RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 ARHGAP5Q13017 1502 aa29.26■■■□□ 2.27
VCX3B-203ENST00000444481 ARHGEF40Q8TER5 1519 aa29.26■■■□□ 2.27
VCX3B-203ENST00000444481 POGZQ7Z3K3 1410 aa29.26■■■□□ 2.27
VCX3B-203ENST00000444481 ZFYVE16Q7Z3T8 1539 aa29.2■■■□□ 2.27
VCX3B-203ENST00000444481 CDC42BPBQ9Y5S2 1711 aa29.2■■■□□ 2.27
VCX3B-203ENST00000444481 ARID4BQ4LE39 1312 aaPredicted RBP29.2■■■□□ 2.26
VCX3B-203ENST00000444481 PREX2Q70Z35 1606 aa29.19■■■□□ 2.26
VCX3B-203ENST00000444481 ADAMTSL3P82987 1691 aa29.17■■■□□ 2.26
VCX3B-203ENST00000444481 ZNF518AQ6AHZ1 1483 aa29.17■■■□□ 2.26
VCX3B-203ENST00000444481 YEATS2Q9ULM3 1422 aa29.16■■■□□ 2.26
VCX3B-203ENST00000444481 BCORL1Q5H9F3 1711 aa29.15■■■□□ 2.26
VCX3B-203ENST00000444481 CDC42BPAQ5VT25 1732 aa29.12■■■□□ 2.25
VCX3B-203ENST00000444481 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
VCX3B-203ENST00000444481 MTUS2Q5JR59 1369 aa29.12■■■□□ 2.25
VCX3B-203ENST00000444481 KDM5CP41229 1560 aa29.09■■■□□ 2.25
VCX3B-203ENST00000444481 AFAP1Q8N556 730 aa29.09■■■□□ 2.25
VCX3B-203ENST00000444481 ATP10AO60312 1499 aa29.08■■■□□ 2.25
VCX3B-203ENST00000444481 ABCC1P33527 1531 aa29.07■■■□□ 2.24
VCX3B-203ENST00000444481 GPATCH8Q9UKJ3 1502 aaKnown RBP29.07■■■□□ 2.24
VCX3B-203ENST00000444481 PTPRMP28827 1452 aa29.06■■■□□ 2.24
VCX3B-203ENST00000444481 C9orf84Q5VXU9 1444 aa29.04■■■□□ 2.24
VCX3B-203ENST00000444481 MADDQ8WXG6 1647 aa29.03■■■□□ 2.24
VCX3B-203ENST00000444481 EHBP1L1Q8N3D4 1523 aa29.03■■■□□ 2.24
VCX3B-203ENST00000444481 MLH3Q9UHC1 1453 aa29.03■■■□□ 2.24
VCX3B-203ENST00000444481 CCNB3Q8WWL7 1395 aa29.02■■■□□ 2.24
VCX3B-203ENST00000444481 ARHGEF12Q9NZN5 1544 aa29.02■■■□□ 2.24
VCX3B-203ENST00000444481 ITSN2Q9NZM3 1697 aa29.02■■■□□ 2.24
VCX3B-203ENST00000444481 HECW2Q9P2P5 1572 aa29.01■■■□□ 2.24
VCX3B-203ENST00000444481 TRAPPC8Q9Y2L5 1435 aa29.01■■■□□ 2.23
VCX3B-203ENST00000444481 MYT1LQ9UL68 1186 aa29■■■□□ 2.23
VCX3B-203ENST00000444481 SIGLEC1Q9BZZ2 1709 aa29■■■□□ 2.23
VCX3B-203ENST00000444481 CFDP1Q9UEE9 299 aaPredicted RBP28.99■■■□□ 2.23
VCX3B-203ENST00000444481 ZNF777Q9ULD5 760 aaPredicted RBP28.99■■■□□ 2.23
VCX3B-203ENST00000444481 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
VCX3B-203ENST00000444481 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
VCX3B-203ENST00000444481 PLEKHH2Q8IVE3 1493 aa28.96■■■□□ 2.23
VCX3B-203ENST00000444481 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
VCX3B-203ENST00000444481 REREQ9P2R6 1566 aa28.94■■■□□ 2.22
VCX3B-203ENST00000444481 DIP2CQ9Y2E4 1556 aa28.93■■■□□ 2.22
VCX3B-203ENST00000444481 RIMS1Q86UR5 1692 aaKnown RBP28.93■■■□□ 2.22
VCX3B-203ENST00000444481 MLECQ14165 292 aa28.92■■■□□ 2.22
VCX3B-203ENST00000444481 SYCP2Q9BX26 1530 aa28.9■■■□□ 2.22
VCX3B-203ENST00000444481 TIAM1Q13009 1591 aa28.9■■■□□ 2.22
VCX3B-203ENST00000444481 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.22
VCX3B-203ENST00000444481 ABCA6Q8N139 1617 aa28.89■■■□□ 2.22
VCX3B-203ENST00000444481 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
VCX3B-203ENST00000444481 SUPT6HQ7KZ85 1726 aaKnown RBP28.86■■■□□ 2.21
VCX3B-203ENST00000444481 FER1L4A9Z1Z3 1794 aa28.86■■■□□ 2.21
VCX3B-203ENST00000444481 SPAG9O60271 1321 aaKnown RBP28.85■■■□□ 2.21
VCX3B-203ENST00000444481 NCOA2Q15596 1464 aa28.84■■■□□ 2.21
VCX3B-203ENST00000444481 AGLP35573 1532 aa28.84■■■□□ 2.21
VCX3B-203ENST00000444481 MAP3K1Q13233 1512 aa28.83■■■□□ 2.21
VCX3B-203ENST00000444481 LRRC9Q6ZRR7 1453 aa28.8■■■□□ 2.2
VCX3B-203ENST00000444481 ZNF644Q9H582 1327 aaPredicted RBP28.77■■■□□ 2.2
VCX3B-203ENST00000444481 ATP7AQ04656 1500 aa28.77■■■□□ 2.2
VCX3B-203ENST00000444481 MBD5Q9P267 1494 aa28.76■■■□□ 2.19
VCX3B-203ENST00000444481 INO80Q9ULG1 1556 aaPredicted RBP28.75■■■□□ 2.19
VCX3B-203ENST00000444481 RSPH4AQ5TD94 716 aa28.73■■■□□ 2.19
VCX3B-203ENST00000444481 LMTK3Q96Q04 1460 aa28.72■■■□□ 2.19
VCX3B-203ENST00000444481 PLPPR3Q6T4P5 718 aa28.72■■■□□ 2.19
VCX3B-203ENST00000444481 ESF1Q9H501 851 aaKnown RBP28.7■■■□□ 2.18
VCX3B-203ENST00000444481 RTEL1-TNFRSF6BF6WH68 1400 aa28.69■■■□□ 2.18
VCX3B-203ENST00000444481 CAMSAP2Q08AD1 1489 aa28.68■■■□□ 2.18
VCX3B-203ENST00000444481 KANK4Q5T7N3 995 aaPredicted RBP28.68■■■□□ 2.18
VCX3B-203ENST00000444481 A2MP01023 1474 aa28.67■■■□□ 2.18
VCX3B-203ENST00000444481 APLP2Q06481 763 aa28.67■■■□□ 2.18
VCX3B-203ENST00000444481 CCDC141Q6ZP82 1450 aa28.66■■■□□ 2.18
VCX3B-203ENST00000444481 CNTLNQ9NXG0 1405 aa28.65■■■□□ 2.18
VCX3B-203ENST00000444481 PLXNC1O60486 1568 aa28.65■■■□□ 2.18
VCX3B-203ENST00000444481 CEBPAP49715 358 aaPredicted RBP28.64■■■□□ 2.18
VCX3B-203ENST00000444481 ADGBQ8N7X0 1667 aa28.64■■■□□ 2.17
VCX3B-203ENST00000444481 ARHGEF5Q12774 1597 aa28.6■■■□□ 2.17
VCX3B-203ENST00000444481 MIA2Q96PC5 1412 aa28.6■■■□□ 2.17
VCX3B-203ENST00000444481 SETD1BQ9UPS6 1966 aaKnown RBP28.59■■■□□ 2.17
VCX3B-203ENST00000444481 MYOM3Q5VTT5 1437 aa28.58■■■□□ 2.17
VCX3B-203ENST00000444481 PREX1Q8TCU6 1659 aa28.58■■■□□ 2.16
VCX3B-203ENST00000444481 C3P01024 1663 aa28.57■■■□□ 2.16
VCX3B-203ENST00000444481 TSPY4P0CV99 314 aa28.56■■■□□ 2.16
VCX3B-203ENST00000444481 TSPY10P0CW01 314 aa28.56■■■□□ 2.16
VCX3B-203ENST00000444481 DHX29Q7Z478 1369 aaKnown RBP28.56■■■□□ 2.16
VCX3B-203ENST00000444481 PPP6R1Q9UPN7 881 aa28.56■■■□□ 2.16
VCX3B-203ENST00000444481 HSPA2P54652 639 aa28.54■■■□□ 2.16
VCX3B-203ENST00000444481 MROH2AA6NES4 1674 aa28.54■■■□□ 2.16
VCX3B-203ENST00000444481 UHRF1BP1Q6BDS2 1440 aa28.52■■■□□ 2.16
VCX3B-203ENST00000444481 GGT6Q6P531 493 aa28.51■■■□□ 2.15
VCX3B-203ENST00000444481 ZMYM3Q14202 1370 aa28.5■■■□□ 2.15
VCX3B-203ENST00000444481 NPATQ14207 1427 aa28.46■■■□□ 2.15
VCX3B-203ENST00000444481 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.15
VCX3B-203ENST00000444481 CLTCQ00610 1675 aaKnown RBP28.44■■■□□ 2.14
VCX3B-203ENST00000444481 KIF3BO15066 747 aa28.42■■■□□ 2.14
VCX3B-203ENST00000444481 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
VCX3B-203ENST00000444481 PTPN23Q9H3S7 1636 aa28.37■■■□□ 2.13
VCX3B-203ENST00000444481 FGD6Q6ZV73 1430 aa28.35■■■□□ 2.13
VCX3B-203ENST00000444481 DMRT2Q9Y5R5 561 aa28.34■■■□□ 2.13
VCX3B-203ENST00000444481 PTPRKQ15262 1439 aa28.34■■■□□ 2.13
VCX3B-203ENST00000444481 ILDR1Q86SU0 546 aaPredicted RBP28.33■■■□□ 2.13
VCX3B-203ENST00000444481 TCOF1Q13428 1488 aaKnown RBP28.33■■■□□ 2.13
VCX3B-203ENST00000444481 SHANK2Q9UPX8 1470 aa28.32■■■□□ 2.12
VCX3B-203ENST00000444481 ABCC5O15440 1437 aa28.31■■■□□ 2.12
VCX3B-203ENST00000444481 KDM5DQ9BY66 1539 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms