RNA–Protein interactions for RNA: ENST00000443353.5

PDK1-208, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 2

Gene PDK1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-208ENST00000443353 TROQ12816 1431 aaPredicted RBP17.1■□□□□ 0.33
PDK1-208ENST00000443353 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
PDK1-208ENST00000443353 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.32
PDK1-208ENST00000443353 MAGI2Q86UL8 1455 aa17.08■□□□□ 0.32
PDK1-208ENST00000443353 LMTK3Q96Q04 1460 aa17.08■□□□□ 0.32
PDK1-208ENST00000443353 MLECQ14165 292 aa17.07■□□□□ 0.32
PDK1-208ENST00000443353 CDK11AQ9UQ88 783 aaPredicted RBP17.07■□□□□ 0.32
PDK1-208ENST00000443353 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
PDK1-208ENST00000443353 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
PDK1-208ENST00000443353 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
PDK1-208ENST00000443353 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
PDK1-208ENST00000443353 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
PDK1-208ENST00000443353 ATP10AO60312 1499 aa17.03■□□□□ 0.32
PDK1-208ENST00000443353 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
PDK1-208ENST00000443353 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
PDK1-208ENST00000443353 HSPA2P54652 639 aa17.02■□□□□ 0.32
PDK1-208ENST00000443353 CLIP1P30622 1438 aa17.01■□□□□ 0.31
PDK1-208ENST00000443353 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
PDK1-208ENST00000443353 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
PDK1-208ENST00000443353 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
PDK1-208ENST00000443353 KDM5CP41229 1560 aa16.98■□□□□ 0.31
PDK1-208ENST00000443353 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
PDK1-208ENST00000443353 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
PDK1-208ENST00000443353 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
PDK1-208ENST00000443353 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.3
PDK1-208ENST00000443353 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
PDK1-208ENST00000443353 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
PDK1-208ENST00000443353 ABCC1P33527 1531 aa16.93■□□□□ 0.3
PDK1-208ENST00000443353 MLH3Q9UHC1 1453 aa16.93■□□□□ 0.3
PDK1-208ENST00000443353 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
PDK1-208ENST00000443353 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
PDK1-208ENST00000443353 FER1L4A9Z1Z3 1794 aa16.92■□□□□ 0.3
PDK1-208ENST00000443353 FBXO41Q8TF61 875 aa16.91■□□□□ 0.3
PDK1-208ENST00000443353 MYT1LQ9UL68 1186 aa16.91■□□□□ 0.3
PDK1-208ENST00000443353 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
PDK1-208ENST00000443353 REREQ9P2R6 1566 aa16.88■□□□□ 0.29
PDK1-208ENST00000443353 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
PDK1-208ENST00000443353 ITSN2Q9NZM3 1697 aa16.87■□□□□ 0.29
PDK1-208ENST00000443353 SAMD9LQ8IVG5 1584 aa16.86■□□□□ 0.29
PDK1-208ENST00000443353 CDC42BPAQ5VT25 1732 aa16.86■□□□□ 0.29
PDK1-208ENST00000443353 HNRNPMP52272 730 aaKnown RBP eCLIP16.85■□□□□ 0.29
PDK1-208ENST00000443353 AGLP35573 1532 aa16.84■□□□□ 0.29
PDK1-208ENST00000443353 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
PDK1-208ENST00000443353 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.28
PDK1-208ENST00000443353 ZNF644Q9H582 1327 aaPredicted RBP16.8■□□□□ 0.28
PDK1-208ENST00000443353 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
PDK1-208ENST00000443353 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
PDK1-208ENST00000443353 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
PDK1-208ENST00000443353 UHRF1BP1Q6BDS2 1440 aa16.78■□□□□ 0.28
PDK1-208ENST00000443353 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
PDK1-208ENST00000443353 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
PDK1-208ENST00000443353 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
PDK1-208ENST00000443353 CERKQ8TCT0 537 aa16.77■□□□□ 0.28
PDK1-208ENST00000443353 C3P01024 1663 aa16.76■□□□□ 0.27
PDK1-208ENST00000443353 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
PDK1-208ENST00000443353 STRCQ7RTU9 1775 aa16.74■□□□□ 0.27
PDK1-208ENST00000443353 ATP7AQ04656 1500 aa16.74■□□□□ 0.27
PDK1-208ENST00000443353 TIAM1Q13009 1591 aa16.73■□□□□ 0.27
PDK1-208ENST00000443353 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
PDK1-208ENST00000443353 ESF1Q9H501 851 aaKnown RBP16.73■□□□□ 0.27
PDK1-208ENST00000443353 MBD5Q9P267 1494 aa16.73■□□□□ 0.27
PDK1-208ENST00000443353 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
PDK1-208ENST00000443353 PLXNC1O60486 1568 aa16.72■□□□□ 0.27
PDK1-208ENST00000443353 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
PDK1-208ENST00000443353 A2MP01023 1474 aa16.71■□□□□ 0.27
PDK1-208ENST00000443353 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
PDK1-208ENST00000443353 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
PDK1-208ENST00000443353 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
PDK1-208ENST00000443353 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
PDK1-208ENST00000443353 GGT6Q6P531 493 aa16.67■□□□□ 0.26
PDK1-208ENST00000443353 NPATQ14207 1427 aa16.66■□□□□ 0.26
PDK1-208ENST00000443353 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
PDK1-208ENST00000443353 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
PDK1-208ENST00000443353 PTPRTO14522 1441 aa16.65■□□□□ 0.26
PDK1-208ENST00000443353 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
PDK1-208ENST00000443353 PTPRKQ15262 1439 aa16.64■□□□□ 0.25
PDK1-208ENST00000443353 MROH2AA6NES4 1674 aa16.63■□□□□ 0.25
PDK1-208ENST00000443353 CLTCQ00610 1675 aaKnown RBP16.63■□□□□ 0.25
PDK1-208ENST00000443353 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
PDK1-208ENST00000443353 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
PDK1-208ENST00000443353 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
PDK1-208ENST00000443353 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
PDK1-208ENST00000443353 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
PDK1-208ENST00000443353 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
PDK1-208ENST00000443353 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
PDK1-208ENST00000443353 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
PDK1-208ENST00000443353 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.24
PDK1-208ENST00000443353 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
PDK1-208ENST00000443353 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
PDK1-208ENST00000443353 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
PDK1-208ENST00000443353 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
PDK1-208ENST00000443353 LRRC9Q6ZRR7 1453 aa16.56■□□□□ 0.24
PDK1-208ENST00000443353 KIF3BO15066 747 aa16.56■□□□□ 0.24
PDK1-208ENST00000443353 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
PDK1-208ENST00000443353 ZNF335Q9H4Z2 1342 aaPredicted RBP16.54■□□□□ 0.24
PDK1-208ENST00000443353 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
PDK1-208ENST00000443353 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
PDK1-208ENST00000443353 RSPH4AQ5TD94 716 aa16.52■□□□□ 0.24
PDK1-208ENST00000443353 PLA2R1Q13018 1463 aa16.52■□□□□ 0.23
PDK1-208ENST00000443353 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms