RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
FXR1-203ENST00000445140 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
FXR1-203ENST00000445140 KANK4Q5T7N3 995 aaPredicted RBP13.65□□□□□ -0.22
FXR1-203ENST00000445140 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
FXR1-203ENST00000445140 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
FXR1-203ENST00000445140 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
FXR1-203ENST00000445140 ABCC1P33527 1531 aa13.64□□□□□ -0.23
FXR1-203ENST00000445140 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
FXR1-203ENST00000445140 SAMD9LQ8IVG5 1584 aa13.64□□□□□ -0.23
FXR1-203ENST00000445140 MAST1Q9Y2H9 1570 aa13.63□□□□□ -0.23
FXR1-203ENST00000445140 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
FXR1-203ENST00000445140 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
FXR1-203ENST00000445140 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
FXR1-203ENST00000445140 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
FXR1-203ENST00000445140 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
FXR1-203ENST00000445140 CD109Q6YHK3 1445 aa13.6□□□□□ -0.23
FXR1-203ENST00000445140 KDM5CP41229 1560 aa13.59□□□□□ -0.23
FXR1-203ENST00000445140 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
FXR1-203ENST00000445140 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
FXR1-203ENST00000445140 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.23
FXR1-203ENST00000445140 RICTORQ6R327 1708 aa13.58□□□□□ -0.24
FXR1-203ENST00000445140 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
FXR1-203ENST00000445140 FANCAO15360 1455 aa13.58□□□□□ -0.24
FXR1-203ENST00000445140 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
FXR1-203ENST00000445140 AKNAQ7Z591 1439 aa13.56□□□□□ -0.24
FXR1-203ENST00000445140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
FXR1-203ENST00000445140 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
FXR1-203ENST00000445140 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
FXR1-203ENST00000445140 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
FXR1-203ENST00000445140 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
FXR1-203ENST00000445140 ADGRL2O95490 1459 aa13.54□□□□□ -0.24
FXR1-203ENST00000445140 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
FXR1-203ENST00000445140 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
FXR1-203ENST00000445140 BCORL1Q5H9F3 1711 aa13.52□□□□□ -0.24
FXR1-203ENST00000445140 REREQ9P2R6 1566 aa13.52□□□□□ -0.24
FXR1-203ENST00000445140 CCDC141Q6ZP82 1450 aa13.52□□□□□ -0.24
FXR1-203ENST00000445140 RTEL1-TNFRSF6BF6WH68 1400 aa13.52□□□□□ -0.25
FXR1-203ENST00000445140 EFCAB2Q5VUJ9 269 aa13.52□□□□□ -0.25
FXR1-203ENST00000445140 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
FXR1-203ENST00000445140 SYCP2Q9BX26 1530 aa13.51□□□□□ -0.25
FXR1-203ENST00000445140 MAGI2Q86UL8 1455 aa13.51□□□□□ -0.25
FXR1-203ENST00000445140 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
FXR1-203ENST00000445140 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
FXR1-203ENST00000445140 ZNF518AQ6AHZ1 1483 aa13.51□□□□□ -0.25
FXR1-203ENST00000445140 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
FXR1-203ENST00000445140 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
FXR1-203ENST00000445140 TSPOAP1O95153 1857 aa13.5□□□□□ -0.25
FXR1-203ENST00000445140 MLH3Q9UHC1 1453 aa13.49□□□□□ -0.25
FXR1-203ENST00000445140 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
FXR1-203ENST00000445140 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
FXR1-203ENST00000445140 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
FXR1-203ENST00000445140 DAPK1P53355 1430 aa13.48□□□□□ -0.25
FXR1-203ENST00000445140 ROCK1Q13464 1354 aa13.48□□□□□ -0.25
FXR1-203ENST00000445140 CFDP1Q9UEE9 299 aaPredicted RBP13.48□□□□□ -0.25
FXR1-203ENST00000445140 DENND4BO75064 1496 aaPredicted RBP13.47□□□□□ -0.25
FXR1-203ENST00000445140 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.25
FXR1-203ENST00000445140 KCNH8Q96L42 1107 aa13.46□□□□□ -0.25
FXR1-203ENST00000445140 ABCC5O15440 1437 aa13.46□□□□□ -0.25
FXR1-203ENST00000445140 KIDINS220Q9ULH0 1771 aa13.46□□□□□ -0.25
FXR1-203ENST00000445140 ARHGEF40Q8TER5 1519 aa13.45□□□□□ -0.26
FXR1-203ENST00000445140 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
FXR1-203ENST00000445140 KDM6BO15054 1643 aa13.43□□□□□ -0.26
FXR1-203ENST00000445140 FAM135AQ9P2D6 1515 aa13.43□□□□□ -0.26
FXR1-203ENST00000445140 SCAPERQ9BY12 1400 aa13.43□□□□□ -0.26
FXR1-203ENST00000445140 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
FXR1-203ENST00000445140 TRAPPC8Q9Y2L5 1435 aa13.41□□□□□ -0.26
FXR1-203ENST00000445140 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
FXR1-203ENST00000445140 C9orf84Q5VXU9 1444 aa13.41□□□□□ -0.26
FXR1-203ENST00000445140 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
FXR1-203ENST00000445140 AGLP35573 1532 aa13.4□□□□□ -0.26
FXR1-203ENST00000445140 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
FXR1-203ENST00000445140 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
FXR1-203ENST00000445140 HFM1A2PYH4 1435 aa13.4□□□□□ -0.27
FXR1-203ENST00000445140 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
FXR1-203ENST00000445140 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
FXR1-203ENST00000445140 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
FXR1-203ENST00000445140 NCOA1Q15788 1441 aa13.37□□□□□ -0.27
FXR1-203ENST00000445140 ERBINQ96RT1 1412 aa13.37□□□□□ -0.27
FXR1-203ENST00000445140 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
FXR1-203ENST00000445140 UNC13BO14795 1591 aa13.37□□□□□ -0.27
FXR1-203ENST00000445140 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
FXR1-203ENST00000445140 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
FXR1-203ENST00000445140 HRCP23327 699 aa13.35□□□□□ -0.27
FXR1-203ENST00000445140 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
FXR1-203ENST00000445140 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
FXR1-203ENST00000445140 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
FXR1-203ENST00000445140 NAIPQ13075 1403 aa13.32□□□□□ -0.28
FXR1-203ENST00000445140 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
FXR1-203ENST00000445140 ATP10AO60312 1499 aa13.32□□□□□ -0.28
FXR1-203ENST00000445140 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
FXR1-203ENST00000445140 A2MP01023 1474 aa13.3□□□□□ -0.28
FXR1-203ENST00000445140 MROH1Q8NDA8 1641 aa13.3□□□□□ -0.28
FXR1-203ENST00000445140 SPAG9O60271 1321 aaKnown RBP13.3□□□□□ -0.28
FXR1-203ENST00000445140 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.286e-6■■■■□ 20.3
FXR1-203ENST00000445140 IQGAP3Q86VI3 1631 aa13.29□□□□□ -0.28
FXR1-203ENST00000445140 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
FXR1-203ENST00000445140 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
FXR1-203ENST00000445140 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
FXR1-203ENST00000445140 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
FXR1-203ENST00000445140 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms