RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ERICH6BQ5W0A0 696 aa26.42■■□□□ 1.82
SDCBP-204ENST00000447182 TEX14Q8IWB6 1497 aa26.41■■□□□ 1.82
SDCBP-204ENST00000447182 POLR1AO95602 1720 aaPredicted RBP26.39■■□□□ 1.81
SDCBP-204ENST00000447182 ABCC5O15440 1437 aa26.39■■□□□ 1.81
SDCBP-204ENST00000447182 PRKRIP1Q9H875 184 aaPredicted RBP26.36■■□□□ 1.81
SDCBP-204ENST00000447182 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
SDCBP-204ENST00000447182 C11orf95C9JLR9 678 aaPredicted RBP26.35■■□□□ 1.81
SDCBP-204ENST00000447182 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
SDCBP-204ENST00000447182 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
SDCBP-204ENST00000447182 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
SDCBP-204ENST00000447182 FOXD1Q16676 465 aa26.33■■□□□ 1.81
SDCBP-204ENST00000447182 KIAA0586Q9BVV6 1533 aa26.33■■□□□ 1.8
SDCBP-204ENST00000447182 DISP1Q96F81 1524 aa26.32■■□□□ 1.8
SDCBP-204ENST00000447182 NBPF8Q3BBV2 869 aa26.32■■□□□ 1.8
SDCBP-204ENST00000447182 NUP153P49790 1475 aaKnown RBP26.31■■□□□ 1.8
SDCBP-204ENST00000447182 CCDC184Q52MB2 194 aa26.3■■□□□ 1.8
SDCBP-204ENST00000447182 RAPGEF6Q8TEU7 1601 aa26.29■■□□□ 1.8
SDCBP-204ENST00000447182 ZBED9Q6R2W3 1325 aa26.26■■□□□ 1.79
SDCBP-204ENST00000447182 CDK11AQ9UQ88 783 aaPredicted RBP26.26■■□□□ 1.79
SDCBP-204ENST00000447182 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
SDCBP-204ENST00000447182 ARID3CA6NKF2 412 aa26.24■■□□□ 1.79
SDCBP-204ENST00000447182 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
SDCBP-204ENST00000447182 KIF7Q2M1P5 1343 aa26.24■■□□□ 1.79
SDCBP-204ENST00000447182 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
SDCBP-204ENST00000447182 PZPP20742 1482 aa26.23■■□□□ 1.79
SDCBP-204ENST00000447182 MRS2Q9HD23 443 aa26.23■■□□□ 1.79
SDCBP-204ENST00000447182 PPP4R2Q9NY27 417 aa26.23■■□□□ 1.79
SDCBP-204ENST00000447182 ZNF644Q9H582 1327 aaPredicted RBP26.22■■□□□ 1.79
SDCBP-204ENST00000447182 IRX6P78412 446 aaPredicted RBP26.22■■□□□ 1.79
SDCBP-204ENST00000447182 ADGBQ8N7X0 1667 aa26.21■■□□□ 1.79
SDCBP-204ENST00000447182 MBD5Q9P267 1494 aa26.2■■□□□ 1.78
SDCBP-204ENST00000447182 ITSN2Q9NZM3 1697 aa26.19■■□□□ 1.78
SDCBP-204ENST00000447182 TROQ12816 1431 aaPredicted RBP26.18■■□□□ 1.78
SDCBP-204ENST00000447182 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
SDCBP-204ENST00000447182 FAM9BQ8IZU0 186 aa26.18■■□□□ 1.78
SDCBP-204ENST00000447182 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
SDCBP-204ENST00000447182 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
SDCBP-204ENST00000447182 GRIN2AQ12879 1464 aa26.16■■□□□ 1.78
SDCBP-204ENST00000447182 MSH5O43196 834 aa26.14■■□□□ 1.78
SDCBP-204ENST00000447182 ADCY10Q96PN6 1610 aa26.14■■□□□ 1.78
SDCBP-204ENST00000447182 CROCC2H7BZ55 1655 aa26.13■■□□□ 1.77
SDCBP-204ENST00000447182 KIAA1107Q9UPP5 1409 aa26.13■■□□□ 1.77
SDCBP-204ENST00000447182 GPATCH8Q9UKJ3 1502 aaKnown RBP26.11■■□□□ 1.77
SDCBP-204ENST00000447182 PRG4Q92954 1404 aaPredicted RBP26.11■■□□□ 1.77
SDCBP-204ENST00000447182 DHX29Q7Z478 1369 aaKnown RBP26.1■■□□□ 1.77
SDCBP-204ENST00000447182 KIF14Q15058 1648 aa26.09■■□□□ 1.77
SDCBP-204ENST00000447182 ARID4BQ4LE39 1312 aaPredicted RBP26.09■■□□□ 1.77
SDCBP-204ENST00000447182 CFDP1Q9UEE9 299 aaPredicted RBP26.09■■□□□ 1.77
SDCBP-204ENST00000447182 BCORL1Q5H9F3 1711 aa26.06■■□□□ 1.76
SDCBP-204ENST00000447182 USP47Q96K76 1375 aa26.05■■□□□ 1.76
SDCBP-204ENST00000447182 EIF4G3O43432 1585 aaKnown RBP26.05■■□□□ 1.76
SDCBP-204ENST00000447182 KDM5CP41229 1560 aa26.04■■□□□ 1.76
SDCBP-204ENST00000447182 SMG6Q86US8 1419 aaKnown RBP26.04■■□□□ 1.76
SDCBP-204ENST00000447182 ANKRD30AQ9BXX3 1397 aa26.03■■□□□ 1.76
SDCBP-204ENST00000447182 UHRF1BP1Q6BDS2 1440 aa26.02■■□□□ 1.76
SDCBP-204ENST00000447182 PLB1Q6P1J6 1458 aa26■■□□□ 1.75
SDCBP-204ENST00000447182 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
SDCBP-204ENST00000447182 PKD2Q13563 968 aa25.98■■□□□ 1.75
SDCBP-204ENST00000447182 RALGAPBQ86X10 1494 aa25.97■■□□□ 1.75
SDCBP-204ENST00000447182 ANKRD50Q9ULJ7 1429 aa25.97■■□□□ 1.75
SDCBP-204ENST00000447182 ROCK2O75116 1388 aaKnown RBP25.97■■□□□ 1.75
SDCBP-204ENST00000447182 SHANK2Q9UPX8 1470 aa25.97■■□□□ 1.75
SDCBP-204ENST00000447182 CEP170Q5SW79 1584 aa25.97■■□□□ 1.75
SDCBP-204ENST00000447182 ARHGEF12Q9NZN5 1544 aa25.95■■□□□ 1.75
SDCBP-204ENST00000447182 B4GALNT3Q6L9W6 998 aa25.95■■□□□ 1.74
SDCBP-204ENST00000447182 RNF123Q5XPI4 1314 aa25.95■■□□□ 1.74
SDCBP-204ENST00000447182 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
SDCBP-204ENST00000447182 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
SDCBP-204ENST00000447182 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
SDCBP-204ENST00000447182 CARMIL2Q6F5E8 1435 aa25.91■■□□□ 1.74
SDCBP-204ENST00000447182 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
SDCBP-204ENST00000447182 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
SDCBP-204ENST00000447182 ABCC10Q5T3U5 1492 aa25.88■■□□□ 1.73
SDCBP-204ENST00000447182 C9orf84Q5VXU9 1444 aa25.87■■□□□ 1.73
SDCBP-204ENST00000447182 ZNF326Q5BKZ1 582 aaKnown RBP25.86■■□□□ 1.73
SDCBP-204ENST00000447182 ERICH6Q7L0X2 663 aa25.86■■□□□ 1.73
SDCBP-204ENST00000447182 NUP160Q12769 1436 aa25.85■■□□□ 1.73
SDCBP-204ENST00000447182 PNISRQ8TF01 805 aaKnown RBP25.85■■□□□ 1.73
SDCBP-204ENST00000447182 NUP155O75694 1391 aa25.85■■□□□ 1.73
SDCBP-204ENST00000447182 ABCA8O94911 1581 aa25.84■■□□□ 1.73
SDCBP-204ENST00000447182 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
SDCBP-204ENST00000447182 PTPRGP23470 1445 aa25.83■■□□□ 1.73
SDCBP-204ENST00000447182 KTN1Q86UP2 1357 aaKnown RBP25.83■■□□□ 1.73
SDCBP-204ENST00000447182 KIF15Q9NS87 1388 aa25.83■■□□□ 1.72
SDCBP-204ENST00000447182 CARD11Q9BXL7 1154 aa25.81■■□□□ 1.72
SDCBP-204ENST00000447182 PLEKHD1A6NEE1 506 aa25.8■■□□□ 1.72
SDCBP-204ENST00000447182 JPH4Q96JJ6 628 aa25.8■■□□□ 1.72
SDCBP-204ENST00000447182 POLR3GLQ9BT43 218 aa25.8■■□□□ 1.72
SDCBP-204ENST00000447182 BCL11AQ9H165 835 aa25.8■■□□□ 1.72
SDCBP-204ENST00000447182 LRPPRCP42704 1394 aaKnown RBP25.79■■□□□ 1.72
SDCBP-204ENST00000447182 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
SDCBP-204ENST00000447182 E9PCH4 1651 aa25.79■■□□□ 1.72
SDCBP-204ENST00000447182 ATP10BO94823 1461 aa25.78■■□□□ 1.72
SDCBP-204ENST00000447182 BRD4O60885 1362 aaPredicted RBP25.77■■□□□ 1.72
SDCBP-204ENST00000447182 TMC1Q8TDI8 760 aa25.77■■□□□ 1.72
SDCBP-204ENST00000447182 TSPY4P0CV99 314 aa25.74■■□□□ 1.71
SDCBP-204ENST00000447182 TSPY10P0CW01 314 aa25.74■■□□□ 1.71
SDCBP-204ENST00000447182 RALBP1Q15311 655 aa25.74■■□□□ 1.71
SDCBP-204ENST00000447182 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
SDCBP-204ENST00000447182 MYBBP1AQ9BQG0 1328 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms