RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 POGZQ7Z3K3 1410 aa27.9■■■□□ 2.06
PDCD4-203ENST00000444997 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
PDCD4-203ENST00000444997 ZMYM4Q5VZL5 1548 aa27.88■■■□□ 2.05
PDCD4-203ENST00000444997 ARHGEF40Q8TER5 1519 aa27.88■■■□□ 2.05
PDCD4-203ENST00000444997 ZFYVE16Q7Z3T8 1539 aa27.86■■■□□ 2.05
PDCD4-203ENST00000444997 YEATS2Q9ULM3 1422 aa27.82■■■□□ 2.04
PDCD4-203ENST00000444997 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
PDCD4-203ENST00000444997 MYT1LQ9UL68 1186 aa27.8■■■□□ 2.04
PDCD4-203ENST00000444997 ZNF518AQ6AHZ1 1483 aa27.8■■■□□ 2.04
PDCD4-203ENST00000444997 MTUS2Q5JR59 1369 aa27.79■■■□□ 2.04
PDCD4-203ENST00000444997 AFAP1Q8N556 730 aa27.78■■■□□ 2.04
PDCD4-203ENST00000444997 ADAMTSL3P82987 1691 aa27.77■■■□□ 2.04
PDCD4-203ENST00000444997 PREX2Q70Z35 1606 aa27.77■■■□□ 2.04
PDCD4-203ENST00000444997 BCORL1Q5H9F3 1711 aa27.76■■■□□ 2.03
PDCD4-203ENST00000444997 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
PDCD4-203ENST00000444997 ZNF777Q9ULD5 760 aaPredicted RBP27.74■■■□□ 2.03
PDCD4-203ENST00000444997 ATP10AO60312 1499 aa27.74■■■□□ 2.03
PDCD4-203ENST00000444997 PTPRMP28827 1452 aa27.74■■■□□ 2.03
PDCD4-203ENST00000444997 CCNB3Q8WWL7 1395 aa27.72■■■□□ 2.03
PDCD4-203ENST00000444997 C9orf84Q5VXU9 1444 aa27.7■■■□□ 2.03
PDCD4-203ENST00000444997 GPATCH8Q9UKJ3 1502 aaKnown RBP27.69■■■□□ 2.02
PDCD4-203ENST00000444997 MLECQ14165 292 aa27.69■■■□□ 2.02
PDCD4-203ENST00000444997 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
PDCD4-203ENST00000444997 KDM5CP41229 1560 aa27.69■■■□□ 2.02
PDCD4-203ENST00000444997 ABCC1P33527 1531 aa27.68■■■□□ 2.02
PDCD4-203ENST00000444997 CDC42BPAQ5VT25 1732 aa27.68■■■□□ 2.02
PDCD4-203ENST00000444997 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
PDCD4-203ENST00000444997 TRAPPC8Q9Y2L5 1435 aa27.66■■■□□ 2.02
PDCD4-203ENST00000444997 HECW2Q9P2P5 1572 aa27.65■■■□□ 2.02
PDCD4-203ENST00000444997 ARHGEF12Q9NZN5 1544 aa27.65■■■□□ 2.02
PDCD4-203ENST00000444997 MLH3Q9UHC1 1453 aa27.64■■■□□ 2.02
PDCD4-203ENST00000444997 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
PDCD4-203ENST00000444997 ITSN2Q9NZM3 1697 aa27.61■■■□□ 2.01
PDCD4-203ENST00000444997 PLEKHH2Q8IVE3 1493 aa27.6■■■□□ 2.01
PDCD4-203ENST00000444997 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
PDCD4-203ENST00000444997 VPS8Q8N3P4 1428 aa27.59■■■□□ 2.01
PDCD4-203ENST00000444997 RIMS1Q86UR5 1692 aaKnown RBP27.59■■■□□ 2.01
PDCD4-203ENST00000444997 SIGLEC1Q9BZZ2 1709 aa27.58■■■□□ 2.01
PDCD4-203ENST00000444997 SAMD9LQ8IVG5 1584 aa27.58■■■□□ 2.01
PDCD4-203ENST00000444997 PLPPR3Q6T4P5 718 aa27.57■■■□□ 2
PDCD4-203ENST00000444997 KIAA1107Q9UPP5 1409 aa27.57■■■□□ 2
PDCD4-203ENST00000444997 SYCP2Q9BX26 1530 aa27.56■■■□□ 2
PDCD4-203ENST00000444997 DIP2CQ9Y2E4 1556 aa27.56■■■□□ 2
PDCD4-203ENST00000444997 SPAG9O60271 1321 aaKnown RBP27.55■■■□□ 2
PDCD4-203ENST00000444997 TIAM1Q13009 1591 aa27.52■■■□□ 2
PDCD4-203ENST00000444997 REREQ9P2R6 1566 aa27.52■■■□□ 2
PDCD4-203ENST00000444997 ABCA6Q8N139 1617 aa27.51■■□□□ 1.99
PDCD4-203ENST00000444997 FER1L4A9Z1Z3 1794 aa27.48■■□□□ 1.99
PDCD4-203ENST00000444997 ESF1Q9H501 851 aaKnown RBP27.48■■□□□ 1.99
PDCD4-203ENST00000444997 ZNF644Q9H582 1327 aaPredicted RBP27.47■■□□□ 1.99
PDCD4-203ENST00000444997 NCOA2Q15596 1464 aa27.47■■□□□ 1.99
PDCD4-203ENST00000444997 SUPT6HQ7KZ85 1726 aaKnown RBP27.47■■□□□ 1.99
PDCD4-203ENST00000444997 KIDINS220Q9ULH0 1771 aa27.46■■□□□ 1.99
PDCD4-203ENST00000444997 AGLP35573 1532 aa27.46■■□□□ 1.99
PDCD4-203ENST00000444997 LRRC9Q6ZRR7 1453 aa27.43■■□□□ 1.98
PDCD4-203ENST00000444997 ATP7AQ04656 1500 aa27.41■■□□□ 1.98
PDCD4-203ENST00000444997 APLP2Q06481 763 aa27.41■■□□□ 1.98
PDCD4-203ENST00000444997 MAP3K1Q13233 1512 aa27.4■■□□□ 1.98
PDCD4-203ENST00000444997 LMTK3Q96Q04 1460 aa27.39■■□□□ 1.98
PDCD4-203ENST00000444997 CEBPAP49715 358 aaPredicted RBP27.38■■□□□ 1.97
PDCD4-203ENST00000444997 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
PDCD4-203ENST00000444997 MBD5Q9P267 1494 aa27.38■■□□□ 1.97
PDCD4-203ENST00000444997 KANK4Q5T7N3 995 aaPredicted RBP27.36■■□□□ 1.97
PDCD4-203ENST00000444997 INO80Q9ULG1 1556 aaPredicted RBP27.35■■□□□ 1.97
PDCD4-203ENST00000444997 A2MP01023 1474 aa27.34■■□□□ 1.97
PDCD4-203ENST00000444997 CAMSAP2Q08AD1 1489 aa27.33■■□□□ 1.97
PDCD4-203ENST00000444997 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.96
PDCD4-203ENST00000444997 CNTLNQ9NXG0 1405 aa27.32■■□□□ 1.96
PDCD4-203ENST00000444997 HSPA2P54652 639 aa27.31■■□□□ 1.96
PDCD4-203ENST00000444997 CCDC141Q6ZP82 1450 aa27.31■■□□□ 1.96
PDCD4-203ENST00000444997 TSPY4P0CV99 314 aa27.28■■□□□ 1.96
PDCD4-203ENST00000444997 TSPY10P0CW01 314 aa27.28■■□□□ 1.96
PDCD4-203ENST00000444997 GGT6Q6P531 493 aa27.26■■□□□ 1.95
PDCD4-203ENST00000444997 PLXNC1O60486 1568 aa27.26■■□□□ 1.95
PDCD4-203ENST00000444997 ADGBQ8N7X0 1667 aa27.24■■□□□ 1.95
PDCD4-203ENST00000444997 MYOM3Q5VTT5 1437 aa27.23■■□□□ 1.95
PDCD4-203ENST00000444997 UHRF1BP1Q6BDS2 1440 aa27.23■■□□□ 1.95
PDCD4-203ENST00000444997 MIA2Q96PC5 1412 aa27.23■■□□□ 1.95
PDCD4-203ENST00000444997 DHX29Q7Z478 1369 aaKnown RBP27.22■■□□□ 1.95
PDCD4-203ENST00000444997 PPP6R1Q9UPN7 881 aa27.22■■□□□ 1.95
PDCD4-203ENST00000444997 ARHGEF5Q12774 1597 aa27.21■■□□□ 1.95
PDCD4-203ENST00000444997 PREX1Q8TCU6 1659 aa27.21■■□□□ 1.95
PDCD4-203ENST00000444997 C3P01024 1663 aa27.2■■□□□ 1.94
PDCD4-203ENST00000444997 ZMYM3Q14202 1370 aa27.2■■□□□ 1.94
PDCD4-203ENST00000444997 KIF3BO15066 747 aa27.16■■□□□ 1.94
PDCD4-203ENST00000444997 SETD1BQ9UPS6 1966 aaKnown RBP27.14■■□□□ 1.94
PDCD4-203ENST00000444997 MROH2AA6NES4 1674 aa27.14■■□□□ 1.93
PDCD4-203ENST00000444997 ILDR1Q86SU0 546 aaPredicted RBP27.13■■□□□ 1.93
PDCD4-203ENST00000444997 NPATQ14207 1427 aa27.13■■□□□ 1.93
PDCD4-203ENST00000444997 CLTCQ00610 1675 aaKnown RBP27.09■■□□□ 1.93
PDCD4-203ENST00000444997 DMRT2Q9Y5R5 561 aa27.09■■□□□ 1.93
PDCD4-203ENST00000444997 MAST1Q9Y2H9 1570 aa27.05■■□□□ 1.92
PDCD4-203ENST00000444997 WASHC2CQ9Y4E1 1318 aa27.05■■□□□ 1.92
PDCD4-203ENST00000444997 PTPRKQ15262 1439 aa27.02■■□□□ 1.92
PDCD4-203ENST00000444997 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
PDCD4-203ENST00000444997 PTPN23Q9H3S7 1636 aa27.01■■□□□ 1.91
PDCD4-203ENST00000444997 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
PDCD4-203ENST00000444997 KDM5DQ9BY66 1539 aa26.99■■□□□ 1.91
PDCD4-203ENST00000444997 ABCC5O15440 1437 aa26.97■■□□□ 1.91
PDCD4-203ENST00000444997 TCOF1Q13428 1488 aaKnown RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms