070 CLIP1P30622 1438 aa16.22■□□□□ 0.19
LINC01238-204ENST00000451070 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
LINC01238-204ENST00000451070 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
LINC01238-204ENST00000451070 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
LINC01238-204ENST00000451070 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
LINC01238-204ENST00000451070 KDM5CP41229 1560 aa16.19■□□□□ 0.18
LINC01238-204ENST00000451070 ATP10AO60312 1499 aa16.19■□□□□ 0.18
LINC01238-204ENST00000451070 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
LINC01238-204ENST00000451070 ZNF518AQ6AHZ1 1483 aa16.18■□□□□ 0.18
LINC01238-204ENST00000451070 PREX2Q70Z35 1606 aa16.18■□□□□ 0.18
LINC01238-204ENST00000451070 C9orf84Q5VXU9 1444 aa16.17■□□□□ 0.18
LINC01238-204ENST00000451070 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
LINC01238-204ENST00000451070 MLECQ14165 292 aa16.16■□□□□ 0.18
LINC01238-204ENST00000451070 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
LINC01238-204ENST00000451070 ARHGEF12Q9NZN5 1544 aa16.15■□□□□ 0.18
LINC01238-204ENST00000451070 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
LINC01238-204ENST00000451070 ABCC1P33527 1531 aa16.14■□□□□ 0.17
LINC01238-204ENST00000451070 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
LINC01238-204ENST00000451070 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
LINC01238-204ENST00000451070 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
LINC01238-204ENST00000451070 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
LINC01238-204ENST00000451070 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
LINC01238-204ENST00000451070 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
LINC01238-204ENST00000451070 REREQ9P2R6 1566 aa16.1■□□□□ 0.17
LINC01238-204ENST00000451070 HSPA2P54652 639 aa16.08■□□□□ 0.16
LINC01238-204ENST00000451070 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.16
LINC01238-204ENST00000451070 SAMD9LQ8IVG5 1584 aa16.06■□□□□ 0.16
LINC01238-204ENST00000451070 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
LINC01238-204ENST00000451070 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
LINC01238-204ENST00000451070 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
LINC01238-204ENST00000451070 PREX1Q8TCU6 1659 aa16.04■□□□□ 0.16
LINC01238-204ENST00000451070 AGLP35573 1532 aa16.04■□□□□ 0.16
LINC01238-204ENST00000451070 SYCP2Q9BX26 1530 aa16.03■□□□□ 0.16
LINC01238-204ENST00000451070 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
LINC01238-204ENST00000451070 ZNF777Q9ULD5 760 aaPredicted RBP16.01■□□□□ 0.15
LINC01238-204ENST00000451070 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
LINC01238-204ENST00000451070 C3P01024 1663 aa16■□□□□ 0.15
LINC01238-204ENST00000451070 HNRNPMP52272 730 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC01238-204ENST00000451070 KIAA1107Q9UPP5 1409 aa15.98■□□□□ 0.15
LINC01238-204ENST00000451070 MTUS2Q5JR59 1369 aa15.98■□□□□ 0.15
LINC01238-204ENST00000451070 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
LINC01238-204ENST00000451070 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
LINC01238-204ENST00000451070 TIAM1Q13009 1591 aa15.96■□□□□ 0.15
LINC01238-204ENST00000451070 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.15
LINC01238-204ENST00000451070 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.14
LINC01238-204ENST00000451070 INO80Q9ULG1 1556 aaPredicted RBP15.96■□□□□ 0.14
LINC01238-204ENST00000451070 ATP7AQ04656 1500 aa15.95■□□□□ 0.14
LINC01238-204ENST00000451070 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
LINC01238-204ENST00000451070 STRCQ7RTU9 1775 aa15.95■□□□□ 0.14
LINC01238-204ENST00000451070 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
LINC01238-204ENST00000451070 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
LINC01238-204ENST00000451070 SUPT6HQ7KZ85 1726 aaKnown RBP15.94■□□□□ 0.14
LINC01238-204ENST00000451070 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
LINC01238-204ENST00000451070 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
LINC01238-204ENST00000451070 ZNF644Q9H582 1327 aaPredicted RBP15.92■□□□□ 0.14
LINC01238-204ENST00000451070 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
LINC01238-204ENST00000451070 MROH2AA6NES4 1674 aa15.91■□□□□ 0.14
LINC01238-204ENST00000451070 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
LINC01238-204ENST00000451070 A2MP01023 1474 aa15.9■□□□□ 0.14
LINC01238-204ENST00000451070 ADGBQ8N7X0 1667 aa15.88■□□□□ 0.13
LINC01238-204ENST00000451070 CLTCQ00610 1675 aaKnown RBP15.86■□□□□ 0.13
LINC01238-204ENST00000451070 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
LINC01238-204ENST00000451070 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
LINC01238-204ENST00000451070 ZMYM3Q14202 1370 aa15.86■□□□□ 0.13
LINC01238-204ENST00000451070 NPATQ14207 1427 aa15.85■□□□□ 0.13
LINC01238-204ENST00000451070 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
LINC01238-204ENST00000451070 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
LINC01238-204ENST00000451070 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
LINC01238-204ENST00000451070 PTPRTO14522 1441 aa15.82■□□□□ 0.12
LINC01238-204ENST00000451070 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
LINC01238-204ENST00000451070 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
LINC01238-204ENST00000451070 GGT6Q6P531 493 aa15.81■□□□□ 0.12
LINC01238-204ENST00000451070 VPS8Q8N3P4 1428 aa15.81■□□□□ 0.12
LINC01238-204ENST00000451070 CCDC141Q6ZP82 1450 aa15.8■□□□□ 0.12
LINC01238-204ENST00000451070 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
LINC01238-204ENST00000451070 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
LINC01238-204ENST00000451070 ZNF142P52746 1687 aaPredicted RBP15.79■□□□□ 0.12
LINC01238-204ENST00000451070 CAMSAP1Q5T5Y3 1602 aa15.79■□□□□ 0.12
LINC01238-204ENST00000451070 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
LINC01238-204ENST00000451070 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
LINC01238-204ENST00000451070 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
LINC01238-204ENST00000451070 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.11
LINC01238-204ENST00000451070 LTBP4Q8N2S1 1624 aa15.76■□□□□ 0.11
LINC01238-204ENST00000451070 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
LINC01238-204ENST00000451070 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
LINC01238-204ENST00000451070 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
LINC01238-204ENST00000451070 KIF3BO15066 747 aa15.73■□□□□ 0.11
LINC01238-204ENST00000451070 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
LINC01238-204ENST00000451070 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
LINC01238-204ENST00000451070 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms