RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 TEX14Q8IWB6 1497 aa21.25■□□□□ 0.99
AP1S3-206ENST00000443700 CDK13Q14004 1512 aaKnown RBP21.25■□□□□ 0.99
AP1S3-206ENST00000443700 CHIC2Q9UKJ5 165 aa21.23■□□□□ 0.99
AP1S3-206ENST00000443700 DAPK1P53355 1430 aa21.23■□□□□ 0.99
AP1S3-206ENST00000443700 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
AP1S3-206ENST00000443700 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
AP1S3-206ENST00000443700 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.99
AP1S3-206ENST00000443700 ERICH6Q7L0X2 663 aa21.2■□□□□ 0.98
AP1S3-206ENST00000443700 ANKRD30BQ9BXX2 1392 aa21.19■□□□□ 0.98
AP1S3-206ENST00000443700 ADGBQ8N7X0 1667 aa21.19■□□□□ 0.98
AP1S3-206ENST00000443700 BCL11AQ9H165 835 aa21.18■□□□□ 0.98
AP1S3-206ENST00000443700 MSH5O43196 834 aa21.17■□□□□ 0.98
AP1S3-206ENST00000443700 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
AP1S3-206ENST00000443700 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
AP1S3-206ENST00000443700 MRS2Q9HD23 443 aa21.15■□□□□ 0.98
AP1S3-206ENST00000443700 SPATA31E1Q6ZUB1 1445 aa21.15■□□□□ 0.98
AP1S3-206ENST00000443700 KIAA0556O60303 1618 aa21.13■□□□□ 0.97
AP1S3-206ENST00000443700 ABCC5O15440 1437 aa21.13■□□□□ 0.97
AP1S3-206ENST00000443700 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
AP1S3-206ENST00000443700 KIF14Q15058 1648 aa21.12■□□□□ 0.97
AP1S3-206ENST00000443700 RAPGEF6Q8TEU7 1601 aa21.12■□□□□ 0.97
AP1S3-206ENST00000443700 CCDC184Q52MB2 194 aa21.1■□□□□ 0.97
AP1S3-206ENST00000443700 FAM9BQ8IZU0 186 aa21.1■□□□□ 0.97
AP1S3-206ENST00000443700 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
AP1S3-206ENST00000443700 KIF7Q2M1P5 1343 aa21.09■□□□□ 0.97
AP1S3-206ENST00000443700 MBD5Q9P267 1494 aa21.09■□□□□ 0.97
AP1S3-206ENST00000443700 C11orf95C9JLR9 678 aaPredicted RBP21.08■□□□□ 0.97
AP1S3-206ENST00000443700 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
AP1S3-206ENST00000443700 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
AP1S3-206ENST00000443700 ADCY10Q96PN6 1610 aa21.04■□□□□ 0.96
AP1S3-206ENST00000443700 PZPP20742 1482 aa21.04■□□□□ 0.96
AP1S3-206ENST00000443700 NUP153P49790 1475 aaKnown RBP21.04■□□□□ 0.96
AP1S3-206ENST00000443700 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
AP1S3-206ENST00000443700 FOXD1Q16676 465 aa21.03■□□□□ 0.96
AP1S3-206ENST00000443700 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
AP1S3-206ENST00000443700 KIAA0586Q9BVV6 1533 aa21.03■□□□□ 0.96
AP1S3-206ENST00000443700 ADGRL2O95490 1459 aa21.02■□□□□ 0.96
AP1S3-206ENST00000443700 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.96
AP1S3-206ENST00000443700 KDM5CP41229 1560 aa21.02■□□□□ 0.95
AP1S3-206ENST00000443700 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
AP1S3-206ENST00000443700 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
AP1S3-206ENST00000443700 KIAA1107Q9UPP5 1409 aa21■□□□□ 0.95
AP1S3-206ENST00000443700 BCORL1Q5H9F3 1711 aa20.99■□□□□ 0.95
AP1S3-206ENST00000443700 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
AP1S3-206ENST00000443700 DHX29Q7Z478 1369 aaKnown RBP20.98■□□□□ 0.95
AP1S3-206ENST00000443700 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
AP1S3-206ENST00000443700 USP47Q96K76 1375 aa20.96■□□□□ 0.95
AP1S3-206ENST00000443700 B4GALNT3Q6L9W6 998 aa20.96■□□□□ 0.95
AP1S3-206ENST00000443700 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
AP1S3-206ENST00000443700 NUDCQ9Y266 331 aa20.95■□□□□ 0.94
AP1S3-206ENST00000443700 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
AP1S3-206ENST00000443700 RALGAPBQ86X10 1494 aa20.94■□□□□ 0.94
AP1S3-206ENST00000443700 UHRF1BP1Q6BDS2 1440 aa20.93■□□□□ 0.94
AP1S3-206ENST00000443700 RNF123Q5XPI4 1314 aa20.92■□□□□ 0.94
AP1S3-206ENST00000443700 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
AP1S3-206ENST00000443700 ZNF644Q9H582 1327 aaPredicted RBP20.89■□□□□ 0.93
AP1S3-206ENST00000443700 ANKRD30AQ9BXX3 1397 aa20.89■□□□□ 0.93
AP1S3-206ENST00000443700 GRIN2AQ12879 1464 aa20.89■□□□□ 0.93
AP1S3-206ENST00000443700 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.93
AP1S3-206ENST00000443700 KTN1Q86UP2 1357 aaKnown RBP20.88■□□□□ 0.93
AP1S3-206ENST00000443700 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
AP1S3-206ENST00000443700 GPATCH8Q9UKJ3 1502 aaKnown RBP20.88■□□□□ 0.93
AP1S3-206ENST00000443700 E9PCH4 1651 aa20.87■□□□□ 0.93
AP1S3-206ENST00000443700 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
AP1S3-206ENST00000443700 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
AP1S3-206ENST00000443700 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
AP1S3-206ENST00000443700 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
AP1S3-206ENST00000443700 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
AP1S3-206ENST00000443700 EIF4G3O43432 1585 aaKnown RBP20.83■□□□□ 0.93
AP1S3-206ENST00000443700 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
AP1S3-206ENST00000443700 ANKRD50Q9ULJ7 1429 aa20.82■□□□□ 0.92
AP1S3-206ENST00000443700 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
AP1S3-206ENST00000443700 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
AP1S3-206ENST00000443700 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-206ENST00000443700 PKD2Q13563 968 aa20.8■□□□□ 0.92
AP1S3-206ENST00000443700 ANP32AP39687 249 aaKnown RBP20.79■□□□□ 0.92
AP1S3-206ENST00000443700 LRPPRCP42704 1394 aaKnown RBP20.78■□□□□ 0.92
AP1S3-206ENST00000443700 TMC1Q8TDI8 760 aa20.77■□□□□ 0.92
AP1S3-206ENST00000443700 PNISRQ8TF01 805 aaKnown RBP20.77■□□□□ 0.92
AP1S3-206ENST00000443700 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
AP1S3-206ENST00000443700 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
AP1S3-206ENST00000443700 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
AP1S3-206ENST00000443700 MYBBP1AQ9BQG0 1328 aaKnown RBP20.75■□□□□ 0.91
AP1S3-206ENST00000443700 RALBP1Q15311 655 aa20.74■□□□□ 0.91
AP1S3-206ENST00000443700 C9orf84Q5VXU9 1444 aa20.74■□□□□ 0.91
AP1S3-206ENST00000443700 CARMIL2Q6F5E8 1435 aa20.74■□□□□ 0.91
AP1S3-206ENST00000443700 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
AP1S3-206ENST00000443700 ARHGEF5Q12774 1597 aa20.74■□□□□ 0.91
AP1S3-206ENST00000443700 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
AP1S3-206ENST00000443700 PTPRGP23470 1445 aa20.71■□□□□ 0.91
AP1S3-206ENST00000443700 DEKP35659 375 aaKnown RBP20.7■□□□□ 0.9
AP1S3-206ENST00000443700 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
AP1S3-206ENST00000443700 NUP155O75694 1391 aa20.7■□□□□ 0.9
AP1S3-206ENST00000443700 ABCC10Q5T3U5 1492 aa20.7■□□□□ 0.9
AP1S3-206ENST00000443700 TRPM1Q7Z4N2 1603 aa20.7■□□□□ 0.9
AP1S3-206ENST00000443700 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
AP1S3-206ENST00000443700 ZNF777Q9ULD5 760 aaPredicted RBP20.69■□□□□ 0.9
AP1S3-206ENST00000443700 LAMC1P11047 1609 aa20.69■□□□□ 0.9
AP1S3-206ENST00000443700 ABCA8O94911 1581 aa20.68■□□□□ 0.9
AP1S3-206ENST00000443700 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms