RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
CAPN13-202ENST00000450650 EHBP1L1Q8N3D4 1523 aa13.43□□□□□ -0.26
CAPN13-202ENST00000450650 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
CAPN13-202ENST00000450650 CHD1O14646 1710 aa13.42□□□□□ -0.26
CAPN13-202ENST00000450650 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
CAPN13-202ENST00000450650 BBXQ8WY36 941 aaPredicted RBP13.42□□□□□ -0.26
CAPN13-202ENST00000450650 SUPT6HQ7KZ85 1726 aaKnown RBP13.4□□□□□ -0.26
CAPN13-202ENST00000450650 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
CAPN13-202ENST00000450650 CARMIL2Q6F5E8 1435 aa13.4□□□□□ -0.27
CAPN13-202ENST00000450650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
CAPN13-202ENST00000450650 ITGAEP38570 1179 aa13.39□□□□□ -0.27
CAPN13-202ENST00000450650 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
CAPN13-202ENST00000450650 NCOA2Q15596 1464 aa13.39□□□□□ -0.27
CAPN13-202ENST00000450650 FAM50AQ14320 339 aaKnown RBP13.39□□□□□ -0.27
CAPN13-202ENST00000450650 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
CAPN13-202ENST00000450650 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
CAPN13-202ENST00000450650 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
CAPN13-202ENST00000450650 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
CAPN13-202ENST00000450650 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
CAPN13-202ENST00000450650 MYOM3Q5VTT5 1437 aa13.36□□□□□ -0.27
CAPN13-202ENST00000450650 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
CAPN13-202ENST00000450650 ARID3AQ99856 593 aa13.35□□□□□ -0.27
CAPN13-202ENST00000450650 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.28
CAPN13-202ENST00000450650 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
CAPN13-202ENST00000450650 ERICH6BQ5W0A0 696 aa13.33□□□□□ -0.28
CAPN13-202ENST00000450650 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
CAPN13-202ENST00000450650 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
CAPN13-202ENST00000450650 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
CAPN13-202ENST00000450650 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
CAPN13-202ENST00000450650 RAB3GAP2Q9H2M9 1393 aa13.3□□□□□ -0.28
CAPN13-202ENST00000450650 IGSF3O75054 1194 aa13.3□□□□□ -0.28
CAPN13-202ENST00000450650 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
CAPN13-202ENST00000450650 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
CAPN13-202ENST00000450650 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
CAPN13-202ENST00000450650 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
CAPN13-202ENST00000450650 ABCA8O94911 1581 aa13.27□□□□□ -0.29
CAPN13-202ENST00000450650 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
CAPN13-202ENST00000450650 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
CAPN13-202ENST00000450650 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
CAPN13-202ENST00000450650 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
CAPN13-202ENST00000450650 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
CAPN13-202ENST00000450650 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
CAPN13-202ENST00000450650 PTPRGP23470 1445 aa13.23□□□□□ -0.29
CAPN13-202ENST00000450650 PTPRKQ15262 1439 aa13.23□□□□□ -0.29
CAPN13-202ENST00000450650 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
CAPN13-202ENST00000450650 HFM1A2PYH4 1435 aa13.21□□□□□ -0.29
CAPN13-202ENST00000450650 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.3
CAPN13-202ENST00000450650 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.3
CAPN13-202ENST00000450650 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
CAPN13-202ENST00000450650 ATP10BO94823 1461 aa13.2□□□□□ -0.3
CAPN13-202ENST00000450650 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-202ENST00000450650 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-202ENST00000450650 FOXD1Q16676 465 aa13.19□□□□□ -0.3
CAPN13-202ENST00000450650 NEFLP07196 543 aa13.18□□□□□ -0.3
CAPN13-202ENST00000450650 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
CAPN13-202ENST00000450650 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
CAPN13-202ENST00000450650 CCDC9Q9Y3X0 531 aaKnown RBP13.17□□□□□ -0.3
CAPN13-202ENST00000450650 ERCC6L2Q5T890 1561 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 KIF14Q15058 1648 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 NAIPQ13075 1403 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
CAPN13-202ENST00000450650 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
CAPN13-202ENST00000450650 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
CAPN13-202ENST00000450650 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
CAPN13-202ENST00000450650 AKNAQ7Z591 1439 aa13.15□□□□□ -0.3
CAPN13-202ENST00000450650 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
CAPN13-202ENST00000450650 DNAJC5Q9H3Z4 198 aa13.14□□□□□ -0.31
CAPN13-202ENST00000450650 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
CAPN13-202ENST00000450650 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
CAPN13-202ENST00000450650 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
CAPN13-202ENST00000450650 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
CAPN13-202ENST00000450650 DNMT1P26358 1616 aaKnown RBP13.13□□□□□ -0.31
CAPN13-202ENST00000450650 DAPK1P53355 1430 aa13.13□□□□□ -0.31
CAPN13-202ENST00000450650 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
CAPN13-202ENST00000450650 ABCC2Q92887 1545 aa13.12□□□□□ -0.31
CAPN13-202ENST00000450650 PDE4CQ08493 712 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
CAPN13-202ENST00000450650 ABCC5O15440 1437 aa13.11□□□□□ -0.31
CAPN13-202ENST00000450650 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
CAPN13-202ENST00000450650 ROCK1Q13464 1354 aa13.1□□□□□ -0.31
CAPN13-202ENST00000450650 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
CAPN13-202ENST00000450650 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
CAPN13-202ENST00000450650 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
CAPN13-202ENST00000450650 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
CAPN13-202ENST00000450650 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
CAPN13-202ENST00000450650 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
CAPN13-202ENST00000450650 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
CAPN13-202ENST00000450650 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
CAPN13-202ENST00000450650 KDM6BO15054 1643 aa13.04□□□□□ -0.32
CAPN13-202ENST00000450650 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
CAPN13-202ENST00000450650 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
CAPN13-202ENST00000450650 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
CAPN13-202ENST00000450650 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
CAPN13-202ENST00000450650 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
CAPN13-202ENST00000450650 ADGRL2O95490 1459 aa13.02□□□□□ -0.33
CAPN13-202ENST00000450650 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.33
CAPN13-202ENST00000450650 ZCCHC11Q5TAX3 1644 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms