RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
HDLBP-221ENST00000444092 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
HDLBP-221ENST00000444092 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
HDLBP-221ENST00000444092 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
HDLBP-221ENST00000444092 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
HDLBP-221ENST00000444092 KIF14Q15058 1648 aa16.53■□□□□ 0.24
HDLBP-221ENST00000444092 MLECQ14165 292 aa16.53■□□□□ 0.24
HDLBP-221ENST00000444092 FER1L4A9Z1Z3 1794 aa16.53■□□□□ 0.24
HDLBP-221ENST00000444092 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
HDLBP-221ENST00000444092 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
HDLBP-221ENST00000444092 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
HDLBP-221ENST00000444092 CLIP1P30622 1438 aa16.5■□□□□ 0.23
HDLBP-221ENST00000444092 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-221ENST00000444092 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
HDLBP-221ENST00000444092 ATP10AO60312 1499 aa16.48■□□□□ 0.23
HDLBP-221ENST00000444092 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
HDLBP-221ENST00000444092 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
HDLBP-221ENST00000444092 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
HDLBP-221ENST00000444092 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
HDLBP-221ENST00000444092 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
HDLBP-221ENST00000444092 HSPA2P54652 639 aa16.44■□□□□ 0.22
HDLBP-221ENST00000444092 AFAP1Q8N556 730 aa16.42■□□□□ 0.22
HDLBP-221ENST00000444092 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
HDLBP-221ENST00000444092 ARHGEF12Q9NZN5 1544 aa16.41■□□□□ 0.22
HDLBP-221ENST00000444092 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
HDLBP-221ENST00000444092 KDM5CP41229 1560 aa16.4■□□□□ 0.22
HDLBP-221ENST00000444092 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
HDLBP-221ENST00000444092 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
HDLBP-221ENST00000444092 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
HDLBP-221ENST00000444092 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
HDLBP-221ENST00000444092 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
HDLBP-221ENST00000444092 SETD1BQ9UPS6 1966 aaKnown RBP16.37■□□□□ 0.21
HDLBP-221ENST00000444092 CEBPAP49715 358 aaPredicted RBP16.36■□□□□ 0.21
HDLBP-221ENST00000444092 ABCC1P33527 1531 aa16.35■□□□□ 0.21
HDLBP-221ENST00000444092 ABCA6Q8N139 1617 aa16.35■□□□□ 0.21
HDLBP-221ENST00000444092 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
HDLBP-221ENST00000444092 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
HDLBP-221ENST00000444092 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
HDLBP-221ENST00000444092 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
HDLBP-221ENST00000444092 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.2
HDLBP-221ENST00000444092 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
HDLBP-221ENST00000444092 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-221ENST00000444092 C3P01024 1663 aa16.3■□□□□ 0.2
HDLBP-221ENST00000444092 UHRF1BP1Q6BDS2 1440 aa16.29■□□□□ 0.2
HDLBP-221ENST00000444092 AGLP35573 1532 aa16.28■□□□□ 0.2
HDLBP-221ENST00000444092 CERKQ8TCT0 537 aa16.27■□□□□ 0.2
HDLBP-221ENST00000444092 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
HDLBP-221ENST00000444092 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
HDLBP-221ENST00000444092 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
HDLBP-221ENST00000444092 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
HDLBP-221ENST00000444092 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
HDLBP-221ENST00000444092 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
HDLBP-221ENST00000444092 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
HDLBP-221ENST00000444092 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.191e-15■□□□□ 9.2
HDLBP-221ENST00000444092 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
HDLBP-221ENST00000444092 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
HDLBP-221ENST00000444092 MTUS2Q5JR59 1369 aa16.22■□□□□ 0.19
HDLBP-221ENST00000444092 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
HDLBP-221ENST00000444092 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
HDLBP-221ENST00000444092 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
HDLBP-221ENST00000444092 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
HDLBP-221ENST00000444092 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
HDLBP-221ENST00000444092 CLTCQ00610 1675 aaKnown RBP16.17■□□□□ 0.18
HDLBP-221ENST00000444092 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
HDLBP-221ENST00000444092 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
HDLBP-221ENST00000444092 A2MP01023 1474 aa16.15■□□□□ 0.18
HDLBP-221ENST00000444092 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
HDLBP-221ENST00000444092 ZMYM3Q14202 1370 aa16.14■□□□□ 0.17
HDLBP-221ENST00000444092 PTPRTO14522 1441 aa16.14■□□□□ 0.17
HDLBP-221ENST00000444092 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
HDLBP-221ENST00000444092 GGT6Q6P531 493 aa16.13■□□□□ 0.17
HDLBP-221ENST00000444092 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
HDLBP-221ENST00000444092 NPATQ14207 1427 aa16.12■□□□□ 0.17
HDLBP-221ENST00000444092 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
HDLBP-221ENST00000444092 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
HDLBP-221ENST00000444092 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-221ENST00000444092 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
HDLBP-221ENST00000444092 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.16
HDLBP-221ENST00000444092 ZNF142P52746 1687 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-221ENST00000444092 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
HDLBP-221ENST00000444092 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
HDLBP-221ENST00000444092 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
HDLBP-221ENST00000444092 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
HDLBP-221ENST00000444092 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-221ENST00000444092 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
HDLBP-221ENST00000444092 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
HDLBP-221ENST00000444092 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
HDLBP-221ENST00000444092 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
HDLBP-221ENST00000444092 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.16
HDLBP-221ENST00000444092 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
HDLBP-221ENST00000444092 KIF3BO15066 747 aa16.01■□□□□ 0.15
HDLBP-221ENST00000444092 PKD2Q13563 968 aa16.01■□□□□ 0.15
HDLBP-221ENST00000444092 RSPH4AQ5TD94 716 aa16.01■□□□□ 0.15
HDLBP-221ENST00000444092 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
HDLBP-221ENST00000444092 PLA2R1Q13018 1463 aa16■□□□□ 0.15
HDLBP-221ENST00000444092 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
HDLBP-221ENST00000444092 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
HDLBP-221ENST00000444092 DISP3Q9P2K9 1392 aa15.98■□□□□ 0.15
HDLBP-221ENST00000444092 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
HDLBP-221ENST00000444092 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms