RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
SHC1-208ENST00000444179 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
SHC1-208ENST00000444179 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
SHC1-208ENST00000444179 CLIP1P30622 1438 aa17.78■□□□□ 0.44
SHC1-208ENST00000444179 ZFYVE16Q7Z3T8 1539 aa17.77■□□□□ 0.43
SHC1-208ENST00000444179 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
SHC1-208ENST00000444179 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
SHC1-208ENST00000444179 AFAP1Q8N556 730 aa17.75■□□□□ 0.43
SHC1-208ENST00000444179 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
SHC1-208ENST00000444179 CCDC18Q5T9S5 1454 aa17.74■□□□□ 0.43
SHC1-208ENST00000444179 ARHGAP5Q13017 1502 aa17.73■□□□□ 0.43
SHC1-208ENST00000444179 FYCO1Q9BQS8 1478 aa17.73■□□□□ 0.43
SHC1-208ENST00000444179 ARHGEF12Q9NZN5 1544 aa17.71■□□□□ 0.43
SHC1-208ENST00000444179 ATP10AO60312 1499 aa17.7■□□□□ 0.42
SHC1-208ENST00000444179 MLECQ14165 292 aa17.7■□□□□ 0.42
SHC1-208ENST00000444179 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
SHC1-208ENST00000444179 ZNF518AQ6AHZ1 1483 aa17.68■□□□□ 0.42
SHC1-208ENST00000444179 KDM5CP41229 1560 aa17.67■□□□□ 0.42
SHC1-208ENST00000444179 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
SHC1-208ENST00000444179 RIMS1Q86UR5 1692 aaKnown RBP17.66■□□□□ 0.42
SHC1-208ENST00000444179 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
SHC1-208ENST00000444179 ILDR1Q86SU0 546 aaPredicted RBP17.65■□□□□ 0.42
SHC1-208ENST00000444179 C9orf84Q5VXU9 1444 aa17.64■□□□□ 0.42
SHC1-208ENST00000444179 LMTK3Q96Q04 1460 aa17.64■□□□□ 0.41
SHC1-208ENST00000444179 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
SHC1-208ENST00000444179 ABCC1P33527 1531 aa17.63■□□□□ 0.41
SHC1-208ENST00000444179 GPATCH8Q9UKJ3 1502 aaKnown RBP17.63■□□□□ 0.41
SHC1-208ENST00000444179 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
SHC1-208ENST00000444179 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
SHC1-208ENST00000444179 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
SHC1-208ENST00000444179 CDC42BPAQ5VT25 1732 aa17.61■□□□□ 0.41
SHC1-208ENST00000444179 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
SHC1-208ENST00000444179 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
SHC1-208ENST00000444179 ABCA6Q8N139 1617 aa17.58■□□□□ 0.41
SHC1-208ENST00000444179 LOC105371045A0A1W2PR82 267 aa17.58■□□□□ 0.4
SHC1-208ENST00000444179 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
SHC1-208ENST00000444179 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHC1-208ENST00000444179 HSPA2P54652 639 aa17.58■□□□□ 0.4
SHC1-208ENST00000444179 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
SHC1-208ENST00000444179 ITSN2Q9NZM3 1697 aa17.57■□□□□ 0.4
SHC1-208ENST00000444179 REREQ9P2R6 1566 aa17.55■□□□□ 0.4
SHC1-208ENST00000444179 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
SHC1-208ENST00000444179 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
SHC1-208ENST00000444179 CFDP1Q9UEE9 299 aaPredicted RBP17.54■□□□□ 0.4
SHC1-208ENST00000444179 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
SHC1-208ENST00000444179 KIDINS220Q9ULH0 1771 aa17.53■□□□□ 0.4
SHC1-208ENST00000444179 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
SHC1-208ENST00000444179 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
SHC1-208ENST00000444179 AGLP35573 1532 aa17.52■□□□□ 0.39
SHC1-208ENST00000444179 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
SHC1-208ENST00000444179 SPAG9O60271 1321 aaKnown RBP17.5■□□□□ 0.39
SHC1-208ENST00000444179 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
SHC1-208ENST00000444179 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
SHC1-208ENST00000444179 PLEKHH2Q8IVE3 1493 aa17.46■□□□□ 0.39
SHC1-208ENST00000444179 MBD5Q9P267 1494 aa17.46■□□□□ 0.39
SHC1-208ENST00000444179 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
SHC1-208ENST00000444179 INO80Q9ULG1 1556 aaPredicted RBP17.43■□□□□ 0.38
SHC1-208ENST00000444179 NCOA2Q15596 1464 aa17.43■□□□□ 0.38
SHC1-208ENST00000444179 PLXNC1O60486 1568 aa17.4■□□□□ 0.38
SHC1-208ENST00000444179 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
SHC1-208ENST00000444179 C3P01024 1663 aa17.4■□□□□ 0.38
SHC1-208ENST00000444179 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
SHC1-208ENST00000444179 A2MP01023 1474 aa17.4■□□□□ 0.38
SHC1-208ENST00000444179 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
SHC1-208ENST00000444179 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
SHC1-208ENST00000444179 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
SHC1-208ENST00000444179 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
SHC1-208ENST00000444179 CNTLNQ9NXG0 1405 aa17.38■□□□□ 0.37
SHC1-208ENST00000444179 SUPT6HQ7KZ85 1726 aaKnown RBP17.37■□□□□ 0.37
SHC1-208ENST00000444179 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
SHC1-208ENST00000444179 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
SHC1-208ENST00000444179 GGT6Q6P531 493 aa17.35■□□□□ 0.37
SHC1-208ENST00000444179 RTEL1-TNFRSF6BF6WH68 1400 aa17.35■□□□□ 0.37
SHC1-208ENST00000444179 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
SHC1-208ENST00000444179 STRCQ7RTU9 1775 aa17.33■□□□□ 0.36
SHC1-208ENST00000444179 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
SHC1-208ENST00000444179 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
SHC1-208ENST00000444179 NPATQ14207 1427 aa17.3■□□□□ 0.36
SHC1-208ENST00000444179 SETD1BQ9UPS6 1966 aaKnown RBP17.29■□□□□ 0.36
SHC1-208ENST00000444179 MROH2AA6NES4 1674 aa17.29■□□□□ 0.36
SHC1-208ENST00000444179 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
SHC1-208ENST00000444179 CERKQ8TCT0 537 aa17.29■□□□□ 0.36
SHC1-208ENST00000444179 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
SHC1-208ENST00000444179 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
SHC1-208ENST00000444179 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
SHC1-208ENST00000444179 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
SHC1-208ENST00000444179 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
SHC1-208ENST00000444179 KIF3BO15066 747 aa17.26■□□□□ 0.35
SHC1-208ENST00000444179 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
SHC1-208ENST00000444179 ARHGEF5Q12774 1597 aa17.26■□□□□ 0.35
SHC1-208ENST00000444179 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
SHC1-208ENST00000444179 PTPRTO14522 1441 aa17.23■□□□□ 0.35
SHC1-208ENST00000444179 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
SHC1-208ENST00000444179 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
SHC1-208ENST00000444179 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
SHC1-208ENST00000444179 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
SHC1-208ENST00000444179 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
SHC1-208ENST00000444179 MIA2Q96PC5 1412 aa17.21■□□□□ 0.34
SHC1-208ENST00000444179 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
SHC1-208ENST00000444179 MYO3AQ8NEV4 1616 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms