RNA–Protein interactions for RNA: ENST00000448424.6

ATP7B-206, Transcript of ATPase copper transporting beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP7B, Length 6,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-206ENST00000448424 CARMIL1Q5VZK9 1371 aa11.83□□□□□ -0.52
ATP7B-206ENST00000448424 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
ATP7B-206ENST00000448424 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
ATP7B-206ENST00000448424 SOGA1O94964 1423 aa11.83□□□□□ -0.52
ATP7B-206ENST00000448424 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
ATP7B-206ENST00000448424 GZF1Q9H116 711 aaPredicted RBP11.82□□□□□ -0.52
ATP7B-206ENST00000448424 NRDCO43847 1150 aa11.82□□□□□ -0.52
ATP7B-206ENST00000448424 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
ATP7B-206ENST00000448424 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
ATP7B-206ENST00000448424 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
ATP7B-206ENST00000448424 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
ATP7B-206ENST00000448424 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
ATP7B-206ENST00000448424 VPS53Q5VIR6 699 aa11.81□□□□□ -0.52
ATP7B-206ENST00000448424 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
ATP7B-206ENST00000448424 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
ATP7B-206ENST00000448424 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
ATP7B-206ENST00000448424 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
ATP7B-206ENST00000448424 STK26Q9P289 416 aa11.78□□□□□ -0.52
ATP7B-206ENST00000448424 KNSTRNQ9Y448 316 aa11.78□□□□□ -0.52
ATP7B-206ENST00000448424 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.52
ATP7B-206ENST00000448424 EEA1Q15075 1411 aa11.77□□□□□ -0.53
ATP7B-206ENST00000448424 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
ATP7B-206ENST00000448424 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
ATP7B-206ENST00000448424 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
ATP7B-206ENST00000448424 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
ATP7B-206ENST00000448424 CARD11Q9BXL7 1154 aa11.75□□□□□ -0.53
ATP7B-206ENST00000448424 SRPK2P78362 688 aaKnown RBP11.75□□□□□ -0.53
ATP7B-206ENST00000448424 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
ATP7B-206ENST00000448424 G3V3G9 751 aa11.75□□□□□ -0.53
ATP7B-206ENST00000448424 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
ATP7B-206ENST00000448424 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
ATP7B-206ENST00000448424 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
ATP7B-206ENST00000448424 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
ATP7B-206ENST00000448424 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
ATP7B-206ENST00000448424 HSCBQ8IWL3 235 aa11.73□□□□□ -0.53
ATP7B-206ENST00000448424 RASSF8Q8NHQ8 419 aa11.73□□□□□ -0.53
ATP7B-206ENST00000448424 FOXD4L5Q5VV16 416 aaPredicted RBP11.72□□□□□ -0.53
ATP7B-206ENST00000448424 FOXD4L4Q8WXT5 416 aaPredicted RBP11.72□□□□□ -0.53
ATP7B-206ENST00000448424 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
ATP7B-206ENST00000448424 PES1O00541 588 aaKnown RBP11.71□□□□□ -0.53
ATP7B-206ENST00000448424 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.54
ATP7B-206ENST00000448424 RAD21O60216 631 aa11.7□□□□□ -0.54
ATP7B-206ENST00000448424 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
ATP7B-206ENST00000448424 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
ATP7B-206ENST00000448424 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
ATP7B-206ENST00000448424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
ATP7B-206ENST00000448424 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
ATP7B-206ENST00000448424 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
ATP7B-206ENST00000448424 KIF3BO15066 747 aa11.69□□□□□ -0.54
ATP7B-206ENST00000448424 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
ATP7B-206ENST00000448424 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
ATP7B-206ENST00000448424 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
ATP7B-206ENST00000448424 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
ATP7B-206ENST00000448424 DCAF11Q8TEB1 546 aa11.67□□□□□ -0.54
ATP7B-206ENST00000448424 FHAD1B1AJZ9 1412 aa11.67□□□□□ -0.54
ATP7B-206ENST00000448424 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
ATP7B-206ENST00000448424 MCCP23508 829 aa11.66□□□□□ -0.54
ATP7B-206ENST00000448424 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
ATP7B-206ENST00000448424 GORABQ5T7V8 394 aa11.66□□□□□ -0.54
ATP7B-206ENST00000448424 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
ATP7B-206ENST00000448424 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
ATP7B-206ENST00000448424 MARCH6O60337 910 aa11.66□□□□□ -0.54
ATP7B-206ENST00000448424 CEP89Q96ST8 783 aa11.66□□□□□ -0.54
ATP7B-206ENST00000448424 SLKQ9H2G2 1235 aaPredicted RBP11.66□□□□□ -0.54
ATP7B-206ENST00000448424 PHF23Q9BUL5 403 aaPredicted RBP11.66□□□□□ -0.54
ATP7B-206ENST00000448424 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.54
ATP7B-206ENST00000448424 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
ATP7B-206ENST00000448424 MSH5O43196 834 aa11.64□□□□□ -0.55
ATP7B-206ENST00000448424 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
ATP7B-206ENST00000448424 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
ATP7B-206ENST00000448424 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
ATP7B-206ENST00000448424 CCAR2Q8N163 923 aaKnown RBP11.64□□□□□ -0.55
ATP7B-206ENST00000448424 GOLGA6L1Q8N7Z2 621 aa11.64□□□□□ -0.55
ATP7B-206ENST00000448424 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
ATP7B-206ENST00000448424 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■■■■□ 20.3
ATP7B-206ENST00000448424 DEKP35659 375 aaKnown RBP11.63□□□□□ -0.55
ATP7B-206ENST00000448424 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
ATP7B-206ENST00000448424 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
ATP7B-206ENST00000448424 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
ATP7B-206ENST00000448424 SPAG9O60271 1321 aaKnown RBP11.62□□□□□ -0.55
ATP7B-206ENST00000448424 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
ATP7B-206ENST00000448424 PTMSP20962 102 aa11.61□□□□□ -0.55
ATP7B-206ENST00000448424 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
ATP7B-206ENST00000448424 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
ATP7B-206ENST00000448424 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
ATP7B-206ENST00000448424 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
ATP7B-206ENST00000448424 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
ATP7B-206ENST00000448424 TMF1P82094 1093 aa11.58□□□□□ -0.56
ATP7B-206ENST00000448424 PKD2Q13563 968 aa11.57□□□□□ -0.56
ATP7B-206ENST00000448424 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
ATP7B-206ENST00000448424 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
ATP7B-206ENST00000448424 PTPRGP23470 1445 aa11.57□□□□□ -0.56
ATP7B-206ENST00000448424 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
ATP7B-206ENST00000448424 ITPRIPQ8IWB1 547 aa11.57□□□□□ -0.56
ATP7B-206ENST00000448424 TPM4P67936 248 aa11.56□□□□□ -0.56
ATP7B-206ENST00000448424 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
ATP7B-206ENST00000448424 LTV1Q96GA3 475 aaPredicted RBP11.55□□□□□ -0.56
ATP7B-206ENST00000448424 TPD52L1Q16890 204 aaPredicted RBP11.55□□□□□ -0.56
ATP7B-206ENST00000448424 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
ATP7B-206ENST00000448424 MORC1Q86VD1 984 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms