RNA–Protein interactions for RNA: ENST00000450844.1

GPATCH3-203, Transcript of G-patch domain containing 3, humanhuman

TSL 2

Gene GPATCH3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-203ENST00000450844 POGZQ7Z3K3 1410 aa28.53■■■□□ 2.16
GPATCH3-203ENST00000450844 MAGI2Q86UL8 1455 aa28.5■■■□□ 2.15
GPATCH3-203ENST00000450844 SCAPERQ9BY12 1400 aa28.5■■■□□ 2.15
GPATCH3-203ENST00000450844 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
GPATCH3-203ENST00000450844 LMTK3Q96Q04 1460 aa28.47■■■□□ 2.15
GPATCH3-203ENST00000450844 ATP1B4Q9UN42 357 aaPredicted RBP28.46■■■□□ 2.15
GPATCH3-203ENST00000450844 TROQ12816 1431 aaPredicted RBP28.45■■■□□ 2.15
GPATCH3-203ENST00000450844 FER1L4A9Z1Z3 1794 aa28.41■■■□□ 2.14
GPATCH3-203ENST00000450844 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
GPATCH3-203ENST00000450844 KDM5CP41229 1560 aa28.37■■■□□ 2.13
GPATCH3-203ENST00000450844 ARHGAP5Q13017 1502 aa28.37■■■□□ 2.13
GPATCH3-203ENST00000450844 EFCAB2Q5VUJ9 269 aa28.36■■■□□ 2.13
GPATCH3-203ENST00000450844 CDK11AQ9UQ88 783 aaPredicted RBP28.36■■■□□ 2.13
GPATCH3-203ENST00000450844 ATP10AO60312 1499 aa28.35■■■□□ 2.13
GPATCH3-203ENST00000450844 CLIP1P30622 1438 aa28.35■■■□□ 2.13
GPATCH3-203ENST00000450844 ARHGEF12Q9NZN5 1544 aa28.34■■■□□ 2.13
GPATCH3-203ENST00000450844 CASKIN1Q8WXD9 1431 aa28.34■■■□□ 2.13
GPATCH3-203ENST00000450844 PREX2Q70Z35 1606 aa28.33■■■□□ 2.13
GPATCH3-203ENST00000450844 C9orf84Q5VXU9 1444 aa28.33■■■□□ 2.13
GPATCH3-203ENST00000450844 ZNF518AQ6AHZ1 1483 aa28.33■■■□□ 2.13
GPATCH3-203ENST00000450844 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
GPATCH3-203ENST00000450844 DIP2CQ9Y2E4 1556 aa28.28■■■□□ 2.12
GPATCH3-203ENST00000450844 MLECQ14165 292 aa28.28■■■□□ 2.12
GPATCH3-203ENST00000450844 ABCC1P33527 1531 aa28.27■■■□□ 2.12
GPATCH3-203ENST00000450844 ABCA6Q8N139 1617 aa28.26■■■□□ 2.11
GPATCH3-203ENST00000450844 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.11
GPATCH3-203ENST00000450844 ITSN2Q9NZM3 1697 aa28.26■■■□□ 2.11
GPATCH3-203ENST00000450844 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
GPATCH3-203ENST00000450844 PLPPR3Q6T4P5 718 aa28.24■■■□□ 2.11
GPATCH3-203ENST00000450844 FYCO1Q9BQS8 1478 aa28.23■■■□□ 2.11
GPATCH3-203ENST00000450844 HSPA2P54652 639 aa28.23■■■□□ 2.11
GPATCH3-203ENST00000450844 REREQ9P2R6 1566 aa28.23■■■□□ 2.11
GPATCH3-203ENST00000450844 TRAPPC8Q9Y2L5 1435 aa28.2■■■□□ 2.11
GPATCH3-203ENST00000450844 MLH3Q9UHC1 1453 aa28.19■■■□□ 2.1
GPATCH3-203ENST00000450844 PREX1Q8TCU6 1659 aa28.18■■■□□ 2.1
GPATCH3-203ENST00000450844 KIDINS220Q9ULH0 1771 aa28.15■■■□□ 2.1
GPATCH3-203ENST00000450844 FBXO41Q8TF61 875 aa28.15■■■□□ 2.1
GPATCH3-203ENST00000450844 SAMD9LQ8IVG5 1584 aa28.13■■■□□ 2.09
GPATCH3-203ENST00000450844 AGLP35573 1532 aa28.1■■■□□ 2.09
GPATCH3-203ENST00000450844 CEBPAP49715 358 aaPredicted RBP28.1■■■□□ 2.09
GPATCH3-203ENST00000450844 C3P01024 1663 aa28.08■■■□□ 2.09
GPATCH3-203ENST00000450844 GPATCH8Q9UKJ3 1502 aaKnown RBP28.07■■■□□ 2.08
GPATCH3-203ENST00000450844 SYCP2Q9BX26 1530 aa28.06■■■□□ 2.08
GPATCH3-203ENST00000450844 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
GPATCH3-203ENST00000450844 STRCQ7RTU9 1775 aa28.03■■■□□ 2.08
GPATCH3-203ENST00000450844 INO80Q9ULG1 1556 aaPredicted RBP27.98■■■□□ 2.07
GPATCH3-203ENST00000450844 SETD1BQ9UPS6 1966 aaKnown RBP27.97■■■□□ 2.07
GPATCH3-203ENST00000450844 UHRF1BP1Q6BDS2 1440 aa27.95■■■□□ 2.07
GPATCH3-203ENST00000450844 ZNF777Q9ULD5 760 aaPredicted RBP27.95■■■□□ 2.06
GPATCH3-203ENST00000450844 ATP7AQ04656 1500 aa27.93■■■□□ 2.06
GPATCH3-203ENST00000450844 PLXNC1O60486 1568 aa27.93■■■□□ 2.06
GPATCH3-203ENST00000450844 TIAM1Q13009 1591 aa27.93■■■□□ 2.06
GPATCH3-203ENST00000450844 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
GPATCH3-203ENST00000450844 KIAA1107Q9UPP5 1409 aa27.92■■■□□ 2.06
GPATCH3-203ENST00000450844 HNRNPMP52272 730 aaKnown RBP eCLIP27.91■■■□□ 2.06
GPATCH3-203ENST00000450844 MROH2AA6NES4 1674 aa27.91■■■□□ 2.06
GPATCH3-203ENST00000450844 PLEKHH2Q8IVE3 1493 aa27.89■■■□□ 2.05
GPATCH3-203ENST00000450844 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
GPATCH3-203ENST00000450844 SPAG9O60271 1321 aaKnown RBP27.88■■■□□ 2.05
GPATCH3-203ENST00000450844 EHBP1L1Q8N3D4 1523 aa27.87■■■□□ 2.05
GPATCH3-203ENST00000450844 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
GPATCH3-203ENST00000450844 CNTLNQ9NXG0 1405 aa27.87■■■□□ 2.05
GPATCH3-203ENST00000450844 CERKQ8TCT0 537 aa27.86■■■□□ 2.05
GPATCH3-203ENST00000450844 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
GPATCH3-203ENST00000450844 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
GPATCH3-203ENST00000450844 CLTCQ00610 1675 aaKnown RBP27.83■■■□□ 2.05
GPATCH3-203ENST00000450844 A2MP01023 1474 aa27.82■■■□□ 2.04
GPATCH3-203ENST00000450844 ADGBQ8N7X0 1667 aa27.81■■■□□ 2.04
GPATCH3-203ENST00000450844 ESF1Q9H501 851 aaKnown RBP27.8■■■□□ 2.04
GPATCH3-203ENST00000450844 ZNF644Q9H582 1327 aaPredicted RBP27.8■■■□□ 2.04
GPATCH3-203ENST00000450844 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
GPATCH3-203ENST00000450844 NPATQ14207 1427 aa27.78■■■□□ 2.04
GPATCH3-203ENST00000450844 PTPRTO14522 1441 aa27.75■■■□□ 2.03
GPATCH3-203ENST00000450844 ZMYM3Q14202 1370 aa27.75■■■□□ 2.03
GPATCH3-203ENST00000450844 NCOA1Q15788 1441 aa27.75■■■□□ 2.03
GPATCH3-203ENST00000450844 DMRT2Q9Y5R5 561 aa27.73■■■□□ 2.03
GPATCH3-203ENST00000450844 MYO3AQ8NEV4 1616 aa27.73■■■□□ 2.03
GPATCH3-203ENST00000450844 ZNF142P52746 1687 aaPredicted RBP27.72■■■□□ 2.03
GPATCH3-203ENST00000450844 CAMSAP1Q5T5Y3 1602 aa27.7■■■□□ 2.03
GPATCH3-203ENST00000450844 NCOA2Q15596 1464 aa27.7■■■□□ 2.03
GPATCH3-203ENST00000450844 LTBP4Q8N2S1 1624 aa27.7■■■□□ 2.02
GPATCH3-203ENST00000450844 PTPRKQ15262 1439 aa27.68■■■□□ 2.02
GPATCH3-203ENST00000450844 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
GPATCH3-203ENST00000450844 CAMSAP2Q08AD1 1489 aa27.66■■■□□ 2.02
GPATCH3-203ENST00000450844 CEP170BQ9Y4F5 1589 aaPredicted RBP27.65■■■□□ 2.02
GPATCH3-203ENST00000450844 GGT6Q6P531 493 aa27.63■■■□□ 2.01
GPATCH3-203ENST00000450844 CCDC141Q6ZP82 1450 aa27.63■■■□□ 2.01
GPATCH3-203ENST00000450844 DHX29Q7Z478 1369 aaKnown RBP27.59■■■□□ 2.01
GPATCH3-203ENST00000450844 ARHGEF5Q12774 1597 aa27.57■■■□□ 2
GPATCH3-203ENST00000450844 PLA2R1Q13018 1463 aa27.57■■■□□ 2
GPATCH3-203ENST00000450844 VPS8Q8N3P4 1428 aa27.56■■■□□ 2
GPATCH3-203ENST00000450844 TCOF1Q13428 1488 aaKnown RBP27.56■■■□□ 2
GPATCH3-203ENST00000450844 PPP6R1Q9UPN7 881 aa27.55■■■□□ 2
GPATCH3-203ENST00000450844 LRRC9Q6ZRR7 1453 aa27.54■■■□□ 2
GPATCH3-203ENST00000450844 NCKAP5LQ9HCH0 1330 aa27.54■■■□□ 2
GPATCH3-203ENST00000450844 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
GPATCH3-203ENST00000450844 KDM5DQ9BY66 1539 aa27.51■■■□□ 2
GPATCH3-203ENST00000450844 IQSEC2Q5JU85 1478 aa27.51■■■□□ 2
GPATCH3-203ENST00000450844 FAM135AQ9P2D6 1515 aa27.5■■□□□ 1.99
GPATCH3-203ENST00000450844 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms