RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SOGA1O94964 1423 aa9.98□□□□□ -0.81
SMG1-202ENST00000446231 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.81
SMG1-202ENST00000446231 MRE11P49959 708 aa9.96□□□□□ -0.82
SMG1-202ENST00000446231 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
SMG1-202ENST00000446231 ZBTB7CA1YPR0 619 aa9.95□□□□□ -0.82
SMG1-202ENST00000446231 MTUS2Q5JR59 1369 aa9.95□□□□□ -0.82
SMG1-202ENST00000446231 CDCA8Q53HL2 280 aa9.95□□□□□ -0.82
SMG1-202ENST00000446231 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
SMG1-202ENST00000446231 PLIN1O60240 522 aa9.94□□□□□ -0.82
SMG1-202ENST00000446231 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
SMG1-202ENST00000446231 MTERF4Q7Z6M4 381 aaKnown RBP9.94□□□□□ -0.82
SMG1-202ENST00000446231 BAZ1BQ9UIG0 1483 aaKnown RBP9.93□□□□□ -0.82
SMG1-202ENST00000446231 PRKRIP1Q9H875 184 aaPredicted RBP9.93□□□□□ -0.82
SMG1-202ENST00000446231 BACH2Q9BYV9 841 aa9.93□□□□□ -0.82
SMG1-202ENST00000446231 MFAP1P55081 439 aaKnown RBP9.92□□□□□ -0.82
SMG1-202ENST00000446231 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
SMG1-202ENST00000446231 CHMP4BQ9H444 224 aaKnown RBP9.92□□□□□ -0.82
SMG1-202ENST00000446231 CALD1Q05682 793 aaKnown RBP9.92□□□□□ -0.82
SMG1-202ENST00000446231 GOLGA6L6A8MZA4 724 aa9.92□□□□□ -0.82
SMG1-202ENST00000446231 KTN1Q86UP2 1357 aaKnown RBP9.91□□□□□ -0.82
SMG1-202ENST00000446231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.91□□□□□ -0.823e-7■□□□□ 10.9
SMG1-202ENST00000446231 FOXD1Q16676 465 aa9.91□□□□□ -0.82
SMG1-202ENST00000446231 SYAP1Q96A49 352 aaPredicted RBP9.91□□□□□ -0.82
SMG1-202ENST00000446231 NASPP49321 788 aaPredicted RBP9.9□□□□□ -0.82
SMG1-202ENST00000446231 L3MBTL2Q969R5 705 aa9.9□□□□□ -0.82
SMG1-202ENST00000446231 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
SMG1-202ENST00000446231 CFAP53Q96M91 514 aa9.9□□□□□ -0.82
SMG1-202ENST00000446231 MAPK8IP3Q9UPT6 1336 aa9.9□□□□□ -0.83
SMG1-202ENST00000446231 MPHOSPH9Q99550 1183 aa9.89□□□□□ -0.83
SMG1-202ENST00000446231 NRDCO43847 1150 aa9.89□□□□□ -0.83
SMG1-202ENST00000446231 CHMP5Q9NZZ3 219 aa9.89□□□□□ -0.83
SMG1-202ENST00000446231 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
SMG1-202ENST00000446231 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
SMG1-202ENST00000446231 FOXD4L1Q9NU39 408 aa9.89□□□□□ -0.83
SMG1-202ENST00000446231 C11orf95C9JLR9 678 aaPredicted RBP9.88□□□□□ -0.83
SMG1-202ENST00000446231 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
SMG1-202ENST00000446231 PHF14O94880 888 aa9.88□□□□□ -0.83
SMG1-202ENST00000446231 R3HCC1Q9Y3T6 440 aaKnown RBP9.88□□□□□ -0.83
SMG1-202ENST00000446231 TRAK2O60296 914 aa9.88□□□□□ -0.83
SMG1-202ENST00000446231 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
SMG1-202ENST00000446231 ZRSR1Q15695 479 aaKnown RBP9.87□□□□□ -0.83
SMG1-202ENST00000446231 PMFBP1Q8TBY8 1022 aa9.87□□□□□ -0.83
SMG1-202ENST00000446231 TSPY4P0CV99 314 aa9.86□□□□□ -0.83
SMG1-202ENST00000446231 TSPY10P0CW01 314 aa9.86□□□□□ -0.83
SMG1-202ENST00000446231 ESPNB1AK53 854 aa9.86□□□□□ -0.83
SMG1-202ENST00000446231 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
SMG1-202ENST00000446231 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
SMG1-202ENST00000446231 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
SMG1-202ENST00000446231 GOLGA2Q08379 1002 aa9.85□□□□□ -0.83
SMG1-202ENST00000446231 ISY1Q9ULR0 285 aaKnown RBP9.84□□□□□ -0.83
SMG1-202ENST00000446231 ITPRIPQ8IWB1 547 aa9.84□□□□□ -0.83
SMG1-202ENST00000446231 CFAP44Q96MT7 982 aa9.83□□□□□ -0.84
SMG1-202ENST00000446231 POGKQ9P215 609 aa9.83□□□□□ -0.84
SMG1-202ENST00000446231 CCDC39Q9UFE4 941 aa9.83□□□□□ -0.84
SMG1-202ENST00000446231 DDX49Q9Y6V7 483 aaKnown RBP9.82□□□□□ -0.84
SMG1-202ENST00000446231 MCCP23508 829 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 KIAA1211Q6ZU35 1233 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 CENPJQ9HC77 1338 aaPredicted RBP9.82□□□□□ -0.84
SMG1-202ENST00000446231 MCM4P33991 863 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
SMG1-202ENST00000446231 TMF1P82094 1093 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 DCAF11Q8TEB1 546 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 ROCK2O75116 1388 aaKnown RBP9.82□□□□□ -0.84
SMG1-202ENST00000446231 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
SMG1-202ENST00000446231 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
SMG1-202ENST00000446231 CCDC173Q0VFZ6 552 aa9.81□□□□□ -0.84
SMG1-202ENST00000446231 C22orf23Q9BZE7 217 aa9.8□□□□□ -0.84
SMG1-202ENST00000446231 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
SMG1-202ENST00000446231 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
SMG1-202ENST00000446231 KIF15Q9NS87 1388 aa9.8□□□□□ -0.84
SMG1-202ENST00000446231 TAF3Q5VWG9 929 aa9.8□□□□□ -0.84
SMG1-202ENST00000446231 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
SMG1-202ENST00000446231 PDCL3Q9H2J4 239 aa9.8□□□□□ -0.84
SMG1-202ENST00000446231 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
SMG1-202ENST00000446231 GRPEL1Q9HAV7 217 aa9.79□□□□□ -0.84
SMG1-202ENST00000446231 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
SMG1-202ENST00000446231 MORC1Q86VD1 984 aa9.78□□□□□ -0.84
SMG1-202ENST00000446231 CCDC146Q8IYE0 955 aa9.78□□□□□ -0.84
SMG1-202ENST00000446231 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
SMG1-202ENST00000446231 CGNL1Q0VF96 1302 aa9.77□□□□□ -0.84
SMG1-202ENST00000446231 PDE4CQ08493 712 aa9.77□□□□□ -0.84
SMG1-202ENST00000446231 CCDC88BA6NC98 1476 aa9.77□□□□□ -0.85
SMG1-202ENST00000446231 PKD2Q13563 968 aa9.77□□□□□ -0.85
SMG1-202ENST00000446231 PANK3Q9H999 370 aa9.76□□□□□ -0.85
SMG1-202ENST00000446231 PNISRQ8TF01 805 aaKnown RBP9.76□□□□□ -0.85
SMG1-202ENST00000446231 CFDP1Q9UEE9 299 aaPredicted RBP9.76□□□□□ -0.85
SMG1-202ENST00000446231 UQCRHLA0A096LP55 91 aa9.76□□□□□ -0.85
SMG1-202ENST00000446231 UQCRHP07919 91 aa9.76□□□□□ -0.85
SMG1-202ENST00000446231 PHLDB1Q86UU1 1377 aa9.76□□□□□ -0.85
SMG1-202ENST00000446231 ST18O60284 1047 aa9.76□□□□□ -0.85
SMG1-202ENST00000446231 E9PSI1 815 aa9.76□□□□□ -0.85
SMG1-202ENST00000446231 CCDC7Q96M83 1385 aa9.75□□□□□ -0.85
SMG1-202ENST00000446231 COG6Q9Y2V7 657 aa9.74□□□□□ -0.85
SMG1-202ENST00000446231 FBLN2P98095 1184 aa9.74□□□□□ -0.85
SMG1-202ENST00000446231 KIF16BQ96L93 1317 aa9.74□□□□□ -0.85
SMG1-202ENST00000446231 AAMPQ13685 434 aa9.74□□□□□ -0.85
SMG1-202ENST00000446231 NUCB2P80303 420 aa9.74□□□□□ -0.85
SMG1-202ENST00000446231 TEX35Q5T0J7 233 aa9.74□□□□□ -0.85
SMG1-202ENST00000446231 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms