RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 ZMYM4Q5VZL5 1548 aa32.8■■■□□ 2.84
UBE2D4-205ENST00000443780 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
UBE2D4-205ENST00000443780 ARHGEF40Q8TER5 1519 aa32.78■■■□□ 2.84
UBE2D4-205ENST00000443780 PREX2Q70Z35 1606 aa32.77■■■□□ 2.84
UBE2D4-205ENST00000443780 POGZQ7Z3K3 1410 aa32.75■■■□□ 2.83
UBE2D4-205ENST00000443780 CDC42BPAQ5VT25 1732 aa32.74■■■□□ 2.83
UBE2D4-205ENST00000443780 MAGI2Q86UL8 1455 aa32.71■■■□□ 2.83
UBE2D4-205ENST00000443780 ZFYVE16Q7Z3T8 1539 aa32.7■■■□□ 2.83
UBE2D4-205ENST00000443780 ADAMTSL3P82987 1691 aa32.68■■■□□ 2.82
UBE2D4-205ENST00000443780 BCORL1Q5H9F3 1711 aa32.67■■■□□ 2.82
UBE2D4-205ENST00000443780 YEATS2Q9ULM3 1422 aa32.67■■■□□ 2.82
UBE2D4-205ENST00000443780 ARID4BQ4LE39 1312 aaPredicted RBP32.65■■■□□ 2.82
UBE2D4-205ENST00000443780 ZNF518AQ6AHZ1 1483 aa32.63■■■□□ 2.81
UBE2D4-205ENST00000443780 MTUS2Q5JR59 1369 aa32.62■■■□□ 2.81
UBE2D4-205ENST00000443780 KDM5CP41229 1560 aa32.6■■■□□ 2.81
UBE2D4-205ENST00000443780 ABCC1P33527 1531 aa32.6■■■□□ 2.81
UBE2D4-205ENST00000443780 SIGLEC1Q9BZZ2 1709 aa32.6■■■□□ 2.81
UBE2D4-205ENST00000443780 ITSN2Q9NZM3 1697 aa32.59■■■□□ 2.81
UBE2D4-205ENST00000443780 GPATCH8Q9UKJ3 1502 aaKnown RBP32.59■■■□□ 2.81
UBE2D4-205ENST00000443780 AFAP1Q8N556 730 aa32.58■■■□□ 2.81
UBE2D4-205ENST00000443780 EHBP1L1Q8N3D4 1523 aa32.56■■■□□ 2.8
UBE2D4-205ENST00000443780 ARHGEF12Q9NZN5 1544 aa32.56■■■□□ 2.8
UBE2D4-205ENST00000443780 MADDQ8WXG6 1647 aa32.55■■■□□ 2.8
UBE2D4-205ENST00000443780 ATP10AO60312 1499 aa32.54■■■□□ 2.8
UBE2D4-205ENST00000443780 HECW2Q9P2P5 1572 aa32.53■■■□□ 2.8
UBE2D4-205ENST00000443780 SAMD9LQ8IVG5 1584 aa32.52■■■□□ 2.8
UBE2D4-205ENST00000443780 VPS8Q8N3P4 1428 aa32.51■■■□□ 2.8
UBE2D4-205ENST00000443780 TRAPPC8Q9Y2L5 1435 aa32.51■■■□□ 2.8
UBE2D4-205ENST00000443780 CCNB3Q8WWL7 1395 aa32.51■■■□□ 2.79
UBE2D4-205ENST00000443780 PTPRMP28827 1452 aa32.5■■■□□ 2.79
UBE2D4-205ENST00000443780 ZNF777Q9ULD5 760 aaPredicted RBP32.49■■■□□ 2.79
UBE2D4-205ENST00000443780 C9orf84Q5VXU9 1444 aa32.48■■■□□ 2.79
UBE2D4-205ENST00000443780 MLH3Q9UHC1 1453 aa32.47■■■□□ 2.79
UBE2D4-205ENST00000443780 TIAM1Q13009 1591 aa32.46■■■□□ 2.79
UBE2D4-205ENST00000443780 CFDP1Q9UEE9 299 aaPredicted RBP32.46■■■□□ 2.79
UBE2D4-205ENST00000443780 RIMS1Q86UR5 1692 aaKnown RBP32.46■■■□□ 2.79
UBE2D4-205ENST00000443780 MYT1LQ9UL68 1186 aa32.45■■■□□ 2.79
UBE2D4-205ENST00000443780 DIP2CQ9Y2E4 1556 aa32.45■■■□□ 2.78
UBE2D4-205ENST00000443780 SYCP2Q9BX26 1530 aa32.43■■■□□ 2.78
UBE2D4-205ENST00000443780 ABCA6Q8N139 1617 aa32.43■■■□□ 2.78
UBE2D4-205ENST00000443780 KIDINS220Q9ULH0 1771 aa32.42■■■□□ 2.78
UBE2D4-205ENST00000443780 SUPT6HQ7KZ85 1726 aaKnown RBP32.41■■■□□ 2.78
UBE2D4-205ENST00000443780 PLEKHH2Q8IVE3 1493 aa32.4■■■□□ 2.78
UBE2D4-205ENST00000443780 FER1L4A9Z1Z3 1794 aa32.39■■■□□ 2.78
UBE2D4-205ENST00000443780 KIAA1107Q9UPP5 1409 aa32.38■■■□□ 2.77
UBE2D4-205ENST00000443780 HNRNPMP52272 730 aaKnown RBP eCLIP32.38■■■□□ 2.77
UBE2D4-205ENST00000443780 MLECQ14165 292 aa32.38■■■□□ 2.77
UBE2D4-205ENST00000443780 REREQ9P2R6 1566 aa32.37■■■□□ 2.77
UBE2D4-205ENST00000443780 NCOA2Q15596 1464 aa32.35■■■□□ 2.77
UBE2D4-205ENST00000443780 LRRC9Q6ZRR7 1453 aa32.31■■■□□ 2.76
UBE2D4-205ENST00000443780 MAP3K1Q13233 1512 aa32.31■■■□□ 2.76
UBE2D4-205ENST00000443780 SPAG9O60271 1321 aaKnown RBP32.29■■■□□ 2.76
UBE2D4-205ENST00000443780 ZNF644Q9H582 1327 aaPredicted RBP32.29■■■□□ 2.76
UBE2D4-205ENST00000443780 AGLP35573 1532 aa32.26■■■□□ 2.76
UBE2D4-205ENST00000443780 INO80Q9ULG1 1556 aaPredicted RBP32.25■■■□□ 2.75
UBE2D4-205ENST00000443780 ATP7AQ04656 1500 aa32.25■■■□□ 2.75
UBE2D4-205ENST00000443780 MBD5Q9P267 1494 aa32.23■■■□□ 2.75
UBE2D4-205ENST00000443780 KANK4Q5T7N3 995 aaPredicted RBP32.21■■■□□ 2.75
UBE2D4-205ENST00000443780 PLPPR3Q6T4P5 718 aa32.2■■■□□ 2.75
UBE2D4-205ENST00000443780 CAMSAP2Q08AD1 1489 aa32.17■■■□□ 2.74
UBE2D4-205ENST00000443780 ADGBQ8N7X0 1667 aa32.13■■■□□ 2.73
UBE2D4-205ENST00000443780 LMTK3Q96Q04 1460 aa32.12■■■□□ 2.73
UBE2D4-205ENST00000443780 PLXNC1O60486 1568 aa32.11■■■□□ 2.73
UBE2D4-205ENST00000443780 A2MP01023 1474 aa32.1■■■□□ 2.73
UBE2D4-205ENST00000443780 APLP2Q06481 763 aa32.1■■■□□ 2.73
UBE2D4-205ENST00000443780 CCDC141Q6ZP82 1450 aa32.1■■■□□ 2.73
UBE2D4-205ENST00000443780 RTEL1-TNFRSF6BF6WH68 1400 aa32.09■■■□□ 2.73
UBE2D4-205ENST00000443780 SETD1BQ9UPS6 1966 aaKnown RBP32.08■■■□□ 2.73
UBE2D4-205ENST00000443780 CEBPAP49715 358 aaPredicted RBP32.08■■■□□ 2.73
UBE2D4-205ENST00000443780 RSPH4AQ5TD94 716 aa32.08■■■□□ 2.73
UBE2D4-205ENST00000443780 ARHGEF5Q12774 1597 aa32.07■■■□□ 2.72
UBE2D4-205ENST00000443780 C3P01024 1663 aa32.06■■■□□ 2.72
UBE2D4-205ENST00000443780 ESF1Q9H501 851 aaKnown RBP32.05■■■□□ 2.72
UBE2D4-205ENST00000443780 MYOM3Q5VTT5 1437 aa32.04■■■□□ 2.72
UBE2D4-205ENST00000443780 PREX1Q8TCU6 1659 aa32.02■■■□□ 2.72
UBE2D4-205ENST00000443780 MIA2Q96PC5 1412 aa32.01■■■□□ 2.72
UBE2D4-205ENST00000443780 CNTLNQ9NXG0 1405 aa32■■■□□ 2.71
UBE2D4-205ENST00000443780 MROH2AA6NES4 1674 aa31.98■■■□□ 2.71
UBE2D4-205ENST00000443780 HSPA2P54652 639 aa31.95■■■□□ 2.71
UBE2D4-205ENST00000443780 DHX29Q7Z478 1369 aaKnown RBP31.94■■■□□ 2.7
UBE2D4-205ENST00000443780 TSPY4P0CV99 314 aa31.94■■■□□ 2.7
UBE2D4-205ENST00000443780 TSPY10P0CW01 314 aa31.94■■■□□ 2.7
UBE2D4-205ENST00000443780 CLTCQ00610 1675 aaKnown RBP31.94■■■□□ 2.7
UBE2D4-205ENST00000443780 GGT6Q6P531 493 aa31.91■■■□□ 2.7
UBE2D4-205ENST00000443780 MAST1Q9Y2H9 1570 aa31.9■■■□□ 2.7
UBE2D4-205ENST00000443780 PTPN23Q9H3S7 1636 aa31.87■■■□□ 2.69
UBE2D4-205ENST00000443780 ZMYM3Q14202 1370 aa31.86■■■□□ 2.69
UBE2D4-205ENST00000443780 PPP6R1Q9UPN7 881 aa31.86■■■□□ 2.69
UBE2D4-205ENST00000443780 UHRF1BP1Q6BDS2 1440 aa31.85■■■□□ 2.69
UBE2D4-205ENST00000443780 KIF3BO15066 747 aa31.83■■■□□ 2.69
UBE2D4-205ENST00000443780 FGD6Q6ZV73 1430 aa31.81■■■□□ 2.68
UBE2D4-205ENST00000443780 NPATQ14207 1427 aa31.8■■■□□ 2.68
UBE2D4-205ENST00000443780 CROCC2H7BZ55 1655 aa31.8■■■□□ 2.68
UBE2D4-205ENST00000443780 TCOF1Q13428 1488 aaKnown RBP31.77■■■□□ 2.68
UBE2D4-205ENST00000443780 ABCC5O15440 1437 aa31.75■■■□□ 2.67
UBE2D4-205ENST00000443780 DNMT1P26358 1616 aaKnown RBP31.74■■■□□ 2.67
UBE2D4-205ENST00000443780 STRCQ7RTU9 1775 aa31.73■■■□□ 2.67
UBE2D4-205ENST00000443780 SHANK2Q9UPX8 1470 aa31.72■■■□□ 2.67
UBE2D4-205ENST00000443780 FAM135AQ9P2D6 1515 aa31.72■■■□□ 2.67
UBE2D4-205ENST00000443780 PTPRKQ15262 1439 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms