RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
LINC00440-201ENST00000446579 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
LINC00440-201ENST00000446579 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
LINC00440-201ENST00000446579 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
LINC00440-201ENST00000446579 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
LINC00440-201ENST00000446579 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
LINC00440-201ENST00000446579 ERBB3P21860 1342 aa11.88□□□□□ -0.51
LINC00440-201ENST00000446579 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
LINC00440-201ENST00000446579 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
LINC00440-201ENST00000446579 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
LINC00440-201ENST00000446579 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
LINC00440-201ENST00000446579 KRTAP3-2Q9BYR7 98 aa11.82□□□□□ -0.52
LINC00440-201ENST00000446579 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
LINC00440-201ENST00000446579 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
LINC00440-201ENST00000446579 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
LINC00440-201ENST00000446579 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
LINC00440-201ENST00000446579 C2orf72A6NCS6 295 aa11.76□□□□□ -0.53
LINC00440-201ENST00000446579 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
LINC00440-201ENST00000446579 PPP1R37O75864 691 aa11.72□□□□□ -0.53
LINC00440-201ENST00000446579 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00440-201ENST00000446579 KIF3CO14782 793 aa11.7□□□□□ -0.54
LINC00440-201ENST00000446579 CHGAP10645 457 aaKnown RBP11.7□□□□□ -0.54
LINC00440-201ENST00000446579 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
LINC00440-201ENST00000446579 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
LINC00440-201ENST00000446579 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
LINC00440-201ENST00000446579 NUDT7P0C024 238 aa11.64□□□□□ -0.55
LINC00440-201ENST00000446579 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
LINC00440-201ENST00000446579 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
LINC00440-201ENST00000446579 ANKRD13DQ6ZTN6 518 aa11.58□□□□□ -0.56
LINC00440-201ENST00000446579 SLC34A2O95436 690 aa11.57□□□□□ -0.56
LINC00440-201ENST00000446579 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
LINC00440-201ENST00000446579 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
LINC00440-201ENST00000446579 PLPP6Q8IY26 295 aa11.54□□□□□ -0.56
LINC00440-201ENST00000446579 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
LINC00440-201ENST00000446579 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
LINC00440-201ENST00000446579 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
LINC00440-201ENST00000446579 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
LINC00440-201ENST00000446579 FOXK1P85037 733 aa11.51□□□□□ -0.57
LINC00440-201ENST00000446579 RYDENQ9NUL5 291 aaKnown RBP11.51□□□□□ -0.57
LINC00440-201ENST00000446579 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00440-201ENST00000446579 DSG2Q14126 1118 aa11.49□□□□□ -0.57
LINC00440-201ENST00000446579 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
LINC00440-201ENST00000446579 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
LINC00440-201ENST00000446579 PBX2P40425 430 aa11.46□□□□□ -0.57
LINC00440-201ENST00000446579 PTGER2P43116 358 aa11.46□□□□□ -0.57
LINC00440-201ENST00000446579 TBC1D12O60347 775 aa11.45□□□□□ -0.58
LINC00440-201ENST00000446579 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
LINC00440-201ENST00000446579 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
LINC00440-201ENST00000446579 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
LINC00440-201ENST00000446579 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00440-201ENST00000446579 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
LINC00440-201ENST00000446579 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
LINC00440-201ENST00000446579 PPP4R3BQ5MIZ7 849 aa11.37□□□□□ -0.59
LINC00440-201ENST00000446579 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
LINC00440-201ENST00000446579 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
LINC00440-201ENST00000446579 PDE4AP27815 886 aa11.36□□□□□ -0.59
LINC00440-201ENST00000446579 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
LINC00440-201ENST00000446579 PSEN2P49810 448 aa11.34□□□□□ -0.59
LINC00440-201ENST00000446579 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
LINC00440-201ENST00000446579 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
LINC00440-201ENST00000446579 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
LINC00440-201ENST00000446579 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
LINC00440-201ENST00000446579 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
LINC00440-201ENST00000446579 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
LINC00440-201ENST00000446579 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
LINC00440-201ENST00000446579 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
LINC00440-201ENST00000446579 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
LINC00440-201ENST00000446579 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
LINC00440-201ENST00000446579 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
LINC00440-201ENST00000446579 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
LINC00440-201ENST00000446579 TK2O00142 265 aa11.25□□□□□ -0.61
LINC00440-201ENST00000446579 EVI5O60447 810 aa11.22□□□□□ -0.61
LINC00440-201ENST00000446579 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
LINC00440-201ENST00000446579 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
LINC00440-201ENST00000446579 HRO43593 1189 aa11.2□□□□□ -0.62
LINC00440-201ENST00000446579 FOSBP53539 338 aa11.19□□□□□ -0.62
LINC00440-201ENST00000446579 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
LINC00440-201ENST00000446579 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
LINC00440-201ENST00000446579 PTPREP23469 700 aa11.18□□□□□ -0.62
LINC00440-201ENST00000446579 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
LINC00440-201ENST00000446579 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
LINC00440-201ENST00000446579 MFSD10Q14728 455 aa11.17□□□□□ -0.62
LINC00440-201ENST00000446579 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
LINC00440-201ENST00000446579 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
LINC00440-201ENST00000446579 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
LINC00440-201ENST00000446579 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
LINC00440-201ENST00000446579 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
LINC00440-201ENST00000446579 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
LINC00440-201ENST00000446579 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
LINC00440-201ENST00000446579 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
LINC00440-201ENST00000446579 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
LINC00440-201ENST00000446579 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
LINC00440-201ENST00000446579 PTPN5P54829 565 aa11.09□□□□□ -0.63
LINC00440-201ENST00000446579 SLC4A5Q9BY07 1137 aa11.08□□□□□ -0.64
LINC00440-201ENST00000446579 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
LINC00440-201ENST00000446579 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
LINC00440-201ENST00000446579 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
LINC00440-201ENST00000446579 DPYSL4O14531 572 aa11.04□□□□□ -0.64
LINC00440-201ENST00000446579 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
LINC00440-201ENST00000446579 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms