RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 RICTORQ6R327 1708 aa39.67■■■■□ 3.94
UFD1-204ENST00000447868 PREX2Q70Z35 1606 aa39.66■■■■□ 3.94
UFD1-204ENST00000447868 SCAPERQ9BY12 1400 aa39.65■■■■□ 3.94
UFD1-204ENST00000447868 CDC42BPAQ5VT25 1732 aa39.63■■■■□ 3.94
UFD1-204ENST00000447868 EHBP1L1Q8N3D4 1523 aa39.61■■■■□ 3.93
UFD1-204ENST00000447868 KDM4FA0A1W2PPD8 638 aa39.58■■■■□ 3.93
UFD1-204ENST00000447868 TIAM1Q13009 1591 aa39.58■■■■□ 3.93
UFD1-204ENST00000447868 POGZQ7Z3K3 1410 aa39.55■■■■□ 3.92
UFD1-204ENST00000447868 GPATCH8Q9UKJ3 1502 aaKnown RBP39.54■■■■□ 3.92
UFD1-204ENST00000447868 CCNB3Q8WWL7 1395 aa39.52■■■■□ 3.92
UFD1-204ENST00000447868 ZMYM4Q5VZL5 1548 aa39.5■■■■□ 3.91
UFD1-204ENST00000447868 ZNF777Q9ULD5 760 aaPredicted RBP39.48■■■■□ 3.91
UFD1-204ENST00000447868 ARHGEF40Q8TER5 1519 aa39.45■■■■□ 3.91
UFD1-204ENST00000447868 ABCC1P33527 1531 aa39.44■■■■□ 3.9
UFD1-204ENST00000447868 CFDP1Q9UEE9 299 aaPredicted RBP39.43■■■■□ 3.9
UFD1-204ENST00000447868 SUPT6HQ7KZ85 1726 aaKnown RBP39.43■■■■□ 3.9
UFD1-204ENST00000447868 ZFYVE16Q7Z3T8 1539 aa39.42■■■■□ 3.9
UFD1-204ENST00000447868 ZNF518AQ6AHZ1 1483 aa39.42■■■■□ 3.9
UFD1-204ENST00000447868 AFAP1Q8N556 730 aa39.41■■■■□ 3.9
UFD1-204ENST00000447868 LRRC9Q6ZRR7 1453 aa39.41■■■■□ 3.9
UFD1-204ENST00000447868 YEATS2Q9ULM3 1422 aa39.4■■■■□ 3.9
UFD1-204ENST00000447868 ARHGEF12Q9NZN5 1544 aa39.4■■■■□ 3.9
UFD1-204ENST00000447868 SAMD9LQ8IVG5 1584 aa39.4■■■■□ 3.9
UFD1-204ENST00000447868 ITSN2Q9NZM3 1697 aa39.4■■■■□ 3.9
UFD1-204ENST00000447868 MAGI2Q86UL8 1455 aa39.39■■■■□ 3.9
UFD1-204ENST00000447868 MAP3K1Q13233 1512 aa39.39■■■■□ 3.9
UFD1-204ENST00000447868 NCOA2Q15596 1464 aa39.38■■■■□ 3.9
UFD1-204ENST00000447868 TRAPPC8Q9Y2L5 1435 aa39.35■■■■□ 3.89
UFD1-204ENST00000447868 KANK4Q5T7N3 995 aaPredicted RBP39.35■■■■□ 3.89
UFD1-204ENST00000447868 KDM5CP41229 1560 aa39.34■■■■□ 3.89
UFD1-204ENST00000447868 APLP2Q06481 763 aa39.34■■■■□ 3.89
UFD1-204ENST00000447868 ARID4BQ4LE39 1312 aaPredicted RBP39.33■■■■□ 3.89
UFD1-204ENST00000447868 MYT1LQ9UL68 1186 aa39.32■■■■□ 3.89
UFD1-204ENST00000447868 SYCP2Q9BX26 1530 aa39.31■■■■□ 3.88
UFD1-204ENST00000447868 HNRNPMP52272 730 aaKnown RBP eCLIP39.28■■■■□ 3.88
UFD1-204ENST00000447868 HECW2Q9P2P5 1572 aa39.27■■■■□ 3.88
UFD1-204ENST00000447868 PLEKHH2Q8IVE3 1493 aa39.25■■■■□ 3.87
UFD1-204ENST00000447868 ZNF644Q9H582 1327 aaPredicted RBP39.24■■■■□ 3.87
UFD1-204ENST00000447868 KIAA1107Q9UPP5 1409 aa39.23■■■■□ 3.87
UFD1-204ENST00000447868 ATP10AO60312 1499 aa39.22■■■■□ 3.87
UFD1-204ENST00000447868 SIGLEC1Q9BZZ2 1709 aa39.21■■■■□ 3.87
UFD1-204ENST00000447868 MLH3Q9UHC1 1453 aa39.2■■■■□ 3.87
UFD1-204ENST00000447868 BCORL1Q5H9F3 1711 aa39.18■■■■□ 3.86
UFD1-204ENST00000447868 C9orf84Q5VXU9 1444 aa39.17■■■■□ 3.86
UFD1-204ENST00000447868 DIP2CQ9Y2E4 1556 aa39.15■■■■□ 3.86
UFD1-204ENST00000447868 ADAMTSL3P82987 1691 aa39.15■■■■□ 3.86
UFD1-204ENST00000447868 ABCA6Q8N139 1617 aa39.14■■■■□ 3.86
UFD1-204ENST00000447868 KIDINS220Q9ULH0 1771 aa39.13■■■■□ 3.85
UFD1-204ENST00000447868 SPAG9O60271 1321 aaKnown RBP39.12■■■■□ 3.85
UFD1-204ENST00000447868 CAMSAP2Q08AD1 1489 aa39.11■■■■□ 3.85
UFD1-204ENST00000447868 MBD5Q9P267 1494 aa39.07■■■■□ 3.85
UFD1-204ENST00000447868 MLECQ14165 292 aa39.07■■■■□ 3.85
UFD1-204ENST00000447868 MADDQ8WXG6 1647 aa39.06■■■■□ 3.84
UFD1-204ENST00000447868 MYOM3Q5VTT5 1437 aa39.04■■■■□ 3.84
UFD1-204ENST00000447868 ATP7AQ04656 1500 aa39.03■■■■□ 3.84
UFD1-204ENST00000447868 REREQ9P2R6 1566 aa39■■■■□ 3.83
UFD1-204ENST00000447868 INO80Q9ULG1 1556 aaPredicted RBP39■■■■□ 3.83
UFD1-204ENST00000447868 PTPRMP28827 1452 aa38.96■■■■□ 3.83
UFD1-204ENST00000447868 RIMS1Q86UR5 1692 aaKnown RBP38.96■■■■□ 3.83
UFD1-204ENST00000447868 CCDC141Q6ZP82 1450 aa38.95■■■■□ 3.83
UFD1-204ENST00000447868 MIA2Q96PC5 1412 aa38.95■■■■□ 3.83
UFD1-204ENST00000447868 RSPH4AQ5TD94 716 aa38.9■■■■□ 3.82
UFD1-204ENST00000447868 ARHGEF5Q12774 1597 aa38.9■■■■□ 3.82
UFD1-204ENST00000447868 FER1L4A9Z1Z3 1794 aa38.9■■■■□ 3.82
UFD1-204ENST00000447868 AGLP35573 1532 aa38.88■■■■□ 3.81
UFD1-204ENST00000447868 RTEL1-TNFRSF6BF6WH68 1400 aa38.86■■■■□ 3.81
UFD1-204ENST00000447868 A2MP01023 1474 aa38.84■■■■□ 3.81
UFD1-204ENST00000447868 PLPPR3Q6T4P5 718 aa38.83■■■■□ 3.81
UFD1-204ENST00000447868 PTPN23Q9H3S7 1636 aa38.82■■■■□ 3.81
UFD1-204ENST00000447868 ADGBQ8N7X0 1667 aa38.82■■■■□ 3.81
UFD1-204ENST00000447868 TSPY4P0CV99 314 aa38.81■■■■□ 3.8
UFD1-204ENST00000447868 TSPY10P0CW01 314 aa38.81■■■■□ 3.8
UFD1-204ENST00000447868 FGD6Q6ZV73 1430 aa38.8■■■■□ 3.8
UFD1-204ENST00000447868 PLXNC1O60486 1568 aa38.78■■■■□ 3.8
UFD1-204ENST00000447868 PPARGC1BQ86YN6 1023 aaKnown RBP38.72■■■■□ 3.79
UFD1-204ENST00000447868 TCOF1Q13428 1488 aaKnown RBP38.7■■■■□ 3.79
UFD1-204ENST00000447868 ESF1Q9H501 851 aaKnown RBP38.69■■■■□ 3.78
UFD1-204ENST00000447868 MAST1Q9Y2H9 1570 aa38.69■■■■□ 3.78
UFD1-204ENST00000447868 DHX29Q7Z478 1369 aaKnown RBP38.69■■■■□ 3.78
UFD1-204ENST00000447868 CEBPAP49715 358 aaPredicted RBP38.64■■■■□ 3.78
UFD1-204ENST00000447868 ABCC5O15440 1437 aa38.63■■■■□ 3.78
UFD1-204ENST00000447868 GGT6Q6P531 493 aa38.63■■■■□ 3.77
UFD1-204ENST00000447868 CROCC2H7BZ55 1655 aa38.62■■■■□ 3.77
UFD1-204ENST00000447868 DNMT1P26358 1616 aaKnown RBP38.6■■■■□ 3.77
UFD1-204ENST00000447868 FAM50AQ14320 339 aaKnown RBP38.6■■■■□ 3.77
UFD1-204ENST00000447868 DAPK1P53355 1430 aa38.6■■■■□ 3.77
UFD1-204ENST00000447868 SHANK2Q9UPX8 1470 aa38.56■■■■□ 3.76
UFD1-204ENST00000447868 KIF3BO15066 747 aa38.56■■■■□ 3.76
UFD1-204ENST00000447868 CNTLNQ9NXG0 1405 aa38.55■■■■□ 3.76
UFD1-204ENST00000447868 C3P01024 1663 aa38.54■■■■□ 3.76
UFD1-204ENST00000447868 CLTCQ00610 1675 aaKnown RBP38.52■■■■□ 3.76
UFD1-204ENST00000447868 CHIC2Q9UKJ5 165 aa38.49■■■■□ 3.75
UFD1-204ENST00000447868 MROH2AA6NES4 1674 aa38.47■■■■□ 3.75
UFD1-204ENST00000447868 LMTK3Q96Q04 1460 aa38.47■■■■□ 3.75
UFD1-204ENST00000447868 RRP7BPQ9NSQ0 103 aa38.46■■■■□ 3.75
UFD1-204ENST00000447868 PPP6R1Q9UPN7 881 aa38.45■■■■□ 3.75
UFD1-204ENST00000447868 KIF15Q9NS87 1388 aa38.44■■■■□ 3.74
UFD1-204ENST00000447868 ZMYM3Q14202 1370 aa38.44■■■■□ 3.74
UFD1-204ENST00000447868 DUOX2Q9NRD8 1548 aa38.43■■■■□ 3.74
UFD1-204ENST00000447868 EIF2AK4Q9P2K8 1649 aaKnown RBP38.39■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms