RNA–Protein interactions for RNA: ENST00000444263.5

LINC00278-202, long intergenic non-protein coding RNA 278, humanhuman

TSL 3 BASIC

Gene LINC00278, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-202ENST00000444263 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
LINC00278-202ENST00000444263 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
LINC00278-202ENST00000444263 ZSWIM6Q9HCJ5 1215 aa11.34□□□□□ -0.59
LINC00278-202ENST00000444263 ERBB3P21860 1342 aa11.34□□□□□ -0.59
LINC00278-202ENST00000444263 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
LINC00278-202ENST00000444263 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
LINC00278-202ENST00000444263 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
LINC00278-202ENST00000444263 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
LINC00278-202ENST00000444263 VARS2Q5ST30 1063 aaKnown RBP11.26□□□□□ -0.61
LINC00278-202ENST00000444263 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
LINC00278-202ENST00000444263 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
LINC00278-202ENST00000444263 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
LINC00278-202ENST00000444263 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
LINC00278-202ENST00000444263 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
LINC00278-202ENST00000444263 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
LINC00278-202ENST00000444263 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
LINC00278-202ENST00000444263 ARSIQ5FYB1 569 aa11.22□□□□□ -0.61
LINC00278-202ENST00000444263 KIF3CO14782 793 aa11.21□□□□□ -0.61
LINC00278-202ENST00000444263 PPP1R37O75864 691 aa11.19□□□□□ -0.62
LINC00278-202ENST00000444263 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
LINC00278-202ENST00000444263 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
LINC00278-202ENST00000444263 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00278-202ENST00000444263 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
LINC00278-202ENST00000444263 NUDT7P0C024 238 aa11.12□□□□□ -0.63
LINC00278-202ENST00000444263 SLC34A2O95436 690 aa11.11□□□□□ -0.63
LINC00278-202ENST00000444263 PCDHGA4Q9Y5G9 962 aa11.11□□□□□ -0.63
LINC00278-202ENST00000444263 DCAF8L2P0C7V8 631 aa11.07□□□□□ -0.64
LINC00278-202ENST00000444263 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
LINC00278-202ENST00000444263 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
LINC00278-202ENST00000444263 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
LINC00278-202ENST00000444263 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
LINC00278-202ENST00000444263 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
LINC00278-202ENST00000444263 FOXK1P85037 733 aa11.03□□□□□ -0.64
LINC00278-202ENST00000444263 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
LINC00278-202ENST00000444263 RNF166Q96A37 237 aaPredicted RBP11.03□□□□□ -0.64
LINC00278-202ENST00000444263 PTGER2P43116 358 aa11.02□□□□□ -0.65
LINC00278-202ENST00000444263 PBX2P40425 430 aa11.01□□□□□ -0.65
LINC00278-202ENST00000444263 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
LINC00278-202ENST00000444263 PSDA5PKW4 1024 aaPredicted RBP11□□□□□ -0.65
LINC00278-202ENST00000444263 TBC1D12O60347 775 aa11□□□□□ -0.65
LINC00278-202ENST00000444263 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00278-202ENST00000444263 DSG2Q14126 1118 aa10.99□□□□□ -0.65
LINC00278-202ENST00000444263 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
LINC00278-202ENST00000444263 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
LINC00278-202ENST00000444263 PPP1R15BQ5SWA1 713 aa10.92□□□□□ -0.66
LINC00278-202ENST00000444263 PDE4AP27815 886 aa10.91□□□□□ -0.66
LINC00278-202ENST00000444263 UPF1Q92900 1129 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC00278-202ENST00000444263 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
LINC00278-202ENST00000444263 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
LINC00278-202ENST00000444263 ARHGAP33O14559 1287 aa10.89□□□□□ -0.67
LINC00278-202ENST00000444263 GTPBP6O43824 516 aaPredicted RBP10.89□□□□□ -0.67
LINC00278-202ENST00000444263 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
LINC00278-202ENST00000444263 KDM4FA0A1W2PPD8 638 aa10.87□□□□□ -0.67
LINC00278-202ENST00000444263 POTEEQ6S8J3 1075 aa10.87□□□□□ -0.67
LINC00278-202ENST00000444263 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
LINC00278-202ENST00000444263 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
LINC00278-202ENST00000444263 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
LINC00278-202ENST00000444263 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
LINC00278-202ENST00000444263 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
LINC00278-202ENST00000444263 PSEN2P49810 448 aa10.81□□□□□ -0.68
LINC00278-202ENST00000444263 ZNF454Q8N9F8 522 aa10.8□□□□□ -0.68
LINC00278-202ENST00000444263 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
LINC00278-202ENST00000444263 TK2O00142 265 aa10.79□□□□□ -0.68
LINC00278-202ENST00000444263 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
LINC00278-202ENST00000444263 DMRTA1Q5VZB9 504 aa10.78□□□□□ -0.68
LINC00278-202ENST00000444263 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
LINC00278-202ENST00000444263 MFSD10Q14728 455 aa10.75□□□□□ -0.69
LINC00278-202ENST00000444263 EVI5O60447 810 aa10.74□□□□□ -0.69
LINC00278-202ENST00000444263 FOSBP53539 338 aa10.72□□□□□ -0.69
LINC00278-202ENST00000444263 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
LINC00278-202ENST00000444263 HCSTQ9UBK5 93 aa10.72□□□□□ -0.69
LINC00278-202ENST00000444263 PTPREP23469 700 aa10.71□□□□□ -0.69
LINC00278-202ENST00000444263 BCL2L12Q9HB09 334 aa10.71□□□□□ -0.69
LINC00278-202ENST00000444263 HRO43593 1189 aa10.7□□□□□ -0.7
LINC00278-202ENST00000444263 BBXQ8WY36 941 aaPredicted RBP10.7□□□□□ -0.7
LINC00278-202ENST00000444263 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
LINC00278-202ENST00000444263 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
LINC00278-202ENST00000444263 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
LINC00278-202ENST00000444263 ZDHHC16Q969W1 377 aa10.68□□□□□ -0.7
LINC00278-202ENST00000444263 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
LINC00278-202ENST00000444263 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
LINC00278-202ENST00000444263 VPS9D1Q9Y2B5 631 aa10.66□□□□□ -0.7
LINC00278-202ENST00000444263 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
LINC00278-202ENST00000444263 SLC4A5Q9BY07 1137 aa10.64□□□□□ -0.71
LINC00278-202ENST00000444263 ADAM33Q9BZ11 813 aa10.63□□□□□ -0.71
LINC00278-202ENST00000444263 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
LINC00278-202ENST00000444263 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
LINC00278-202ENST00000444263 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
LINC00278-202ENST00000444263 ZBED2Q9BTP6 218 aa10.61□□□□□ -0.71
LINC00278-202ENST00000444263 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
LINC00278-202ENST00000444263 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
LINC00278-202ENST00000444263 FBXW7Q969H0 707 aa10.59□□□□□ -0.71
LINC00278-202ENST00000444263 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
LINC00278-202ENST00000444263 PHF14O94880 888 aa10.58□□□□□ -0.72
LINC00278-202ENST00000444263 CAMK2BQ13554 666 aa10.58□□□□□ -0.72
LINC00278-202ENST00000444263 PCDHGA10Q9Y5H3 936 aa10.58□□□□□ -0.72
LINC00278-202ENST00000444263 PPP1R3GB7ZBB8 358 aa10.57□□□□□ -0.72
LINC00278-202ENST00000444263 DPYSL4O14531 572 aa10.57□□□□□ -0.72
LINC00278-202ENST00000444263 PTPN5P54829 565 aa10.56□□□□□ -0.72
LINC00278-202ENST00000444263 WNT2BQ93097 391 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms