RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CDC42BPBQ9Y5S2 1711 aa19.09■□□□□ 0.65
LSP1P3-201ENST00000449530 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
LSP1P3-201ENST00000449530 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
LSP1P3-201ENST00000449530 EHBP1L1Q8N3D4 1523 aa19.06■□□□□ 0.64
LSP1P3-201ENST00000449530 RAPGEF3O95398 923 aa19.06■□□□□ 0.64
LSP1P3-201ENST00000449530 FBXO41Q8TF61 875 aa19.06■□□□□ 0.64
LSP1P3-201ENST00000449530 ARHGEF40Q8TER5 1519 aa19.05■□□□□ 0.64
LSP1P3-201ENST00000449530 ZMYM4Q5VZL5 1548 aa19.04■□□□□ 0.64
LSP1P3-201ENST00000449530 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
LSP1P3-201ENST00000449530 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
LSP1P3-201ENST00000449530 POGZQ7Z3K3 1410 aa19.02■□□□□ 0.64
LSP1P3-201ENST00000449530 SCAPERQ9BY12 1400 aa19.01■□□□□ 0.63
LSP1P3-201ENST00000449530 EFCAB2Q5VUJ9 269 aa19.01■□□□□ 0.63
LSP1P3-201ENST00000449530 ITSN2Q9NZM3 1697 aa19■□□□□ 0.63
LSP1P3-201ENST00000449530 ABCC1P33527 1531 aa19■□□□□ 0.63
LSP1P3-201ENST00000449530 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
LSP1P3-201ENST00000449530 SUPT6HQ7KZ85 1726 aaKnown RBP18.97■□□□□ 0.63
LSP1P3-201ENST00000449530 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
LSP1P3-201ENST00000449530 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
LSP1P3-201ENST00000449530 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
LSP1P3-201ENST00000449530 KDM5CP41229 1560 aa18.94■□□□□ 0.62
LSP1P3-201ENST00000449530 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
LSP1P3-201ENST00000449530 YEATS2Q9ULM3 1422 aa18.93■□□□□ 0.62
LSP1P3-201ENST00000449530 MAGI2Q86UL8 1455 aa18.92■□□□□ 0.62
LSP1P3-201ENST00000449530 SYCP2Q9BX26 1530 aa18.92■□□□□ 0.62
LSP1P3-201ENST00000449530 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
LSP1P3-201ENST00000449530 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
LSP1P3-201ENST00000449530 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
LSP1P3-201ENST00000449530 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
LSP1P3-201ENST00000449530 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
LSP1P3-201ENST00000449530 BCORL1Q5H9F3 1711 aa18.89■□□□□ 0.61
LSP1P3-201ENST00000449530 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
LSP1P3-201ENST00000449530 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
LSP1P3-201ENST00000449530 ABCA6Q8N139 1617 aa18.87■□□□□ 0.61
LSP1P3-201ENST00000449530 ADAMTSL3P82987 1691 aa18.86■□□□□ 0.61
LSP1P3-201ENST00000449530 DIP2CQ9Y2E4 1556 aa18.86■□□□□ 0.61
LSP1P3-201ENST00000449530 AFAP1Q8N556 730 aa18.85■□□□□ 0.61
LSP1P3-201ENST00000449530 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
LSP1P3-201ENST00000449530 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
LSP1P3-201ENST00000449530 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
LSP1P3-201ENST00000449530 MADDQ8WXG6 1647 aa18.84■□□□□ 0.61
LSP1P3-201ENST00000449530 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
LSP1P3-201ENST00000449530 KIDINS220Q9ULH0 1771 aa18.83■□□□□ 0.61
LSP1P3-201ENST00000449530 ATP10AO60312 1499 aa18.82■□□□□ 0.6
LSP1P3-201ENST00000449530 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
LSP1P3-201ENST00000449530 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
LSP1P3-201ENST00000449530 INO80Q9ULG1 1556 aaPredicted RBP18.81■□□□□ 0.6
LSP1P3-201ENST00000449530 RIMS1Q86UR5 1692 aaKnown RBP18.8■□□□□ 0.6
LSP1P3-201ENST00000449530 KIAA1107Q9UPP5 1409 aa18.8■□□□□ 0.6
LSP1P3-201ENST00000449530 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
LSP1P3-201ENST00000449530 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
LSP1P3-201ENST00000449530 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
LSP1P3-201ENST00000449530 ATP7AQ04656 1500 aa18.78■□□□□ 0.6
LSP1P3-201ENST00000449530 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
LSP1P3-201ENST00000449530 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
LSP1P3-201ENST00000449530 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.6
LSP1P3-201ENST00000449530 APLP2Q06481 763 aa18.77■□□□□ 0.6
LSP1P3-201ENST00000449530 MBD5Q9P267 1494 aa18.74■□□□□ 0.59
LSP1P3-201ENST00000449530 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
LSP1P3-201ENST00000449530 PTPRMP28827 1452 aa18.73■□□□□ 0.59
LSP1P3-201ENST00000449530 LMTK3Q96Q04 1460 aa18.73■□□□□ 0.59
LSP1P3-201ENST00000449530 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
LSP1P3-201ENST00000449530 CCDC141Q6ZP82 1450 aa18.72■□□□□ 0.59
LSP1P3-201ENST00000449530 ADGBQ8N7X0 1667 aa18.71■□□□□ 0.59
LSP1P3-201ENST00000449530 MLECQ14165 292 aa18.71■□□□□ 0.59
LSP1P3-201ENST00000449530 ARHGEF5Q12774 1597 aa18.71■□□□□ 0.59
LSP1P3-201ENST00000449530 AGLP35573 1532 aa18.69■□□□□ 0.58
LSP1P3-201ENST00000449530 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
LSP1P3-201ENST00000449530 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
LSP1P3-201ENST00000449530 PTPN23Q9H3S7 1636 aa18.66■□□□□ 0.58
LSP1P3-201ENST00000449530 A2MP01023 1474 aa18.65■□□□□ 0.58
LSP1P3-201ENST00000449530 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
LSP1P3-201ENST00000449530 RTEL1-TNFRSF6BF6WH68 1400 aa18.63■□□□□ 0.57
LSP1P3-201ENST00000449530 MAST1Q9Y2H9 1570 aa18.61■□□□□ 0.57
LSP1P3-201ENST00000449530 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
LSP1P3-201ENST00000449530 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
LSP1P3-201ENST00000449530 C3P01024 1663 aa18.58■□□□□ 0.57
LSP1P3-201ENST00000449530 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.56
LSP1P3-201ENST00000449530 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.56
LSP1P3-201ENST00000449530 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
LSP1P3-201ENST00000449530 SOCS7O14512 581 aa18.56■□□□□ 0.56
LSP1P3-201ENST00000449530 CERKQ8TCT0 537 aa18.56■□□□□ 0.56
LSP1P3-201ENST00000449530 CLTCQ00610 1675 aaKnown RBP18.56■□□□□ 0.56
LSP1P3-201ENST00000449530 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
LSP1P3-201ENST00000449530 SHANK2Q9UPX8 1470 aa18.54■□□□□ 0.56
LSP1P3-201ENST00000449530 TSPY4P0CV99 314 aa18.54■□□□□ 0.56
LSP1P3-201ENST00000449530 TSPY10P0CW01 314 aa18.54■□□□□ 0.56
LSP1P3-201ENST00000449530 DISP3Q9P2K9 1392 aa18.54■□□□□ 0.56
LSP1P3-201ENST00000449530 HSPA2P54652 639 aa18.53■□□□□ 0.56
LSP1P3-201ENST00000449530 ILDR2Q71H61 639 aa18.53■□□□□ 0.56
LSP1P3-201ENST00000449530 PREX1Q8TCU6 1659 aa18.53■□□□□ 0.56
LSP1P3-201ENST00000449530 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
LSP1P3-201ENST00000449530 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
LSP1P3-201ENST00000449530 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.56
LSP1P3-201ENST00000449530 ABCC5O15440 1437 aa18.51■□□□□ 0.55
LSP1P3-201ENST00000449530 DAPK1P53355 1430 aa18.51■□□□□ 0.55
LSP1P3-201ENST00000449530 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
LSP1P3-201ENST00000449530 CEBPAP49715 358 aaPredicted RBP18.49■□□□□ 0.55
LSP1P3-201ENST00000449530 RNF17Q9BXT8 1623 aaKnown RBP18.48■□□□□ 0.55
LSP1P3-201ENST00000449530 GGT6Q6P531 493 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms