RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 ZMYM4Q5VZL5 1548 aa36.57■■■■□ 3.44
NME4-206ENST00000448828 POGZQ7Z3K3 1410 aa36.56■■■■□ 3.44
NME4-206ENST00000448828 ZFYVE16Q7Z3T8 1539 aa36.54■■■■□ 3.44
NME4-206ENST00000448828 CEP162Q5TB80 1403 aa36.54■■■■□ 3.44
NME4-206ENST00000448828 YEATS2Q9ULM3 1422 aa36.49■■■■□ 3.43
NME4-206ENST00000448828 PREX2Q70Z35 1606 aa36.48■■■■□ 3.43
NME4-206ENST00000448828 CDC42BPBQ9Y5S2 1711 aa36.47■■■■□ 3.43
NME4-206ENST00000448828 BCORL1Q5H9F3 1711 aa36.46■■■■□ 3.43
NME4-206ENST00000448828 MAGI2Q86UL8 1455 aa36.46■■■■□ 3.43
NME4-206ENST00000448828 ADAMTSL3P82987 1691 aa36.45■■■■□ 3.42
NME4-206ENST00000448828 ZNF518AQ6AHZ1 1483 aa36.41■■■■□ 3.42
NME4-206ENST00000448828 MADDQ8WXG6 1647 aa36.39■■■■□ 3.42
NME4-206ENST00000448828 MYT1LQ9UL68 1186 aa36.39■■■■□ 3.42
NME4-206ENST00000448828 CDC42BPAQ5VT25 1732 aa36.39■■■■□ 3.42
NME4-206ENST00000448828 HECW2Q9P2P5 1572 aa36.36■■■■□ 3.41
NME4-206ENST00000448828 MTUS2Q5JR59 1369 aa36.36■■■■□ 3.41
NME4-206ENST00000448828 LOC105371045A0A1W2PR82 267 aa36.35■■■■□ 3.41
NME4-206ENST00000448828 PTPRMP28827 1452 aa36.35■■■■□ 3.41
NME4-206ENST00000448828 ABCC1P33527 1531 aa36.34■■■■□ 3.41
NME4-206ENST00000448828 AFAP1Q8N556 730 aa36.33■■■■□ 3.41
NME4-206ENST00000448828 SIGLEC1Q9BZZ2 1709 aa36.33■■■■□ 3.41
NME4-206ENST00000448828 KDM5CP41229 1560 aa36.32■■■■□ 3.4
NME4-206ENST00000448828 RIMS1Q86UR5 1692 aaKnown RBP36.3■■■■□ 3.4
NME4-206ENST00000448828 ITSN2Q9NZM3 1697 aa36.3■■■■□ 3.4
NME4-206ENST00000448828 ZNF777Q9ULD5 760 aaPredicted RBP36.3■■■■□ 3.4
NME4-206ENST00000448828 C9orf84Q5VXU9 1444 aa36.28■■■■□ 3.4
NME4-206ENST00000448828 MLECQ14165 292 aa36.28■■■■□ 3.4
NME4-206ENST00000448828 ATP10AO60312 1499 aa36.28■■■■□ 3.4
NME4-206ENST00000448828 CCNB3Q8WWL7 1395 aa36.25■■■■□ 3.39
NME4-206ENST00000448828 EHBP1L1Q8N3D4 1523 aa36.24■■■■□ 3.39
NME4-206ENST00000448828 ARHGEF12Q9NZN5 1544 aa36.24■■■■□ 3.39
NME4-206ENST00000448828 GPATCH8Q9UKJ3 1502 aaKnown RBP36.24■■■■□ 3.39
NME4-206ENST00000448828 TRAPPC8Q9Y2L5 1435 aa36.24■■■■□ 3.39
NME4-206ENST00000448828 SAMD9LQ8IVG5 1584 aa36.22■■■■□ 3.39
NME4-206ENST00000448828 PLPPR3Q6T4P5 718 aa36.2■■■■□ 3.39
NME4-206ENST00000448828 DIP2CQ9Y2E4 1556 aa36.19■■■■□ 3.38
NME4-206ENST00000448828 SYCP2Q9BX26 1530 aa36.18■■■■□ 3.38
NME4-206ENST00000448828 CFDP1Q9UEE9 299 aaPredicted RBP36.18■■■■□ 3.38
NME4-206ENST00000448828 FER1L4A9Z1Z3 1794 aa36.17■■■■□ 3.38
NME4-206ENST00000448828 ABCA6Q8N139 1617 aa36.16■■■■□ 3.38
NME4-206ENST00000448828 MLH3Q9UHC1 1453 aa36.15■■■■□ 3.38
NME4-206ENST00000448828 TIAM1Q13009 1591 aa36.12■■■■□ 3.37
NME4-206ENST00000448828 VPS8Q8N3P4 1428 aa36.12■■■■□ 3.37
NME4-206ENST00000448828 PLEKHH2Q8IVE3 1493 aa36.08■■■■□ 3.37
NME4-206ENST00000448828 HNRNPMP52272 730 aaKnown RBP eCLIP36.08■■■■□ 3.37
NME4-206ENST00000448828 KIDINS220Q9ULH0 1771 aa36.06■■■■□ 3.36
NME4-206ENST00000448828 REREQ9P2R6 1566 aa36.06■■■■□ 3.36
NME4-206ENST00000448828 SUPT6HQ7KZ85 1726 aaKnown RBP36.05■■■■□ 3.36
NME4-206ENST00000448828 SPAG9O60271 1321 aaKnown RBP36.02■■■■□ 3.36
NME4-206ENST00000448828 KIAA1107Q9UPP5 1409 aa36.01■■■■□ 3.36
NME4-206ENST00000448828 NCOA2Q15596 1464 aa35.99■■■■□ 3.35
NME4-206ENST00000448828 ATP7AQ04656 1500 aa35.96■■■■□ 3.35
NME4-206ENST00000448828 ZNF644Q9H582 1327 aaPredicted RBP35.95■■■■□ 3.35
NME4-206ENST00000448828 LMTK3Q96Q04 1460 aa35.94■■■■□ 3.34
NME4-206ENST00000448828 INO80Q9ULG1 1556 aaPredicted RBP35.93■■■■□ 3.34
NME4-206ENST00000448828 AGLP35573 1532 aa35.93■■■■□ 3.34
NME4-206ENST00000448828 ESF1Q9H501 851 aaKnown RBP35.9■■■■□ 3.34
NME4-206ENST00000448828 LRRC9Q6ZRR7 1453 aa35.9■■■■□ 3.34
NME4-206ENST00000448828 CEBPAP49715 358 aaPredicted RBP35.86■■■■□ 3.33
NME4-206ENST00000448828 CAMSAP2Q08AD1 1489 aa35.85■■■■□ 3.33
NME4-206ENST00000448828 MBD5Q9P267 1494 aa35.82■■■■□ 3.32
NME4-206ENST00000448828 A2MP01023 1474 aa35.8■■■■□ 3.32
NME4-206ENST00000448828 MAP3K1Q13233 1512 aa35.8■■■■□ 3.32
NME4-206ENST00000448828 HSPA2P54652 639 aa35.79■■■■□ 3.32
NME4-206ENST00000448828 APLP2Q06481 763 aa35.77■■■■□ 3.32
NME4-206ENST00000448828 KANK4Q5T7N3 995 aaPredicted RBP35.77■■■■□ 3.32
NME4-206ENST00000448828 CCDC141Q6ZP82 1450 aa35.77■■■■□ 3.32
NME4-206ENST00000448828 ADGBQ8N7X0 1667 aa35.77■■■■□ 3.32
NME4-206ENST00000448828 PREX1Q8TCU6 1659 aa35.77■■■■□ 3.32
NME4-206ENST00000448828 PLXNC1O60486 1568 aa35.76■■■■□ 3.32
NME4-206ENST00000448828 C3P01024 1663 aa35.75■■■■□ 3.31
NME4-206ENST00000448828 CNTLNQ9NXG0 1405 aa35.72■■■■□ 3.31
NME4-206ENST00000448828 RTEL1-TNFRSF6BF6WH68 1400 aa35.69■■■■□ 3.3
NME4-206ENST00000448828 UHRF1BP1Q6BDS2 1440 aa35.66■■■■□ 3.3
NME4-206ENST00000448828 GGT6Q6P531 493 aa35.66■■■■□ 3.3
NME4-206ENST00000448828 ARHGEF5Q12774 1597 aa35.64■■■■□ 3.3
NME4-206ENST00000448828 RSPH4AQ5TD94 716 aa35.64■■■■□ 3.3
NME4-206ENST00000448828 MYOM3Q5VTT5 1437 aa35.64■■■■□ 3.3
NME4-206ENST00000448828 MROH2AA6NES4 1674 aa35.62■■■■□ 3.29
NME4-206ENST00000448828 CLTCQ00610 1675 aaKnown RBP35.62■■■■□ 3.29
NME4-206ENST00000448828 TSPY4P0CV99 314 aa35.59■■■■□ 3.29
NME4-206ENST00000448828 TSPY10P0CW01 314 aa35.59■■■■□ 3.29
NME4-206ENST00000448828 DHX29Q7Z478 1369 aaKnown RBP35.57■■■■□ 3.28
NME4-206ENST00000448828 MIA2Q96PC5 1412 aa35.57■■■■□ 3.28
NME4-206ENST00000448828 ZMYM3Q14202 1370 aa35.55■■■■□ 3.28
NME4-206ENST00000448828 ILDR1Q86SU0 546 aaPredicted RBP35.55■■■■□ 3.28
NME4-206ENST00000448828 SETD1BQ9UPS6 1966 aaKnown RBP35.53■■■■□ 3.28
NME4-206ENST00000448828 KIF3BO15066 747 aa35.51■■■■□ 3.28
NME4-206ENST00000448828 NPATQ14207 1427 aa35.48■■■■□ 3.27
NME4-206ENST00000448828 MAST1Q9Y2H9 1570 aa35.46■■■■□ 3.27
NME4-206ENST00000448828 PTPN23Q9H3S7 1636 aa35.44■■■■□ 3.26
NME4-206ENST00000448828 PPP6R1Q9UPN7 881 aa35.44■■■■□ 3.26
NME4-206ENST00000448828 KDM5DQ9BY66 1539 aa35.39■■■■□ 3.26
NME4-206ENST00000448828 MYO3AQ8NEV4 1616 aa35.37■■■■□ 3.25
NME4-206ENST00000448828 STRCQ7RTU9 1775 aa35.37■■■■□ 3.25
NME4-206ENST00000448828 PTPRKQ15262 1439 aa35.37■■■■□ 3.25
NME4-206ENST00000448828 FGD6Q6ZV73 1430 aa35.37■■■■□ 3.25
NME4-206ENST00000448828 CROCC2H7BZ55 1655 aa35.36■■■■□ 3.25
NME4-206ENST00000448828 WASHC2CQ9Y4E1 1318 aa35.33■■■■□ 3.25
NME4-206ENST00000448828 FAM135AQ9P2D6 1515 aa35.32■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms