RNA–Protein interactions for RNA: ENST00000450898.1

SATB1-207, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 464 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-207ENST00000450898 ZFYVE16Q7Z3T8 1539 aa44.58■■■■■ 4.73
SATB1-207ENST00000450898 EFCAB2Q5VUJ9 269 aa44.57■■■■■ 4.73
SATB1-207ENST00000450898 POGZQ7Z3K3 1410 aa44.56■■■■■ 4.72
SATB1-207ENST00000450898 MAGI2Q86UL8 1455 aa44.55■■■■■ 4.72
SATB1-207ENST00000450898 CLIP1P30622 1438 aa44.52■■■■■ 4.72
SATB1-207ENST00000450898 CASKIN1Q8WXD9 1431 aa44.5■■■■■ 4.71
SATB1-207ENST00000450898 PCF11O94913 1555 aaKnown RBP44.49■■■■■ 4.71
SATB1-207ENST00000450898 SIGLEC1Q9BZZ2 1709 aa44.49■■■■■ 4.71
SATB1-207ENST00000450898 RIMS1Q86UR5 1692 aaKnown RBP44.44■■■■■ 4.7
SATB1-207ENST00000450898 ARHGAP5Q13017 1502 aa44.43■■■■■ 4.7
SATB1-207ENST00000450898 CCDC18Q5T9S5 1454 aa44.41■■■■■ 4.7
SATB1-207ENST00000450898 ILDR1Q86SU0 546 aaPredicted RBP44.41■■■■■ 4.7
SATB1-207ENST00000450898 CDC42BPBQ9Y5S2 1711 aa44.34■■■■■ 4.69
SATB1-207ENST00000450898 ATP10AO60312 1499 aa44.34■■■■■ 4.69
SATB1-207ENST00000450898 MLECQ14165 292 aa44.32■■■■■ 4.69
SATB1-207ENST00000450898 ZNF518AQ6AHZ1 1483 aa44.32■■■■■ 4.69
SATB1-207ENST00000450898 AFAP1Q8N556 730 aa44.31■■■■■ 4.68
SATB1-207ENST00000450898 FYCO1Q9BQS8 1478 aa44.31■■■■■ 4.68
SATB1-207ENST00000450898 C9orf84Q5VXU9 1444 aa44.27■■■■■ 4.68
SATB1-207ENST00000450898 KDM5CP41229 1560 aa44.26■■■■■ 4.68
SATB1-207ENST00000450898 PREX2Q70Z35 1606 aa44.25■■■■■ 4.67
SATB1-207ENST00000450898 LMTK3Q96Q04 1460 aa44.25■■■■■ 4.67
SATB1-207ENST00000450898 PLPPR3Q6T4P5 718 aa44.23■■■■■ 4.67
SATB1-207ENST00000450898 FER1L4A9Z1Z3 1794 aa44.2■■■■■ 4.67
SATB1-207ENST00000450898 ARHGEF12Q9NZN5 1544 aa44.16■■■■■ 4.66
SATB1-207ENST00000450898 CDC42BPAQ5VT25 1732 aa44.16■■■■■ 4.66
SATB1-207ENST00000450898 MYT1LQ9UL68 1186 aa44.15■■■■■ 4.66
SATB1-207ENST00000450898 ABCC1P33527 1531 aa44.14■■■■■ 4.66
SATB1-207ENST00000450898 TRAPPC8Q9Y2L5 1435 aa44.13■■■■■ 4.65
SATB1-207ENST00000450898 DIP2CQ9Y2E4 1556 aa44.1■■■■■ 4.65
SATB1-207ENST00000450898 MLH3Q9UHC1 1453 aa44.1■■■■■ 4.65
SATB1-207ENST00000450898 ITSN2Q9NZM3 1697 aa44.09■■■■■ 4.65
SATB1-207ENST00000450898 ABCA6Q8N139 1617 aa44.05■■■■■ 4.64
SATB1-207ENST00000450898 HSPA2P54652 639 aa44.03■■■■■ 4.64
SATB1-207ENST00000450898 REREQ9P2R6 1566 aa44.01■■■■■ 4.64
SATB1-207ENST00000450898 GPATCH8Q9UKJ3 1502 aaKnown RBP44■■■■■ 4.63
SATB1-207ENST00000450898 ZNF777Q9ULD5 760 aaPredicted RBP43.99■■■■■ 4.63
SATB1-207ENST00000450898 SAMD9LQ8IVG5 1584 aa43.96■■■■■ 4.63
SATB1-207ENST00000450898 CEBPAP49715 358 aaPredicted RBP43.95■■■■■ 4.63
SATB1-207ENST00000450898 KIDINS220Q9ULH0 1771 aa43.95■■■■■ 4.63
SATB1-207ENST00000450898 AGLP35573 1532 aa43.89■■■■■ 4.62
SATB1-207ENST00000450898 MTUS2Q5JR59 1369 aa43.89■■■■■ 4.62
SATB1-207ENST00000450898 SYCP2Q9BX26 1530 aa43.88■■■■■ 4.61
SATB1-207ENST00000450898 HNRNPMP52272 730 aaKnown RBP eCLIP43.86■■■■■ 4.61
SATB1-207ENST00000450898 CEP162Q5TB80 1403 aa43.85■■■■■ 4.61
SATB1-207ENST00000450898 CCNB3Q8WWL7 1395 aa43.85■■■■■ 4.61
SATB1-207ENST00000450898 CFDP1Q9UEE9 299 aaPredicted RBP43.85■■■■■ 4.61
SATB1-207ENST00000450898 PREX1Q8TCU6 1659 aa43.81■■■■■ 4.6
SATB1-207ENST00000450898 KIAA1107Q9UPP5 1409 aa43.79■■■■■ 4.6
SATB1-207ENST00000450898 SPAG9O60271 1321 aaKnown RBP43.78■■■■■ 4.6
SATB1-207ENST00000450898 FBXO41Q8TF61 875 aa43.78■■■■■ 4.6
SATB1-207ENST00000450898 PLEKHH2Q8IVE3 1493 aa43.76■■■■■ 4.6
SATB1-207ENST00000450898 SETD1BQ9UPS6 1966 aaKnown RBP43.73■■■■■ 4.59
SATB1-207ENST00000450898 ESF1Q9H501 851 aaKnown RBP43.72■■■■■ 4.59
SATB1-207ENST00000450898 EHBP1L1Q8N3D4 1523 aa43.72■■■■■ 4.59
SATB1-207ENST00000450898 C3P01024 1663 aa43.72■■■■■ 4.59
SATB1-207ENST00000450898 TIAM1Q13009 1591 aa43.69■■■■■ 4.58
SATB1-207ENST00000450898 ATP7AQ04656 1500 aa43.68■■■■■ 4.58
SATB1-207ENST00000450898 INO80Q9ULG1 1556 aaPredicted RBP43.65■■■■■ 4.58
SATB1-207ENST00000450898 ZNF644Q9H582 1327 aaPredicted RBP43.65■■■■■ 4.58
SATB1-207ENST00000450898 UHRF1BP1Q6BDS2 1440 aa43.65■■■■■ 4.58
SATB1-207ENST00000450898 SUPT6HQ7KZ85 1726 aaKnown RBP43.62■■■■■ 4.57
SATB1-207ENST00000450898 CNTLNQ9NXG0 1405 aa43.61■■■■■ 4.57
SATB1-207ENST00000450898 A2MP01023 1474 aa43.56■■■■■ 4.56
SATB1-207ENST00000450898 PLXNC1O60486 1568 aa43.55■■■■■ 4.56
SATB1-207ENST00000450898 LOC105371045A0A1W2PR82 267 aa43.55■■■■■ 4.56
SATB1-207ENST00000450898 MBD5Q9P267 1494 aa43.55■■■■■ 4.56
SATB1-207ENST00000450898 STRCQ7RTU9 1775 aa43.54■■■■■ 4.56
SATB1-207ENST00000450898 MROH2AA6NES4 1674 aa43.49■■■■■ 4.55
SATB1-207ENST00000450898 NCOA2Q15596 1464 aa43.48■■■■■ 4.55
SATB1-207ENST00000450898 ZMYM3Q14202 1370 aa43.46■■■■■ 4.55
SATB1-207ENST00000450898 ADGBQ8N7X0 1667 aa43.44■■■■■ 4.54
SATB1-207ENST00000450898 CERKQ8TCT0 537 aa43.44■■■■■ 4.54
SATB1-207ENST00000450898 DMRT2Q9Y5R5 561 aa43.43■■■■■ 4.54
SATB1-207ENST00000450898 GGT6Q6P531 493 aa43.41■■■■■ 4.54
SATB1-207ENST00000450898 CLTCQ00610 1675 aaKnown RBP43.4■■■■■ 4.54
SATB1-207ENST00000450898 RTEL1-TNFRSF6BF6WH68 1400 aa43.39■■■■■ 4.54
SATB1-207ENST00000450898 NPATQ14207 1427 aa43.39■■■■■ 4.54
SATB1-207ENST00000450898 VPS8Q8N3P4 1428 aa43.39■■■■■ 4.54
SATB1-207ENST00000450898 CAMSAP2Q08AD1 1489 aa43.35■■■■■ 4.53
SATB1-207ENST00000450898 CCDC141Q6ZP82 1450 aa43.32■■■■■ 4.52
SATB1-207ENST00000450898 DHX29Q7Z478 1369 aaKnown RBP43.29■■■■■ 4.52
SATB1-207ENST00000450898 PPP6R1Q9UPN7 881 aa43.29■■■■■ 4.52
SATB1-207ENST00000450898 LRRC9Q6ZRR7 1453 aa43.29■■■■■ 4.52
SATB1-207ENST00000450898 RSPH4AQ5TD94 716 aa43.27■■■■■ 4.52
SATB1-207ENST00000450898 PTPRTO14522 1441 aa43.27■■■■■ 4.52
SATB1-207ENST00000450898 NCOA1Q15788 1441 aa43.25■■■■■ 4.51
SATB1-207ENST00000450898 PTPRKQ15262 1439 aa43.24■■■■■ 4.51
SATB1-207ENST00000450898 CAMSAP1Q5T5Y3 1602 aa43.19■■■■■ 4.51
SATB1-207ENST00000450898 KANK4Q5T7N3 995 aaPredicted RBP43.19■■■■■ 4.5
SATB1-207ENST00000450898 ARHGEF5Q12774 1597 aa43.18■■■■■ 4.5
SATB1-207ENST00000450898 MYO3AQ8NEV4 1616 aa43.16■■■■■ 4.5
SATB1-207ENST00000450898 KIF3BO15066 747 aa43.16■■■■■ 4.5
SATB1-207ENST00000450898 MAP3K1Q13233 1512 aa43.16■■■■■ 4.5
SATB1-207ENST00000450898 TSPY4P0CV99 314 aa43.12■■■■■ 4.49
SATB1-207ENST00000450898 TSPY10P0CW01 314 aa43.12■■■■■ 4.49
SATB1-207ENST00000450898 ZNF142P52746 1687 aaPredicted RBP43.11■■■■■ 4.49
SATB1-207ENST00000450898 CEP170BQ9Y4F5 1589 aaPredicted RBP43.08■■■■■ 4.49
SATB1-207ENST00000450898 NCKAP5LQ9HCH0 1330 aa43.06■■■■■ 4.48
SATB1-207ENST00000450898 LTBP4Q8N2S1 1624 aa43.02■■■■■ 4.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms