RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 POGZQ7Z3K3 1410 aa25.13■■□□□ 1.61
HMGB2-203ENST00000446922 ADAMTSL3P82987 1691 aa25.13■■□□□ 1.61
HMGB2-203ENST00000446922 ARID4BQ4LE39 1312 aaPredicted RBP25.12■■□□□ 1.61
HMGB2-203ENST00000446922 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
HMGB2-203ENST00000446922 BCORL1Q5H9F3 1711 aa25.09■■□□□ 1.61
HMGB2-203ENST00000446922 ARHGAP5Q13017 1502 aa25.08■■□□□ 1.61
HMGB2-203ENST00000446922 ZNF518AQ6AHZ1 1483 aa25.07■■□□□ 1.6
HMGB2-203ENST00000446922 PTPRMP28827 1452 aa25.06■■□□□ 1.6
HMGB2-203ENST00000446922 YEATS2Q9ULM3 1422 aa25.04■■□□□ 1.6
HMGB2-203ENST00000446922 ATP10AO60312 1499 aa25.02■■□□□ 1.6
HMGB2-203ENST00000446922 CDC42BPBQ9Y5S2 1711 aa25.02■■□□□ 1.6
HMGB2-203ENST00000446922 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
HMGB2-203ENST00000446922 PREX2Q70Z35 1606 aa25.01■■□□□ 1.59
HMGB2-203ENST00000446922 KDM5CP41229 1560 aa24.99■■□□□ 1.59
HMGB2-203ENST00000446922 AFAP1Q8N556 730 aa24.99■■□□□ 1.59
HMGB2-203ENST00000446922 CEP162Q5TB80 1403 aa24.97■■□□□ 1.59
HMGB2-203ENST00000446922 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
HMGB2-203ENST00000446922 MADDQ8WXG6 1647 aa24.97■■□□□ 1.59
HMGB2-203ENST00000446922 MLH3Q9UHC1 1453 aa24.96■■□□□ 1.59
HMGB2-203ENST00000446922 CDC42BPAQ5VT25 1732 aa24.93■■□□□ 1.58
HMGB2-203ENST00000446922 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
HMGB2-203ENST00000446922 ABCC1P33527 1531 aa24.92■■□□□ 1.58
HMGB2-203ENST00000446922 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
HMGB2-203ENST00000446922 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
HMGB2-203ENST00000446922 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
HMGB2-203ENST00000446922 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.57
HMGB2-203ENST00000446922 TRAPPC8Q9Y2L5 1435 aa24.88■■□□□ 1.57
HMGB2-203ENST00000446922 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
HMGB2-203ENST00000446922 KIAA1107Q9UPP5 1409 aa24.87■■□□□ 1.57
HMGB2-203ENST00000446922 CCNB3Q8WWL7 1395 aa24.87■■□□□ 1.57
HMGB2-203ENST00000446922 RIMS1Q86UR5 1692 aaKnown RBP24.87■■□□□ 1.57
HMGB2-203ENST00000446922 ITSN2Q9NZM3 1697 aa24.87■■□□□ 1.57
HMGB2-203ENST00000446922 PLEKHH2Q8IVE3 1493 aa24.86■■□□□ 1.57
HMGB2-203ENST00000446922 CFDP1Q9UEE9 299 aaPredicted RBP24.86■■□□□ 1.57
HMGB2-203ENST00000446922 MLECQ14165 292 aa24.85■■□□□ 1.57
HMGB2-203ENST00000446922 ZNF777Q9ULD5 760 aaPredicted RBP24.84■■□□□ 1.57
HMGB2-203ENST00000446922 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
HMGB2-203ENST00000446922 EHBP1L1Q8N3D4 1523 aa24.82■■□□□ 1.56
HMGB2-203ENST00000446922 AGLP35573 1532 aa24.81■■□□□ 1.56
HMGB2-203ENST00000446922 SAMD9LQ8IVG5 1584 aa24.81■■□□□ 1.56
HMGB2-203ENST00000446922 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
HMGB2-203ENST00000446922 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
HMGB2-203ENST00000446922 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
HMGB2-203ENST00000446922 ABCA6Q8N139 1617 aa24.78■■□□□ 1.56
HMGB2-203ENST00000446922 KIDINS220Q9ULH0 1771 aa24.77■■□□□ 1.56
HMGB2-203ENST00000446922 SPAG9O60271 1321 aaKnown RBP24.77■■□□□ 1.56
HMGB2-203ENST00000446922 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
HMGB2-203ENST00000446922 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
HMGB2-203ENST00000446922 VPS8Q8N3P4 1428 aa24.74■■□□□ 1.55
HMGB2-203ENST00000446922 TIAM1Q13009 1591 aa24.73■■□□□ 1.55
HMGB2-203ENST00000446922 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
HMGB2-203ENST00000446922 ESF1Q9H501 851 aaKnown RBP24.69■■□□□ 1.54
HMGB2-203ENST00000446922 SUPT6HQ7KZ85 1726 aaKnown RBP24.68■■□□□ 1.54
HMGB2-203ENST00000446922 ATP7AQ04656 1500 aa24.67■■□□□ 1.54
HMGB2-203ENST00000446922 MAP3K1Q13233 1512 aa24.67■■□□□ 1.54
HMGB2-203ENST00000446922 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
HMGB2-203ENST00000446922 NCOA2Q15596 1464 aa24.66■■□□□ 1.54
HMGB2-203ENST00000446922 MBD5Q9P267 1494 aa24.66■■□□□ 1.54
HMGB2-203ENST00000446922 PLPPR3Q6T4P5 718 aa24.66■■□□□ 1.54
HMGB2-203ENST00000446922 RTEL1-TNFRSF6BF6WH68 1400 aa24.66■■□□□ 1.54
HMGB2-203ENST00000446922 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.54
HMGB2-203ENST00000446922 INO80Q9ULG1 1556 aaPredicted RBP24.64■■□□□ 1.54
HMGB2-203ENST00000446922 SETD1BQ9UPS6 1966 aaKnown RBP24.63■■□□□ 1.53
HMGB2-203ENST00000446922 CEBPAP49715 358 aaPredicted RBP24.63■■□□□ 1.53
HMGB2-203ENST00000446922 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
HMGB2-203ENST00000446922 A2MP01023 1474 aa24.62■■□□□ 1.53
HMGB2-203ENST00000446922 LRRC9Q6ZRR7 1453 aa24.62■■□□□ 1.53
HMGB2-203ENST00000446922 PREX1Q8TCU6 1659 aa24.59■■□□□ 1.53
HMGB2-203ENST00000446922 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
HMGB2-203ENST00000446922 HSPA2P54652 639 aa24.58■■□□□ 1.53
HMGB2-203ENST00000446922 ILDR1Q86SU0 546 aaPredicted RBP24.58■■□□□ 1.53
HMGB2-203ENST00000446922 ADGBQ8N7X0 1667 aa24.56■■□□□ 1.52
HMGB2-203ENST00000446922 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
HMGB2-203ENST00000446922 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
HMGB2-203ENST00000446922 C3P01024 1663 aa24.55■■□□□ 1.52
HMGB2-203ENST00000446922 MROH2AA6NES4 1674 aa24.54■■□□□ 1.52
HMGB2-203ENST00000446922 CAMSAP2Q08AD1 1489 aa24.54■■□□□ 1.52
HMGB2-203ENST00000446922 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
HMGB2-203ENST00000446922 ZMYM3Q14202 1370 aa24.52■■□□□ 1.52
HMGB2-203ENST00000446922 NPATQ14207 1427 aa24.52■■□□□ 1.52
HMGB2-203ENST00000446922 ARHGEF5Q12774 1597 aa24.51■■□□□ 1.51
HMGB2-203ENST00000446922 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
HMGB2-203ENST00000446922 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
HMGB2-203ENST00000446922 DMRT2Q9Y5R5 561 aa24.51■■□□□ 1.51
HMGB2-203ENST00000446922 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
HMGB2-203ENST00000446922 MIA2Q96PC5 1412 aa24.5■■□□□ 1.51
HMGB2-203ENST00000446922 APLP2Q06481 763 aa24.49■■□□□ 1.51
HMGB2-203ENST00000446922 GGT6Q6P531 493 aa24.48■■□□□ 1.51
HMGB2-203ENST00000446922 MYOM3Q5VTT5 1437 aa24.45■■□□□ 1.51
HMGB2-203ENST00000446922 FBXO41Q8TF61 875 aa24.45■■□□□ 1.5
HMGB2-203ENST00000446922 FAM135AQ9P2D6 1515 aa24.42■■□□□ 1.5
HMGB2-203ENST00000446922 KIF3BO15066 747 aa24.4■■□□□ 1.5
HMGB2-203ENST00000446922 CLTCQ00610 1675 aaKnown RBP24.4■■□□□ 1.5
HMGB2-203ENST00000446922 MAST1Q9Y2H9 1570 aa24.38■■□□□ 1.49
HMGB2-203ENST00000446922 PTPRKQ15262 1439 aa24.37■■□□□ 1.49
HMGB2-203ENST00000446922 STRCQ7RTU9 1775 aa24.37■■□□□ 1.49
HMGB2-203ENST00000446922 PTPRTO14522 1441 aa24.35■■□□□ 1.49
HMGB2-203ENST00000446922 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
HMGB2-203ENST00000446922 CERKQ8TCT0 537 aa24.31■■□□□ 1.48
HMGB2-203ENST00000446922 WASHC2CQ9Y4E1 1318 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms