RNA–Protein interactions for RNA: ENST00000444523.1

CCDC117-204, Transcript of coiled-coil domain containing 117, humanhuman

TSL 4

Gene CCDC117, Length 463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-204ENST00000444523 CDK11AQ9UQ88 783 aaPredicted RBP39.83■■■■□ 3.97
CCDC117-204ENST00000444523 PCF11O94913 1555 aaKnown RBP39.82■■■■□ 3.97
CCDC117-204ENST00000444523 POGZQ7Z3K3 1410 aa39.82■■■■□ 3.96
CCDC117-204ENST00000444523 ZFYVE16Q7Z3T8 1539 aa39.81■■■■□ 3.96
CCDC117-204ENST00000444523 CASKIN1Q8WXD9 1431 aa39.78■■■■□ 3.96
CCDC117-204ENST00000444523 MAGI2Q86UL8 1455 aa39.77■■■■□ 3.96
CCDC117-204ENST00000444523 EFCAB2Q5VUJ9 269 aa39.76■■■■□ 3.96
CCDC117-204ENST00000444523 RIMS1Q86UR5 1692 aaKnown RBP39.72■■■■□ 3.95
CCDC117-204ENST00000444523 CLIP1P30622 1438 aa39.7■■■■□ 3.95
CCDC117-204ENST00000444523 CDC42BPBQ9Y5S2 1711 aa39.7■■■■□ 3.95
CCDC117-204ENST00000444523 ARHGAP5Q13017 1502 aa39.66■■■■□ 3.94
CCDC117-204ENST00000444523 CCDC18Q5T9S5 1454 aa39.66■■■■□ 3.94
CCDC117-204ENST00000444523 ILDR1Q86SU0 546 aaPredicted RBP39.62■■■■□ 3.93
CCDC117-204ENST00000444523 FYCO1Q9BQS8 1478 aa39.6■■■■□ 3.93
CCDC117-204ENST00000444523 KDM5CP41229 1560 aa39.59■■■■□ 3.93
CCDC117-204ENST00000444523 ATP10AO60312 1499 aa39.59■■■■□ 3.93
CCDC117-204ENST00000444523 PREX2Q70Z35 1606 aa39.58■■■■□ 3.93
CCDC117-204ENST00000444523 AFAP1Q8N556 730 aa39.58■■■■□ 3.93
CCDC117-204ENST00000444523 ZNF518AQ6AHZ1 1483 aa39.56■■■■□ 3.92
CCDC117-204ENST00000444523 LMTK3Q96Q04 1460 aa39.54■■■■□ 3.92
CCDC117-204ENST00000444523 ARHGEF12Q9NZN5 1544 aa39.54■■■■□ 3.92
CCDC117-204ENST00000444523 MLECQ14165 292 aa39.53■■■■□ 3.92
CCDC117-204ENST00000444523 C9orf84Q5VXU9 1444 aa39.53■■■■□ 3.92
CCDC117-204ENST00000444523 CDC42BPAQ5VT25 1732 aa39.53■■■■□ 3.92
CCDC117-204ENST00000444523 FER1L4A9Z1Z3 1794 aa39.51■■■■□ 3.92
CCDC117-204ENST00000444523 ABCC1P33527 1531 aa39.48■■■■□ 3.91
CCDC117-204ENST00000444523 TRAPPC8Q9Y2L5 1435 aa39.46■■■■□ 3.91
CCDC117-204ENST00000444523 ITSN2Q9NZM3 1697 aa39.45■■■■□ 3.91
CCDC117-204ENST00000444523 DIP2CQ9Y2E4 1556 aa39.45■■■■□ 3.91
CCDC117-204ENST00000444523 PLPPR3Q6T4P5 718 aa39.42■■■■□ 3.9
CCDC117-204ENST00000444523 ABCA6Q8N139 1617 aa39.41■■■■□ 3.9
CCDC117-204ENST00000444523 MLH3Q9UHC1 1453 aa39.4■■■■□ 3.9
CCDC117-204ENST00000444523 REREQ9P2R6 1566 aa39.36■■■■□ 3.89
CCDC117-204ENST00000444523 GPATCH8Q9UKJ3 1502 aaKnown RBP39.35■■■■□ 3.89
CCDC117-204ENST00000444523 SAMD9LQ8IVG5 1584 aa39.33■■■■□ 3.89
CCDC117-204ENST00000444523 KIDINS220Q9ULH0 1771 aa39.33■■■■□ 3.89
CCDC117-204ENST00000444523 HSPA2P54652 639 aa39.31■■■■□ 3.88
CCDC117-204ENST00000444523 MYT1LQ9UL68 1186 aa39.29■■■■□ 3.88
CCDC117-204ENST00000444523 CEBPAP49715 358 aaPredicted RBP39.25■■■■□ 3.87
CCDC117-204ENST00000444523 ZNF777Q9ULD5 760 aaPredicted RBP39.23■■■■□ 3.87
CCDC117-204ENST00000444523 AGLP35573 1532 aa39.23■■■■□ 3.87
CCDC117-204ENST00000444523 SYCP2Q9BX26 1530 aa39.23■■■■□ 3.87
CCDC117-204ENST00000444523 CEP162Q5TB80 1403 aa39.22■■■■□ 3.87
CCDC117-204ENST00000444523 HNRNPMP52272 730 aaKnown RBP eCLIP39.17■■■■□ 3.86
CCDC117-204ENST00000444523 MTUS2Q5JR59 1369 aa39.16■■■■□ 3.86
CCDC117-204ENST00000444523 PREX1Q8TCU6 1659 aa39.15■■■■□ 3.86
CCDC117-204ENST00000444523 CCNB3Q8WWL7 1395 aa39.13■■■■□ 3.85
CCDC117-204ENST00000444523 KIAA1107Q9UPP5 1409 aa39.12■■■■□ 3.85
CCDC117-204ENST00000444523 CFDP1Q9UEE9 299 aaPredicted RBP39.11■■■■□ 3.85
CCDC117-204ENST00000444523 C3P01024 1663 aa39.1■■■■□ 3.85
CCDC117-204ENST00000444523 TIAM1Q13009 1591 aa39.1■■■■□ 3.85
CCDC117-204ENST00000444523 SETD1BQ9UPS6 1966 aaKnown RBP39.09■■■■□ 3.85
CCDC117-204ENST00000444523 EHBP1L1Q8N3D4 1523 aa39.08■■■■□ 3.85
CCDC117-204ENST00000444523 SPAG9O60271 1321 aaKnown RBP39.06■■■■□ 3.84
CCDC117-204ENST00000444523 INO80Q9ULG1 1556 aaPredicted RBP39.05■■■■□ 3.84
CCDC117-204ENST00000444523 PLEKHH2Q8IVE3 1493 aa39.05■■■■□ 3.84
CCDC117-204ENST00000444523 ATP7AQ04656 1500 aa39.04■■■■□ 3.84
CCDC117-204ENST00000444523 ZNF644Q9H582 1327 aaPredicted RBP39.03■■■■□ 3.84
CCDC117-204ENST00000444523 FBXO41Q8TF61 875 aa39.01■■■■□ 3.84
CCDC117-204ENST00000444523 SUPT6HQ7KZ85 1726 aaKnown RBP39■■■■□ 3.83
CCDC117-204ENST00000444523 LOC105371045A0A1W2PR82 267 aa38.97■■■■□ 3.83
CCDC117-204ENST00000444523 MBD5Q9P267 1494 aa38.97■■■■□ 3.83
CCDC117-204ENST00000444523 PLXNC1O60486 1568 aa38.96■■■■□ 3.83
CCDC117-204ENST00000444523 STRCQ7RTU9 1775 aa38.96■■■■□ 3.83
CCDC117-204ENST00000444523 UHRF1BP1Q6BDS2 1440 aa38.93■■■■□ 3.82
CCDC117-204ENST00000444523 CNTLNQ9NXG0 1405 aa38.9■■■■□ 3.82
CCDC117-204ENST00000444523 A2MP01023 1474 aa38.9■■■■□ 3.82
CCDC117-204ENST00000444523 MROH2AA6NES4 1674 aa38.87■■■■□ 3.81
CCDC117-204ENST00000444523 NCOA2Q15596 1464 aa38.87■■■■□ 3.81
CCDC117-204ENST00000444523 ESF1Q9H501 851 aaKnown RBP38.87■■■■□ 3.81
CCDC117-204ENST00000444523 ADGBQ8N7X0 1667 aa38.83■■■■□ 3.81
CCDC117-204ENST00000444523 CLTCQ00610 1675 aaKnown RBP38.81■■■■□ 3.8
CCDC117-204ENST00000444523 ZMYM3Q14202 1370 aa38.8■■■■□ 3.8
CCDC117-204ENST00000444523 VPS8Q8N3P4 1428 aa38.8■■■■□ 3.8
CCDC117-204ENST00000444523 RTEL1-TNFRSF6BF6WH68 1400 aa38.77■■■■□ 3.8
CCDC117-204ENST00000444523 CAMSAP2Q08AD1 1489 aa38.75■■■■□ 3.79
CCDC117-204ENST00000444523 NPATQ14207 1427 aa38.73■■■■□ 3.79
CCDC117-204ENST00000444523 CERKQ8TCT0 537 aa38.73■■■■□ 3.79
CCDC117-204ENST00000444523 GGT6Q6P531 493 aa38.71■■■■□ 3.79
CCDC117-204ENST00000444523 LRRC9Q6ZRR7 1453 aa38.71■■■■□ 3.79
CCDC117-204ENST00000444523 CCDC141Q6ZP82 1450 aa38.69■■■■□ 3.78
CCDC117-204ENST00000444523 DHX29Q7Z478 1369 aaKnown RBP38.67■■■■□ 3.78
CCDC117-204ENST00000444523 PTPRKQ15262 1439 aa38.65■■■■□ 3.78
CCDC117-204ENST00000444523 DMRT2Q9Y5R5 561 aa38.65■■■■□ 3.78
CCDC117-204ENST00000444523 KANK4Q5T7N3 995 aaPredicted RBP38.64■■■■□ 3.78
CCDC117-204ENST00000444523 PTPRTO14522 1441 aa38.63■■■■□ 3.78
CCDC117-204ENST00000444523 NCOA1Q15788 1441 aa38.63■■■■□ 3.78
CCDC117-204ENST00000444523 ARHGEF5Q12774 1597 aa38.61■■■■□ 3.77
CCDC117-204ENST00000444523 MAP3K1Q13233 1512 aa38.59■■■■□ 3.77
CCDC117-204ENST00000444523 PPP6R1Q9UPN7 881 aa38.59■■■■□ 3.77
CCDC117-204ENST00000444523 CAMSAP1Q5T5Y3 1602 aa38.58■■■■□ 3.77
CCDC117-204ENST00000444523 MYO3AQ8NEV4 1616 aa38.58■■■■□ 3.77
CCDC117-204ENST00000444523 RSPH4AQ5TD94 716 aa38.57■■■■□ 3.76
CCDC117-204ENST00000444523 ZNF142P52746 1687 aaPredicted RBP38.56■■■■□ 3.76
CCDC117-204ENST00000444523 KIF3BO15066 747 aa38.52■■■■□ 3.76
CCDC117-204ENST00000444523 CEP170BQ9Y4F5 1589 aaPredicted RBP38.49■■■■□ 3.75
CCDC117-204ENST00000444523 LTBP4Q8N2S1 1624 aa38.47■■■■□ 3.75
CCDC117-204ENST00000444523 MAST1Q9Y2H9 1570 aa38.44■■■■□ 3.74
CCDC117-204ENST00000444523 NCKAP5LQ9HCH0 1330 aa38.44■■■■□ 3.74
CCDC117-204ENST00000444523 MYOM3Q5VTT5 1437 aa38.43■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms