RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
CCNE1-203ENST00000444983 CFDP1Q9UEE9 299 aaPredicted RBP23.22■■□□□ 1.31
CCNE1-203ENST00000444983 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
CCNE1-203ENST00000444983 ARHGAP5Q13017 1502 aa23.2■■□□□ 1.3
CCNE1-203ENST00000444983 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
CCNE1-203ENST00000444983 PPRC1Q5VV67 1664 aaKnown RBP23.19■■□□□ 1.3
CCNE1-203ENST00000444983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCNE1-203ENST00000444983 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
CCNE1-203ENST00000444983 FANCAO15360 1455 aa23.17■■□□□ 1.3
CCNE1-203ENST00000444983 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
CCNE1-203ENST00000444983 ZNF644Q9H582 1327 aaPredicted RBP23.15■■□□□ 1.3
CCNE1-203ENST00000444983 CAMSAP2Q08AD1 1489 aa23.14■■□□□ 1.3
CCNE1-203ENST00000444983 TSPOAP1O95153 1857 aa23.12■■□□□ 1.29
CCNE1-203ENST00000444983 NEO1Q92859 1461 aa23.12■■□□□ 1.29
CCNE1-203ENST00000444983 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
CCNE1-203ENST00000444983 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
CCNE1-203ENST00000444983 ZNF777Q9ULD5 760 aaPredicted RBP23.1■■□□□ 1.29
CCNE1-203ENST00000444983 KIAA1107Q9UPP5 1409 aa23.1■■□□□ 1.29
CCNE1-203ENST00000444983 ABCC1P33527 1531 aa23.1■■□□□ 1.29
CCNE1-203ENST00000444983 MBD5Q9P267 1494 aa23.1■■□□□ 1.29
CCNE1-203ENST00000444983 AKNAQ7Z591 1439 aa23.1■■□□□ 1.29
CCNE1-203ENST00000444983 TEX14Q8IWB6 1497 aa23.09■■□□□ 1.29
CCNE1-203ENST00000444983 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
CCNE1-203ENST00000444983 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.29
CCNE1-203ENST00000444983 PLEKHH2Q8IVE3 1493 aa23.08■■□□□ 1.29
CCNE1-203ENST00000444983 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
CCNE1-203ENST00000444983 ARHGEF5Q12774 1597 aa23.05■■□□□ 1.28
CCNE1-203ENST00000444983 SYCP2Q9BX26 1530 aa23.05■■□□□ 1.28
CCNE1-203ENST00000444983 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
CCNE1-203ENST00000444983 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
CCNE1-203ENST00000444983 HNRNPMP52272 730 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCNE1-203ENST00000444983 ABCC5O15440 1437 aa23.01■■□□□ 1.27
CCNE1-203ENST00000444983 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
CCNE1-203ENST00000444983 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
CCNE1-203ENST00000444983 DAPK1P53355 1430 aa23■■□□□ 1.27
CCNE1-203ENST00000444983 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
CCNE1-203ENST00000444983 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
CCNE1-203ENST00000444983 CCDC141Q6ZP82 1450 aa22.98■■□□□ 1.27
CCNE1-203ENST00000444983 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
CCNE1-203ENST00000444983 POGZQ7Z3K3 1410 aa22.95■■□□□ 1.26
CCNE1-203ENST00000444983 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
CCNE1-203ENST00000444983 RICTORQ6R327 1708 aa22.94■■□□□ 1.26
CCNE1-203ENST00000444983 DENND4BO75064 1496 aaPredicted RBP22.94■■□□□ 1.26
CCNE1-203ENST00000444983 SHANK2Q9UPX8 1470 aa22.94■■□□□ 1.26
CCNE1-203ENST00000444983 ZNF518AQ6AHZ1 1483 aa22.93■■□□□ 1.26
CCNE1-203ENST00000444983 KDM5CP41229 1560 aa22.93■■□□□ 1.26
CCNE1-203ENST00000444983 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
CCNE1-203ENST00000444983 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
CCNE1-203ENST00000444983 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
CCNE1-203ENST00000444983 ITGAEP38570 1179 aa22.9■■□□□ 1.26
CCNE1-203ENST00000444983 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
CCNE1-203ENST00000444983 C9orf84Q5VXU9 1444 aa22.88■■□□□ 1.25
CCNE1-203ENST00000444983 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
CCNE1-203ENST00000444983 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
CCNE1-203ENST00000444983 ADGRL2O95490 1459 aa22.88■■□□□ 1.25
CCNE1-203ENST00000444983 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
CCNE1-203ENST00000444983 RTEL1-TNFRSF6BF6WH68 1400 aa22.86■■□□□ 1.25
CCNE1-203ENST00000444983 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
CCNE1-203ENST00000444983 INO80Q9ULG1 1556 aaPredicted RBP22.86■■□□□ 1.25
CCNE1-203ENST00000444983 ZMYM4Q5VZL5 1548 aa22.85■■□□□ 1.25
CCNE1-203ENST00000444983 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
CCNE1-203ENST00000444983 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
CCNE1-203ENST00000444983 NCOA1Q15788 1441 aa22.85■■□□□ 1.25
CCNE1-203ENST00000444983 ZFYVE16Q7Z3T8 1539 aa22.85■■□□□ 1.25
CCNE1-203ENST00000444983 CHIC2Q9UKJ5 165 aa22.84■■□□□ 1.25
CCNE1-203ENST00000444983 KIDINS220Q9ULH0 1771 aa22.83■■□□□ 1.25
CCNE1-203ENST00000444983 SPAG9O60271 1321 aaKnown RBP22.83■■□□□ 1.25
CCNE1-203ENST00000444983 ATP7AQ04656 1500 aa22.82■■□□□ 1.24
CCNE1-203ENST00000444983 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
CCNE1-203ENST00000444983 HECW2Q9P2P5 1572 aa22.82■■□□□ 1.24
CCNE1-203ENST00000444983 KDM6BO15054 1643 aa22.8■■□□□ 1.24
CCNE1-203ENST00000444983 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
CCNE1-203ENST00000444983 ANKRD30AQ9BXX3 1397 aa22.79■■□□□ 1.24
CCNE1-203ENST00000444983 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
CCNE1-203ENST00000444983 NAIPQ13075 1403 aa22.77■■□□□ 1.24
CCNE1-203ENST00000444983 GCC2Q8IWJ2 1684 aa22.75■■□□□ 1.23
CCNE1-203ENST00000444983 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
CCNE1-203ENST00000444983 ABCA6Q8N139 1617 aa22.74■■□□□ 1.23
CCNE1-203ENST00000444983 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
CCNE1-203ENST00000444983 YEATS2Q9ULM3 1422 aa22.73■■□□□ 1.23
CCNE1-203ENST00000444983 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
CCNE1-203ENST00000444983 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
CCNE1-203ENST00000444983 DUOX2Q9NRD8 1548 aa22.7■■□□□ 1.22
CCNE1-203ENST00000444983 ANKRD50Q9ULJ7 1429 aa22.67■■□□□ 1.22
CCNE1-203ENST00000444983 ARHGEF40Q8TER5 1519 aa22.67■■□□□ 1.22
CCNE1-203ENST00000444983 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
CCNE1-203ENST00000444983 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
CCNE1-203ENST00000444983 A2MP01023 1474 aa22.65■■□□□ 1.22
CCNE1-203ENST00000444983 ERBINQ96RT1 1412 aa22.65■■□□□ 1.22
CCNE1-203ENST00000444983 REREQ9P2R6 1566 aa22.65■■□□□ 1.22
CCNE1-203ENST00000444983 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
CCNE1-203ENST00000444983 ATP10AO60312 1499 aa22.65■■□□□ 1.22
CCNE1-203ENST00000444983 HRCP23327 699 aa22.65■■□□□ 1.22
CCNE1-203ENST00000444983 BCORL1Q5H9F3 1711 aa22.61■■□□□ 1.21
CCNE1-203ENST00000444983 EIF2AK4Q9P2K8 1649 aaKnown RBP22.61■■□□□ 1.21
CCNE1-203ENST00000444983 SIGLEC1Q9BZZ2 1709 aa22.58■■□□□ 1.21
CCNE1-203ENST00000444983 AGLP35573 1532 aa22.57■■□□□ 1.2
CCNE1-203ENST00000444983 DEPDC5O75140 1603 aa22.55■■□□□ 1.2
CCNE1-203ENST00000444983 UNC13BO14795 1591 aa22.54■■□□□ 1.2
CCNE1-203ENST00000444983 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms