RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ZMYM4Q5VZL5 1548 aa31.75■■■□□ 2.67
VCP-203ENST00000448530 POGZQ7Z3K3 1410 aa31.72■■■□□ 2.67
VCP-203ENST00000448530 ZFYVE16Q7Z3T8 1539 aa31.71■■■□□ 2.67
VCP-203ENST00000448530 MAGI2Q86UL8 1455 aa31.71■■■□□ 2.67
VCP-203ENST00000448530 ADAMTSL3P82987 1691 aa31.67■■■□□ 2.66
VCP-203ENST00000448530 BCORL1Q5H9F3 1711 aa31.67■■■□□ 2.66
VCP-203ENST00000448530 CDC42BPBQ9Y5S2 1711 aa31.64■■■□□ 2.66
VCP-203ENST00000448530 YEATS2Q9ULM3 1422 aa31.64■■■□□ 2.66
VCP-203ENST00000448530 PREX2Q70Z35 1606 aa31.64■■■□□ 2.65
VCP-203ENST00000448530 CEP162Q5TB80 1403 aa31.63■■■□□ 2.65
VCP-203ENST00000448530 ZNF518AQ6AHZ1 1483 aa31.6■■■□□ 2.65
VCP-203ENST00000448530 HECW2Q9P2P5 1572 aa31.58■■■□□ 2.65
VCP-203ENST00000448530 PTPRMP28827 1452 aa31.58■■■□□ 2.65
VCP-203ENST00000448530 MADDQ8WXG6 1647 aa31.57■■■□□ 2.64
VCP-203ENST00000448530 CDC42BPAQ5VT25 1732 aa31.57■■■□□ 2.64
VCP-203ENST00000448530 MYT1LQ9UL68 1186 aa31.56■■■□□ 2.64
VCP-203ENST00000448530 AFAP1Q8N556 730 aa31.54■■■□□ 2.64
VCP-203ENST00000448530 MTUS2Q5JR59 1369 aa31.53■■■□□ 2.64
VCP-203ENST00000448530 ATP10AO60312 1499 aa31.52■■■□□ 2.64
VCP-203ENST00000448530 KDM5CP41229 1560 aa31.51■■■□□ 2.64
VCP-203ENST00000448530 ABCC1P33527 1531 aa31.5■■■□□ 2.63
VCP-203ENST00000448530 C9orf84Q5VXU9 1444 aa31.49■■■□□ 2.63
VCP-203ENST00000448530 RIMS1Q86UR5 1692 aaKnown RBP31.49■■■□□ 2.63
VCP-203ENST00000448530 SIGLEC1Q9BZZ2 1709 aa31.49■■■□□ 2.63
VCP-203ENST00000448530 MLECQ14165 292 aa31.47■■■□□ 2.63
VCP-203ENST00000448530 ZNF777Q9ULD5 760 aaPredicted RBP31.47■■■□□ 2.63
VCP-203ENST00000448530 ITSN2Q9NZM3 1697 aa31.47■■■□□ 2.63
VCP-203ENST00000448530 LOC105371045A0A1W2PR82 267 aa31.46■■■□□ 2.63
VCP-203ENST00000448530 GPATCH8Q9UKJ3 1502 aaKnown RBP31.44■■■□□ 2.62
VCP-203ENST00000448530 CCNB3Q8WWL7 1395 aa31.44■■■□□ 2.62
VCP-203ENST00000448530 ARHGEF12Q9NZN5 1544 aa31.43■■■□□ 2.62
VCP-203ENST00000448530 TRAPPC8Q9Y2L5 1435 aa31.42■■■□□ 2.62
VCP-203ENST00000448530 MLH3Q9UHC1 1453 aa31.41■■■□□ 2.62
VCP-203ENST00000448530 EHBP1L1Q8N3D4 1523 aa31.4■■■□□ 2.62
VCP-203ENST00000448530 CFDP1Q9UEE9 299 aaPredicted RBP31.4■■■□□ 2.62
VCP-203ENST00000448530 FER1L4A9Z1Z3 1794 aa31.4■■■□□ 2.62
VCP-203ENST00000448530 SAMD9LQ8IVG5 1584 aa31.39■■■□□ 2.61
VCP-203ENST00000448530 DIP2CQ9Y2E4 1556 aa31.39■■■□□ 2.61
VCP-203ENST00000448530 PLPPR3Q6T4P5 718 aa31.36■■■□□ 2.61
VCP-203ENST00000448530 ABCA6Q8N139 1617 aa31.35■■■□□ 2.61
VCP-203ENST00000448530 SYCP2Q9BX26 1530 aa31.34■■■□□ 2.61
VCP-203ENST00000448530 PLEKHH2Q8IVE3 1493 aa31.34■■■□□ 2.61
VCP-203ENST00000448530 REREQ9P2R6 1566 aa31.32■■■□□ 2.6
VCP-203ENST00000448530 HNRNPMP52272 730 aaKnown RBP eCLIP31.31■■■□□ 2.62e-6■■□□□ 13.4
VCP-203ENST00000448530 KIDINS220Q9ULH0 1771 aa31.3■■■□□ 2.6
VCP-203ENST00000448530 VPS8Q8N3P4 1428 aa31.29■■■□□ 2.6
VCP-203ENST00000448530 KIAA1107Q9UPP5 1409 aa31.29■■■□□ 2.6
VCP-203ENST00000448530 TIAM1Q13009 1591 aa31.29■■■□□ 2.6
VCP-203ENST00000448530 SPAG9O60271 1321 aaKnown RBP31.27■■■□□ 2.6
VCP-203ENST00000448530 SUPT6HQ7KZ85 1726 aaKnown RBP31.26■■■□□ 2.59
VCP-203ENST00000448530 AGLP35573 1532 aa31.23■■■□□ 2.59
VCP-203ENST00000448530 LMTK3Q96Q04 1460 aa31.21■■■□□ 2.59
VCP-203ENST00000448530 ESF1Q9H501 851 aaKnown RBP31.2■■■□□ 2.59
VCP-203ENST00000448530 NCOA2Q15596 1464 aa31.2■■■□□ 2.58
VCP-203ENST00000448530 ATP7AQ04656 1500 aa31.19■■■□□ 2.58
VCP-203ENST00000448530 ZNF644Q9H582 1327 aaPredicted RBP31.17■■■□□ 2.58
VCP-203ENST00000448530 INO80Q9ULG1 1556 aaPredicted RBP31.15■■■□□ 2.58
VCP-203ENST00000448530 CEBPAP49715 358 aaPredicted RBP31.12■■■□□ 2.57
VCP-203ENST00000448530 LRRC9Q6ZRR7 1453 aa31.12■■■□□ 2.57
VCP-203ENST00000448530 MBD5Q9P267 1494 aa31.08■■■□□ 2.57
VCP-203ENST00000448530 MAP3K1Q13233 1512 aa31.08■■■□□ 2.57
VCP-203ENST00000448530 A2MP01023 1474 aa31.08■■■□□ 2.57
VCP-203ENST00000448530 PREX1Q8TCU6 1659 aa31.07■■■□□ 2.56
VCP-203ENST00000448530 HSPA2P54652 639 aa31.07■■■□□ 2.56
VCP-203ENST00000448530 CAMSAP2Q08AD1 1489 aa31.06■■■□□ 2.56
VCP-203ENST00000448530 CNTLNQ9NXG0 1405 aa31.06■■■□□ 2.56
VCP-203ENST00000448530 ADGBQ8N7X0 1667 aa31.05■■■□□ 2.56
VCP-203ENST00000448530 C3P01024 1663 aa31.03■■■□□ 2.56
VCP-203ENST00000448530 APLP2Q06481 763 aa31.03■■■□□ 2.56
VCP-203ENST00000448530 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
VCP-203ENST00000448530 RSPH4AQ5TD94 716 aa31.02■■■□□ 2.56
VCP-203ENST00000448530 SETD1BQ9UPS6 1966 aaKnown RBP31.02■■■□□ 2.56
VCP-203ENST00000448530 CCDC141Q6ZP82 1450 aa31.01■■■□□ 2.56
VCP-203ENST00000448530 RTEL1-TNFRSF6BF6WH68 1400 aa31.01■■■□□ 2.55
VCP-203ENST00000448530 KANK4Q5T7N3 995 aaPredicted RBP30.99■■■□□ 2.55
VCP-203ENST00000448530 UHRF1BP1Q6BDS2 1440 aa30.98■■■□□ 2.55
VCP-203ENST00000448530 MROH2AA6NES4 1674 aa30.95■■■□□ 2.55
VCP-203ENST00000448530 GGT6Q6P531 493 aa30.94■■■□□ 2.54
VCP-203ENST00000448530 ILDR1Q86SU0 546 aaPredicted RBP30.94■■■□□ 2.54
VCP-203ENST00000448530 ARHGEF5Q12774 1597 aa30.93■■■□□ 2.54
VCP-203ENST00000448530 TSPY4P0CV99 314 aa30.93■■■□□ 2.54
VCP-203ENST00000448530 TSPY10P0CW01 314 aa30.93■■■□□ 2.54
VCP-203ENST00000448530 CLTCQ00610 1675 aaKnown RBP30.9■■■□□ 2.54
VCP-203ENST00000448530 DHX29Q7Z478 1369 aaKnown RBP30.9■■■□□ 2.54
VCP-203ENST00000448530 MYOM3Q5VTT5 1437 aa30.9■■■□□ 2.54
VCP-203ENST00000448530 ZMYM3Q14202 1370 aa30.89■■■□□ 2.54
VCP-203ENST00000448530 PPP6R1Q9UPN7 881 aa30.87■■■□□ 2.53
VCP-203ENST00000448530 MIA2Q96PC5 1412 aa30.87■■■□□ 2.53
VCP-203ENST00000448530 NPATQ14207 1427 aa30.84■■■□□ 2.53
VCP-203ENST00000448530 KIF3BO15066 747 aa30.82■■■□□ 2.52
VCP-203ENST00000448530 DMRT2Q9Y5R5 561 aa30.78■■■□□ 2.52
VCP-203ENST00000448530 MAST1Q9Y2H9 1570 aa30.77■■■□□ 2.52
VCP-203ENST00000448530 STRCQ7RTU9 1775 aa30.74■■■□□ 2.51
VCP-203ENST00000448530 PTPRKQ15262 1439 aa30.72■■■□□ 2.51
VCP-203ENST00000448530 PTPN23Q9H3S7 1636 aa30.71■■■□□ 2.51
VCP-203ENST00000448530 FAM135AQ9P2D6 1515 aa30.7■■■□□ 2.51
VCP-203ENST00000448530 FBXO41Q8TF61 875 aa30.7■■■□□ 2.51
VCP-203ENST00000448530 KDM5DQ9BY66 1539 aa30.69■■■□□ 2.5
VCP-203ENST00000448530 WASHC2CQ9Y4E1 1318 aa30.69■■■□□ 2.5
VCP-203ENST00000448530 MYO3AQ8NEV4 1616 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms