RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
PBRM1-216ENST00000449505 PLCH2O75038 1416 aa11.32□□□□□ -0.6
PBRM1-216ENST00000449505 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
PBRM1-216ENST00000449505 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-216ENST00000449505 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-216ENST00000449505 ARHGAP5Q13017 1502 aa11.29□□□□□ -0.6
PBRM1-216ENST00000449505 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
PBRM1-216ENST00000449505 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
PBRM1-216ENST00000449505 MSH5O43196 834 aa11.28□□□□□ -0.6
PBRM1-216ENST00000449505 PCF11O94913 1555 aaKnown RBP11.28□□□□□ -0.6
PBRM1-216ENST00000449505 SCAPERQ9BY12 1400 aa11.27□□□□□ -0.6
PBRM1-216ENST00000449505 FYCO1Q9BQS8 1478 aa11.27□□□□□ -0.6
PBRM1-216ENST00000449505 EFCAB2Q5VUJ9 269 aa11.27□□□□□ -0.61
PBRM1-216ENST00000449505 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
PBRM1-216ENST00000449505 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
PBRM1-216ENST00000449505 C9orf84Q5VXU9 1444 aa11.26□□□□□ -0.61
PBRM1-216ENST00000449505 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
PBRM1-216ENST00000449505 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
PBRM1-216ENST00000449505 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
PBRM1-216ENST00000449505 KDM5CP41229 1560 aa11.24□□□□□ -0.61
PBRM1-216ENST00000449505 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
PBRM1-216ENST00000449505 ATP10AO60312 1499 aa11.23□□□□□ -0.61
PBRM1-216ENST00000449505 REREQ9P2R6 1566 aa11.22□□□□□ -0.61
PBRM1-216ENST00000449505 ABCC1P33527 1531 aa11.21□□□□□ -0.61
PBRM1-216ENST00000449505 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.61
PBRM1-216ENST00000449505 ARHGEF12Q9NZN5 1544 aa11.2□□□□□ -0.62
PBRM1-216ENST00000449505 CDC42BPBQ9Y5S2 1711 aa11.2□□□□□ -0.62
PBRM1-216ENST00000449505 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
PBRM1-216ENST00000449505 ILDR1Q86SU0 546 aaPredicted RBP11.19□□□□□ -0.62
PBRM1-216ENST00000449505 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
PBRM1-216ENST00000449505 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
PBRM1-216ENST00000449505 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
PBRM1-216ENST00000449505 MYT1LQ9UL68 1186 aa11.18□□□□□ -0.62
PBRM1-216ENST00000449505 CDC42BPAQ5VT25 1732 aa11.18□□□□□ -0.62
PBRM1-216ENST00000449505 PREX1Q8TCU6 1659 aa11.17□□□□□ -0.62
PBRM1-216ENST00000449505 ABCA6Q8N139 1617 aa11.17□□□□□ -0.62
PBRM1-216ENST00000449505 PLEKHH2Q8IVE3 1493 aa11.16□□□□□ -0.62
PBRM1-216ENST00000449505 AGLP35573 1532 aa11.15□□□□□ -0.62
PBRM1-216ENST00000449505 MLECQ14165 292 aa11.15□□□□□ -0.62
PBRM1-216ENST00000449505 EHBP1L1Q8N3D4 1523 aa11.14□□□□□ -0.63
PBRM1-216ENST00000449505 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
PBRM1-216ENST00000449505 SYCP2Q9BX26 1530 aa11.13□□□□□ -0.63
PBRM1-216ENST00000449505 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
PBRM1-216ENST00000449505 CNTLNQ9NXG0 1405 aa11.12□□□□□ -0.63
PBRM1-216ENST00000449505 AFAP1Q8N556 730 aa11.12□□□□□ -0.63
PBRM1-216ENST00000449505 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 TRAPPC8Q9Y2L5 1435 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 PLPPR3Q6T4P5 718 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
PBRM1-216ENST00000449505 KIAA1107Q9UPP5 1409 aa11.1□□□□□ -0.63
PBRM1-216ENST00000449505 GPATCH8Q9UKJ3 1502 aaKnown RBP11.1□□□□□ -0.63
PBRM1-216ENST00000449505 ATP7AQ04656 1500 aa11.09□□□□□ -0.63
PBRM1-216ENST00000449505 MROH2AA6NES4 1674 aa11.09□□□□□ -0.63
PBRM1-216ENST00000449505 INO80Q9ULG1 1556 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-216ENST00000449505 C3P01024 1663 aa11.08□□□□□ -0.64
PBRM1-216ENST00000449505 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
PBRM1-216ENST00000449505 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
PBRM1-216ENST00000449505 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
PBRM1-216ENST00000449505 SPAG9O60271 1321 aaKnown RBP11.08□□□□□ -0.64
PBRM1-216ENST00000449505 HSPA2P54652 639 aa11.07□□□□□ -0.64
PBRM1-216ENST00000449505 CFDP1Q9UEE9 299 aaPredicted RBP11.07□□□□□ -0.64
PBRM1-216ENST00000449505 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
PBRM1-216ENST00000449505 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
PBRM1-216ENST00000449505 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
PBRM1-216ENST00000449505 PLXNC1O60486 1568 aa11.06□□□□□ -0.64
PBRM1-216ENST00000449505 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
PBRM1-216ENST00000449505 NPATQ14207 1427 aa11.04□□□□□ -0.64
PBRM1-216ENST00000449505 A2MP01023 1474 aa11.04□□□□□ -0.64
PBRM1-216ENST00000449505 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-216ENST00000449505 FAM135AQ9P2D6 1515 aa11.02□□□□□ -0.65
PBRM1-216ENST00000449505 CCDC141Q6ZP82 1450 aa11.01□□□□□ -0.65
PBRM1-216ENST00000449505 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
PBRM1-216ENST00000449505 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
PBRM1-216ENST00000449505 ZNF142P52746 1687 aaPredicted RBP11□□□□□ -0.65
PBRM1-216ENST00000449505 CLTCQ00610 1675 aaKnown RBP11□□□□□ -0.65
PBRM1-216ENST00000449505 PTPRTO14522 1441 aa11□□□□□ -0.65
PBRM1-216ENST00000449505 NCOA2Q15596 1464 aa11□□□□□ -0.65
PBRM1-216ENST00000449505 STRCQ7RTU9 1775 aa10.99□□□□□ -0.65
PBRM1-216ENST00000449505 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
PBRM1-216ENST00000449505 VPS8Q8N3P4 1428 aa10.99□□□□□ -0.65
PBRM1-216ENST00000449505 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
PBRM1-216ENST00000449505 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
PBRM1-216ENST00000449505 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
PBRM1-216ENST00000449505 NCOA1Q15788 1441 aa10.98□□□□□ -0.65
PBRM1-216ENST00000449505 MBD5Q9P267 1494 aa10.98□□□□□ -0.65
PBRM1-216ENST00000449505 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
PBRM1-216ENST00000449505 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
PBRM1-216ENST00000449505 CEP170BQ9Y4F5 1589 aaPredicted RBP10.96□□□□□ -0.65
PBRM1-216ENST00000449505 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
PBRM1-216ENST00000449505 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
PBRM1-216ENST00000449505 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
PBRM1-216ENST00000449505 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
PBRM1-216ENST00000449505 KDM5DQ9BY66 1539 aa10.95□□□□□ -0.66
PBRM1-216ENST00000449505 IQSEC2Q5JU85 1478 aa10.95□□□□□ -0.66
PBRM1-216ENST00000449505 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
PBRM1-216ENST00000449505 DHX29Q7Z478 1369 aaKnown RBP10.94□□□□□ -0.66
PBRM1-216ENST00000449505 GGT6Q6P531 493 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms