RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.52
CDCA3-203ENST00000446553 ADAMTSL3P82987 1691 aa18.27■□□□□ 0.52
CDCA3-203ENST00000446553 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
CDCA3-203ENST00000446553 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
CDCA3-203ENST00000446553 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
CDCA3-203ENST00000446553 ZNF518AQ6AHZ1 1483 aa18.21■□□□□ 0.51
CDCA3-203ENST00000446553 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
CDCA3-203ENST00000446553 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
CDCA3-203ENST00000446553 KDM5CP41229 1560 aa18.19■□□□□ 0.5
CDCA3-203ENST00000446553 YEATS2Q9ULM3 1422 aa18.19■□□□□ 0.5
CDCA3-203ENST00000446553 PTPRMP28827 1452 aa18.19■□□□□ 0.5
CDCA3-203ENST00000446553 ARID4BQ4LE39 1312 aaPredicted RBP18.18■□□□□ 0.5
CDCA3-203ENST00000446553 CEP162Q5TB80 1403 aa18.17■□□□□ 0.5
CDCA3-203ENST00000446553 ATP10AO60312 1499 aa18.16■□□□□ 0.5
CDCA3-203ENST00000446553 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
CDCA3-203ENST00000446553 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
CDCA3-203ENST00000446553 MADDQ8WXG6 1647 aa18.14■□□□□ 0.49
CDCA3-203ENST00000446553 C9orf84Q5VXU9 1444 aa18.14■□□□□ 0.49
CDCA3-203ENST00000446553 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.49
CDCA3-203ENST00000446553 ABCC1P33527 1531 aa18.13■□□□□ 0.49
CDCA3-203ENST00000446553 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
CDCA3-203ENST00000446553 GPATCH8Q9UKJ3 1502 aaKnown RBP18.11■□□□□ 0.49
CDCA3-203ENST00000446553 REREQ9P2R6 1566 aa18.11■□□□□ 0.49
CDCA3-203ENST00000446553 SIGLEC1Q9BZZ2 1709 aa18.11■□□□□ 0.49
CDCA3-203ENST00000446553 ITSN2Q9NZM3 1697 aa18.1■□□□□ 0.49
CDCA3-203ENST00000446553 MTUS2Q5JR59 1369 aa18.1■□□□□ 0.49
CDCA3-203ENST00000446553 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
CDCA3-203ENST00000446553 PLEKHH2Q8IVE3 1493 aa18.07■□□□□ 0.48
CDCA3-203ENST00000446553 KIAA1107Q9UPP5 1409 aa18.07■□□□□ 0.48
CDCA3-203ENST00000446553 TRAPPC8Q9Y2L5 1435 aa18.07■□□□□ 0.48
CDCA3-203ENST00000446553 RIMS1Q86UR5 1692 aaKnown RBP18.07■□□□□ 0.48
CDCA3-203ENST00000446553 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
CDCA3-203ENST00000446553 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
CDCA3-203ENST00000446553 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
CDCA3-203ENST00000446553 SAMD9LQ8IVG5 1584 aa18.05■□□□□ 0.48
CDCA3-203ENST00000446553 AGLP35573 1532 aa18.04■□□□□ 0.48
CDCA3-203ENST00000446553 FER1L4A9Z1Z3 1794 aa18.04■□□□□ 0.48
CDCA3-203ENST00000446553 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
CDCA3-203ENST00000446553 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
CDCA3-203ENST00000446553 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
CDCA3-203ENST00000446553 SYCP2Q9BX26 1530 aa18.01■□□□□ 0.47
CDCA3-203ENST00000446553 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
CDCA3-203ENST00000446553 TIAM1Q13009 1591 aa18■□□□□ 0.47
CDCA3-203ENST00000446553 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
CDCA3-203ENST00000446553 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
CDCA3-203ENST00000446553 LMTK3Q96Q04 1460 aa17.99■□□□□ 0.47
CDCA3-203ENST00000446553 LOC105371045A0A1W2PR82 267 aa17.98■□□□□ 0.47
CDCA3-203ENST00000446553 MLECQ14165 292 aa17.98■□□□□ 0.47
CDCA3-203ENST00000446553 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
CDCA3-203ENST00000446553 HNRNPMP52272 730 aaKnown RBP eCLIP17.96■□□□□ 0.47
CDCA3-203ENST00000446553 MAP3K1Q13233 1512 aa17.96■□□□□ 0.47
CDCA3-203ENST00000446553 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
CDCA3-203ENST00000446553 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
CDCA3-203ENST00000446553 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
CDCA3-203ENST00000446553 ATP7AQ04656 1500 aa17.94■□□□□ 0.46
CDCA3-203ENST00000446553 NCOA2Q15596 1464 aa17.94■□□□□ 0.46
CDCA3-203ENST00000446553 MBD5Q9P267 1494 aa17.93■□□□□ 0.46
CDCA3-203ENST00000446553 RTEL1-TNFRSF6BF6WH68 1400 aa17.91■□□□□ 0.46
CDCA3-203ENST00000446553 CNTLNQ9NXG0 1405 aa17.91■□□□□ 0.46
CDCA3-203ENST00000446553 RSPH4AQ5TD94 716 aa17.91■□□□□ 0.46
CDCA3-203ENST00000446553 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
CDCA3-203ENST00000446553 PLXNC1O60486 1568 aa17.9■□□□□ 0.46
CDCA3-203ENST00000446553 PREX1Q8TCU6 1659 aa17.88■□□□□ 0.45
CDCA3-203ENST00000446553 ZNF644Q9H582 1327 aaPredicted RBP17.88■□□□□ 0.45
CDCA3-203ENST00000446553 A2MP01023 1474 aa17.88■□□□□ 0.45
CDCA3-203ENST00000446553 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
CDCA3-203ENST00000446553 ESF1Q9H501 851 aaKnown RBP17.86■□□□□ 0.45
CDCA3-203ENST00000446553 MROH2AA6NES4 1674 aa17.85■□□□□ 0.45
CDCA3-203ENST00000446553 CAMSAP2Q08AD1 1489 aa17.85■□□□□ 0.45
CDCA3-203ENST00000446553 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
CDCA3-203ENST00000446553 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
CDCA3-203ENST00000446553 C3P01024 1663 aa17.84■□□□□ 0.45
CDCA3-203ENST00000446553 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
CDCA3-203ENST00000446553 ARHGEF5Q12774 1597 aa17.83■□□□□ 0.45
CDCA3-203ENST00000446553 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
CDCA3-203ENST00000446553 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
CDCA3-203ENST00000446553 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
CDCA3-203ENST00000446553 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
CDCA3-203ENST00000446553 NPATQ14207 1427 aa17.81■□□□□ 0.44
CDCA3-203ENST00000446553 HSPA2P54652 639 aa17.8■□□□□ 0.44
CDCA3-203ENST00000446553 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
CDCA3-203ENST00000446553 MYOM3Q5VTT5 1437 aa17.78■□□□□ 0.44
CDCA3-203ENST00000446553 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
CDCA3-203ENST00000446553 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.44
CDCA3-203ENST00000446553 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.44
CDCA3-203ENST00000446553 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
CDCA3-203ENST00000446553 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
CDCA3-203ENST00000446553 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
CDCA3-203ENST00000446553 APLP2Q06481 763 aa17.74■□□□□ 0.43
CDCA3-203ENST00000446553 GGT6Q6P531 493 aa17.73■□□□□ 0.43
CDCA3-203ENST00000446553 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
CDCA3-203ENST00000446553 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
CDCA3-203ENST00000446553 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
CDCA3-203ENST00000446553 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
CDCA3-203ENST00000446553 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
CDCA3-203ENST00000446553 KIF3BO15066 747 aa17.68■□□□□ 0.42
CDCA3-203ENST00000446553 PTPRTO14522 1441 aa17.67■□□□□ 0.42
CDCA3-203ENST00000446553 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
CDCA3-203ENST00000446553 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
CDCA3-203ENST00000446553 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms