RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 MAGI2Q86UL8 1455 aa25.81■■□□□ 1.72
SPTLC1P1-201ENST00000447199 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
SPTLC1P1-201ENST00000447199 YEATS2Q9ULM3 1422 aa25.8■■□□□ 1.72
SPTLC1P1-201ENST00000447199 BCORL1Q5H9F3 1711 aa25.78■■□□□ 1.72
SPTLC1P1-201ENST00000447199 HECW2Q9P2P5 1572 aa25.78■■□□□ 1.72
SPTLC1P1-201ENST00000447199 ZFYVE16Q7Z3T8 1539 aa25.77■■□□□ 1.72
SPTLC1P1-201ENST00000447199 PTPRMP28827 1452 aa25.76■■□□□ 1.71
SPTLC1P1-201ENST00000447199 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
SPTLC1P1-201ENST00000447199 ARHGAP5Q13017 1502 aa25.73■■□□□ 1.71
SPTLC1P1-201ENST00000447199 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
SPTLC1P1-201ENST00000447199 MADDQ8WXG6 1647 aa25.7■■□□□ 1.71
SPTLC1P1-201ENST00000447199 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
SPTLC1P1-201ENST00000447199 ZNF518AQ6AHZ1 1483 aa25.68■■□□□ 1.7
SPTLC1P1-201ENST00000447199 PREX2Q70Z35 1606 aa25.67■■□□□ 1.7
SPTLC1P1-201ENST00000447199 KDM5CP41229 1560 aa25.67■■□□□ 1.7
SPTLC1P1-201ENST00000447199 ATP10AO60312 1499 aa25.65■■□□□ 1.7
SPTLC1P1-201ENST00000447199 AFAP1Q8N556 730 aa25.64■■□□□ 1.7
SPTLC1P1-201ENST00000447199 ARHGEF12Q9NZN5 1544 aa25.63■■□□□ 1.69
SPTLC1P1-201ENST00000447199 ABCC1P33527 1531 aa25.62■■□□□ 1.69
SPTLC1P1-201ENST00000447199 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
SPTLC1P1-201ENST00000447199 C9orf84Q5VXU9 1444 aa25.62■■□□□ 1.69
SPTLC1P1-201ENST00000447199 TRAPPC8Q9Y2L5 1435 aa25.59■■□□□ 1.69
SPTLC1P1-201ENST00000447199 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
SPTLC1P1-201ENST00000447199 MLH3Q9UHC1 1453 aa25.58■■□□□ 1.69
SPTLC1P1-201ENST00000447199 RIMS1Q86UR5 1692 aaKnown RBP25.58■■□□□ 1.68
SPTLC1P1-201ENST00000447199 GPATCH8Q9UKJ3 1502 aaKnown RBP25.58■■□□□ 1.68
SPTLC1P1-201ENST00000447199 DIP2CQ9Y2E4 1556 aa25.54■■□□□ 1.68
SPTLC1P1-201ENST00000447199 ITSN2Q9NZM3 1697 aa25.54■■□□□ 1.68
SPTLC1P1-201ENST00000447199 REREQ9P2R6 1566 aa25.52■■□□□ 1.68
SPTLC1P1-201ENST00000447199 MLECQ14165 292 aa25.52■■□□□ 1.68
SPTLC1P1-201ENST00000447199 SAMD9LQ8IVG5 1584 aa25.51■■□□□ 1.67
SPTLC1P1-201ENST00000447199 MTUS2Q5JR59 1369 aa25.5■■□□□ 1.67
SPTLC1P1-201ENST00000447199 ABCA6Q8N139 1617 aa25.5■■□□□ 1.67
SPTLC1P1-201ENST00000447199 LMTK3Q96Q04 1460 aa25.5■■□□□ 1.67
SPTLC1P1-201ENST00000447199 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
SPTLC1P1-201ENST00000447199 SYCP2Q9BX26 1530 aa25.46■■□□□ 1.67
SPTLC1P1-201ENST00000447199 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
SPTLC1P1-201ENST00000447199 CCNB3Q8WWL7 1395 aa25.45■■□□□ 1.67
SPTLC1P1-201ENST00000447199 ZNF777Q9ULD5 760 aaPredicted RBP25.45■■□□□ 1.66
SPTLC1P1-201ENST00000447199 EHBP1L1Q8N3D4 1523 aa25.45■■□□□ 1.66
SPTLC1P1-201ENST00000447199 KIDINS220Q9ULH0 1771 aa25.45■■□□□ 1.66
SPTLC1P1-201ENST00000447199 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
SPTLC1P1-201ENST00000447199 CFDP1Q9UEE9 299 aaPredicted RBP25.44■■□□□ 1.66
SPTLC1P1-201ENST00000447199 MYT1LQ9UL68 1186 aa25.44■■□□□ 1.66
SPTLC1P1-201ENST00000447199 AGLP35573 1532 aa25.43■■□□□ 1.66
SPTLC1P1-201ENST00000447199 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
SPTLC1P1-201ENST00000447199 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
SPTLC1P1-201ENST00000447199 HNRNPMP52272 730 aaKnown RBP eCLIP25.41■■□□□ 1.66
SPTLC1P1-201ENST00000447199 PLPPR3Q6T4P5 718 aa25.38■■□□□ 1.65
SPTLC1P1-201ENST00000447199 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
SPTLC1P1-201ENST00000447199 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
SPTLC1P1-201ENST00000447199 ZNF644Q9H582 1327 aaPredicted RBP25.34■■□□□ 1.65
SPTLC1P1-201ENST00000447199 CEBPAP49715 358 aaPredicted RBP25.33■■□□□ 1.65
SPTLC1P1-201ENST00000447199 ILDR1Q86SU0 546 aaPredicted RBP25.33■■□□□ 1.65
SPTLC1P1-201ENST00000447199 INO80Q9ULG1 1556 aaPredicted RBP25.33■■□□□ 1.65
SPTLC1P1-201ENST00000447199 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
SPTLC1P1-201ENST00000447199 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
SPTLC1P1-201ENST00000447199 HSPA2P54652 639 aa25.32■■□□□ 1.64
SPTLC1P1-201ENST00000447199 NCOA2Q15596 1464 aa25.31■■□□□ 1.64
SPTLC1P1-201ENST00000447199 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
SPTLC1P1-201ENST00000447199 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
SPTLC1P1-201ENST00000447199 LRRC9Q6ZRR7 1453 aa25.25■■□□□ 1.63
SPTLC1P1-201ENST00000447199 PREX1Q8TCU6 1659 aa25.24■■□□□ 1.63
SPTLC1P1-201ENST00000447199 A2MP01023 1474 aa25.24■■□□□ 1.63
SPTLC1P1-201ENST00000447199 CNTLNQ9NXG0 1405 aa25.23■■□□□ 1.63
SPTLC1P1-201ENST00000447199 C3P01024 1663 aa25.23■■□□□ 1.63
SPTLC1P1-201ENST00000447199 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
SPTLC1P1-201ENST00000447199 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
SPTLC1P1-201ENST00000447199 ESF1Q9H501 851 aaKnown RBP25.2■■□□□ 1.62
SPTLC1P1-201ENST00000447199 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
SPTLC1P1-201ENST00000447199 UHRF1BP1Q6BDS2 1440 aa25.18■■□□□ 1.62
SPTLC1P1-201ENST00000447199 CCDC141Q6ZP82 1450 aa25.17■■□□□ 1.62
SPTLC1P1-201ENST00000447199 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
SPTLC1P1-201ENST00000447199 ADGBQ8N7X0 1667 aa25.16■■□□□ 1.62
SPTLC1P1-201ENST00000447199 SETD1BQ9UPS6 1966 aaKnown RBP25.15■■□□□ 1.62
SPTLC1P1-201ENST00000447199 MROH2AA6NES4 1674 aa25.14■■□□□ 1.62
SPTLC1P1-201ENST00000447199 RSPH4AQ5TD94 716 aa25.13■■□□□ 1.61
SPTLC1P1-201ENST00000447199 ZMYM3Q14202 1370 aa25.13■■□□□ 1.61
SPTLC1P1-201ENST00000447199 DHX29Q7Z478 1369 aaKnown RBP25.13■■□□□ 1.61
SPTLC1P1-201ENST00000447199 NPATQ14207 1427 aa25.12■■□□□ 1.61
SPTLC1P1-201ENST00000447199 ARHGEF5Q12774 1597 aa25.11■■□□□ 1.61
SPTLC1P1-201ENST00000447199 PPP6R1Q9UPN7 881 aa25.09■■□□□ 1.61
SPTLC1P1-201ENST00000447199 GGT6Q6P531 493 aa25.08■■□□□ 1.61
SPTLC1P1-201ENST00000447199 STRCQ7RTU9 1775 aa25.06■■□□□ 1.6
SPTLC1P1-201ENST00000447199 FBXO41Q8TF61 875 aa25.06■■□□□ 1.6
SPTLC1P1-201ENST00000447199 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
SPTLC1P1-201ENST00000447199 MIA2Q96PC5 1412 aa25.05■■□□□ 1.6
SPTLC1P1-201ENST00000447199 MYOM3Q5VTT5 1437 aa25.04■■□□□ 1.6
SPTLC1P1-201ENST00000447199 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
SPTLC1P1-201ENST00000447199 TSPY4P0CV99 314 aa25■■□□□ 1.59
SPTLC1P1-201ENST00000447199 TSPY10P0CW01 314 aa25■■□□□ 1.59
SPTLC1P1-201ENST00000447199 MAST1Q9Y2H9 1570 aa24.99■■□□□ 1.59
SPTLC1P1-201ENST00000447199 DMRT2Q9Y5R5 561 aa24.99■■□□□ 1.59
SPTLC1P1-201ENST00000447199 NCOA1Q15788 1441 aa24.98■■□□□ 1.59
SPTLC1P1-201ENST00000447199 KIF3BO15066 747 aa24.98■■□□□ 1.59
SPTLC1P1-201ENST00000447199 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
SPTLC1P1-201ENST00000447199 PTPRTO14522 1441 aa24.96■■□□□ 1.59
SPTLC1P1-201ENST00000447199 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
SPTLC1P1-201ENST00000447199 KDM5DQ9BY66 1539 aa24.93■■□□□ 1.58
SPTLC1P1-201ENST00000447199 CERKQ8TCT0 537 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms