RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
CAPN13-202ENST00000450650 EHBP1L1Q8N3D4 1523 aa13.43□□□□□ -0.26
CAPN13-202ENST00000450650 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
CAPN13-202ENST00000450650 CHD1O14646 1710 aa13.42□□□□□ -0.26
CAPN13-202ENST00000450650 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
CAPN13-202ENST00000450650 BBXQ8WY36 941 aaPredicted RBP13.42□□□□□ -0.26
CAPN13-202ENST00000450650 SUPT6HQ7KZ85 1726 aaKnown RBP13.4□□□□□ -0.26
CAPN13-202ENST00000450650 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
CAPN13-202ENST00000450650 CARMIL2Q6F5E8 1435 aa13.4□□□□□ -0.27
CAPN13-202ENST00000450650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
CAPN13-202ENST00000450650 ITGAEP38570 1179 aa13.39□□□□□ -0.27
CAPN13-202ENST00000450650 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
CAPN13-202ENST00000450650 NCOA2Q15596 1464 aa13.39□□□□□ -0.27
CAPN13-202ENST00000450650 FAM50AQ14320 339 aaKnown RBP13.39□□□□□ -0.27
CAPN13-202ENST00000450650 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
CAPN13-202ENST00000450650 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
CAPN13-202ENST00000450650 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
CAPN13-202ENST00000450650 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
CAPN13-202ENST00000450650 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
CAPN13-202ENST00000450650 MYOM3Q5VTT5 1437 aa13.36□□□□□ -0.27
CAPN13-202ENST00000450650 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
CAPN13-202ENST00000450650 ARID3AQ99856 593 aa13.35□□□□□ -0.27
CAPN13-202ENST00000450650 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.28
CAPN13-202ENST00000450650 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
CAPN13-202ENST00000450650 ERICH6BQ5W0A0 696 aa13.33□□□□□ -0.28
CAPN13-202ENST00000450650 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
CAPN13-202ENST00000450650 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
CAPN13-202ENST00000450650 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
CAPN13-202ENST00000450650 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
CAPN13-202ENST00000450650 RAB3GAP2Q9H2M9 1393 aa13.3□□□□□ -0.28
CAPN13-202ENST00000450650 IGSF3O75054 1194 aa13.3□□□□□ -0.28
CAPN13-202ENST00000450650 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
CAPN13-202ENST00000450650 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
CAPN13-202ENST00000450650 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
CAPN13-202ENST00000450650 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
CAPN13-202ENST00000450650 ABCA8O94911 1581 aa13.27□□□□□ -0.29
CAPN13-202ENST00000450650 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
CAPN13-202ENST00000450650 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
CAPN13-202ENST00000450650 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
CAPN13-202ENST00000450650 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
CAPN13-202ENST00000450650 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
CAPN13-202ENST00000450650 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
CAPN13-202ENST00000450650 PTPRGP23470 1445 aa13.23□□□□□ -0.29
CAPN13-202ENST00000450650 PTPRKQ15262 1439 aa13.23□□□□□ -0.29
CAPN13-202ENST00000450650 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
CAPN13-202ENST00000450650 HFM1A2PYH4 1435 aa13.21□□□□□ -0.29
CAPN13-202ENST00000450650 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.3
CAPN13-202ENST00000450650 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.3
CAPN13-202ENST00000450650 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
CAPN13-202ENST00000450650 ATP10BO94823 1461 aa13.2□□□□□ -0.3
CAPN13-202ENST00000450650 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-202ENST00000450650 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-202ENST00000450650 FOXD1Q16676 465 aa13.19□□□□□ -0.3
CAPN13-202ENST00000450650 NEFLP07196 543 aa13.18□□□□□ -0.3
CAPN13-202ENST00000450650 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
CAPN13-202ENST00000450650 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
CAPN13-202ENST00000450650 CCDC9Q9Y3X0 531 aaKnown RBP13.17□□□□□ -0.3
CAPN13-202ENST00000450650 ERCC6L2Q5T890 1561 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 KIF14Q15058 1648 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 NAIPQ13075 1403 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
CAPN13-202ENST00000450650 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
CAPN13-202ENST00000450650 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
CAPN13-202ENST00000450650 AKNAQ7Z591 1439 aa13.15□□□□□ -0.3
CAPN13-202ENST00000450650 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
CAPN13-202ENST00000450650 DNAJC5Q9H3Z4 198 aa13.14□□□□□ -0.31
CAPN13-202ENST00000450650 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
CAPN13-202ENST00000450650 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
CAPN13-202ENST00000450650 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
CAPN13-202ENST00000450650 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
CAPN13-202ENST00000450650 DNMT1P26358 1616 aaKnown RBP13.13□□□□□ -0.31
CAPN13-202ENST00000450650 DAPK1P53355 1430 aa13.13□□□□□ -0.31
CAPN13-202ENST00000450650 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
CAPN13-202ENST00000450650 ABCC2Q92887 1545 aa13.12□□□□□ -0.31
CAPN13-202ENST00000450650 PDE4CQ08493 712 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
CAPN13-202ENST00000450650 ABCC5O15440 1437 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
CAPN13-202ENST00000450650 ROCK1Q13464 1354 aa13.1□□□□□ -0.31
CAPN13-202ENST00000450650 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
CAPN13-202ENST00000450650 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
CAPN13-202ENST00000450650 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
CAPN13-202ENST00000450650 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
CAPN13-202ENST00000450650 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
CAPN13-202ENST00000450650 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
CAPN13-202ENST00000450650 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
CAPN13-202ENST00000450650 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
CAPN13-202ENST00000450650 KDM6BO15054 1643 aa13.04□□□□□ -0.32
CAPN13-202ENST00000450650 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
CAPN13-202ENST00000450650 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
CAPN13-202ENST00000450650 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
CAPN13-202ENST00000450650 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
CAPN13-202ENST00000450650 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
CAPN13-202ENST00000450650 ADGRL2O95490 1459 aa13.02□□□□□ -0.33
CAPN13-202ENST00000450650 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.33
CAPN13-202ENST00000450650 ZCCHC11Q5TAX3 1644 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms