RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 CDC42BPBQ9Y5S2 1711 aa29.85■■■□□ 2.37
FAM3A-214ENST00000442929 ARHGAP5Q13017 1502 aa29.83■■■□□ 2.37
FAM3A-214ENST00000442929 CCNB3Q8WWL7 1395 aa29.78■■■□□ 2.36
FAM3A-214ENST00000442929 NCOA2Q15596 1464 aa29.76■■■□□ 2.35
FAM3A-214ENST00000442929 EFCAB2Q5VUJ9 269 aa29.74■■■□□ 2.35
FAM3A-214ENST00000442929 AKNAQ7Z591 1439 aa29.73■■■□□ 2.35
FAM3A-214ENST00000442929 GPATCH8Q9UKJ3 1502 aaKnown RBP29.71■■■□□ 2.35
FAM3A-214ENST00000442929 ADGRL1O94910 1474 aa29.69■■■□□ 2.34
FAM3A-214ENST00000442929 RICTORQ6R327 1708 aa29.66■■■□□ 2.34
FAM3A-214ENST00000442929 KANK4Q5T7N3 995 aaPredicted RBP29.66■■■□□ 2.34
FAM3A-214ENST00000442929 DENND4BO75064 1496 aaPredicted RBP29.65■■■□□ 2.34
FAM3A-214ENST00000442929 PLEKHH2Q8IVE3 1493 aa29.64■■■□□ 2.34
FAM3A-214ENST00000442929 ILDR1Q86SU0 546 aaPredicted RBP29.64■■■□□ 2.34
FAM3A-214ENST00000442929 ABCC1P33527 1531 aa29.64■■■□□ 2.34
FAM3A-214ENST00000442929 CFDP1Q9UEE9 299 aaPredicted RBP29.63■■■□□ 2.33
FAM3A-214ENST00000442929 SAMD9LQ8IVG5 1584 aa29.62■■■□□ 2.33
FAM3A-214ENST00000442929 COL17A1Q9UMD9 1497 aaPredicted RBP29.61■■■□□ 2.33
FAM3A-214ENST00000442929 SCAPERQ9BY12 1400 aa29.59■■■□□ 2.33
FAM3A-214ENST00000442929 FRMPD1Q5SYB0 1578 aa29.59■■■□□ 2.33
FAM3A-214ENST00000442929 MYOM3Q5VTT5 1437 aa29.58■■■□□ 2.33
FAM3A-214ENST00000442929 ZNF518AQ6AHZ1 1483 aa29.57■■■□□ 2.32
FAM3A-214ENST00000442929 POGZQ7Z3K3 1410 aa29.56■■■□□ 2.32
FAM3A-214ENST00000442929 ZMYM4Q5VZL5 1548 aa29.55■■■□□ 2.32
FAM3A-214ENST00000442929 ZNF777Q9ULD5 760 aaPredicted RBP29.54■■■□□ 2.32
FAM3A-214ENST00000442929 SYCP2Q9BX26 1530 aa29.54■■■□□ 2.32
FAM3A-214ENST00000442929 MIA2Q96PC5 1412 aa29.54■■■□□ 2.32
FAM3A-214ENST00000442929 KIAA1107Q9UPP5 1409 aa29.52■■■□□ 2.32
FAM3A-214ENST00000442929 CAMSAP2Q08AD1 1489 aa29.5■■■□□ 2.31
FAM3A-214ENST00000442929 KDM5CP41229 1560 aa29.5■■■□□ 2.31
FAM3A-214ENST00000442929 MAGI2Q86UL8 1455 aa29.48■■■□□ 2.31
FAM3A-214ENST00000442929 RAPGEF3O95398 923 aa29.48■■■□□ 2.31
FAM3A-214ENST00000442929 HECW2Q9P2P5 1572 aa29.47■■■□□ 2.31
FAM3A-214ENST00000442929 KDM4FA0A1W2PPD8 638 aa29.47■■■□□ 2.31
FAM3A-214ENST00000442929 ARHGEF40Q8TER5 1519 aa29.45■■■□□ 2.31
FAM3A-214ENST00000442929 PTPN23Q9H3S7 1636 aa29.45■■■□□ 2.31
FAM3A-214ENST00000442929 ZFYVE16Q7Z3T8 1539 aa29.43■■■□□ 2.3
FAM3A-214ENST00000442929 ARHGEF12Q9NZN5 1544 aa29.43■■■□□ 2.3
FAM3A-214ENST00000442929 ARHGEF5Q12774 1597 aa29.43■■■□□ 2.3
FAM3A-214ENST00000442929 FGD6Q6ZV73 1430 aa29.42■■■□□ 2.3
FAM3A-214ENST00000442929 TRAPPC8Q9Y2L5 1435 aa29.38■■■□□ 2.29
FAM3A-214ENST00000442929 CCDC141Q6ZP82 1450 aa29.38■■■□□ 2.29
FAM3A-214ENST00000442929 RSPH4AQ5TD94 716 aa29.37■■■□□ 2.29
FAM3A-214ENST00000442929 MLH3Q9UHC1 1453 aa29.36■■■□□ 2.29
FAM3A-214ENST00000442929 TCOF1Q13428 1488 aaKnown RBP29.36■■■□□ 2.29
FAM3A-214ENST00000442929 ZNF644Q9H582 1327 aaPredicted RBP29.35■■■□□ 2.29
FAM3A-214ENST00000442929 MBD5Q9P267 1494 aa29.35■■■□□ 2.29
FAM3A-214ENST00000442929 INO80Q9ULG1 1556 aaPredicted RBP29.35■■■□□ 2.29
FAM3A-214ENST00000442929 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.29
FAM3A-214ENST00000442929 AFAP1Q8N556 730 aa29.33■■■□□ 2.29
FAM3A-214ENST00000442929 MYT1LQ9UL68 1186 aa29.33■■■□□ 2.29
FAM3A-214ENST00000442929 ATP7AQ04656 1500 aa29.33■■■□□ 2.29
FAM3A-214ENST00000442929 CROCC2H7BZ55 1655 aa29.33■■■□□ 2.29
FAM3A-214ENST00000442929 KIDINS220Q9ULH0 1771 aa29.33■■■□□ 2.29
FAM3A-214ENST00000442929 SPAG9O60271 1321 aaKnown RBP29.29■■■□□ 2.28
FAM3A-214ENST00000442929 DNMT1P26358 1616 aaKnown RBP29.29■■■□□ 2.28
FAM3A-214ENST00000442929 ABCA6Q8N139 1617 aa29.29■■■□□ 2.28
FAM3A-214ENST00000442929 DIP2CQ9Y2E4 1556 aa29.28■■■□□ 2.28
FAM3A-214ENST00000442929 ADGBQ8N7X0 1667 aa29.28■■■□□ 2.28
FAM3A-214ENST00000442929 PPARGC1BQ86YN6 1023 aaKnown RBP29.27■■■□□ 2.28
FAM3A-214ENST00000442929 MAST1Q9Y2H9 1570 aa29.26■■■□□ 2.28
FAM3A-214ENST00000442929 RTEL1-TNFRSF6BF6WH68 1400 aa29.26■■■□□ 2.27
FAM3A-214ENST00000442929 YEATS2Q9ULM3 1422 aa29.26■■■□□ 2.27
FAM3A-214ENST00000442929 REREQ9P2R6 1566 aa29.26■■■□□ 2.27
FAM3A-214ENST00000442929 ATP10AO60312 1499 aa29.25■■■□□ 2.27
FAM3A-214ENST00000442929 C9orf84Q5VXU9 1444 aa29.25■■■□□ 2.27
FAM3A-214ENST00000442929 TSPY4P0CV99 314 aa29.23■■■□□ 2.27
FAM3A-214ENST00000442929 TSPY10P0CW01 314 aa29.23■■■□□ 2.27
FAM3A-214ENST00000442929 SHANK2Q9UPX8 1470 aa29.23■■■□□ 2.27
FAM3A-214ENST00000442929 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
FAM3A-214ENST00000442929 FAM50AQ14320 339 aaKnown RBP29.18■■■□□ 2.26
FAM3A-214ENST00000442929 DAPK1P53355 1430 aa29.18■■■□□ 2.26
FAM3A-214ENST00000442929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.17■■■□□ 2.26
FAM3A-214ENST00000442929 RRBP1Q9P2E9 1410 aaKnown RBP29.14■■■□□ 2.26
FAM3A-214ENST00000442929 BCORL1Q5H9F3 1711 aa29.13■■■□□ 2.25
FAM3A-214ENST00000442929 ARID4BQ4LE39 1312 aaPredicted RBP29.12■■■□□ 2.25
FAM3A-214ENST00000442929 ABCC5O15440 1437 aa29.11■■■□□ 2.25
FAM3A-214ENST00000442929 AGLP35573 1532 aa29.11■■■□□ 2.25
FAM3A-214ENST00000442929 A2MP01023 1474 aa29.1■■■□□ 2.25
FAM3A-214ENST00000442929 SIGLEC1Q9BZZ2 1709 aa29.09■■■□□ 2.25
FAM3A-214ENST00000442929 EIF2AK4Q9P2K8 1649 aaKnown RBP29.03■■■□□ 2.24
FAM3A-214ENST00000442929 DUOX2Q9NRD8 1548 aa29.03■■■□□ 2.24
FAM3A-214ENST00000442929 ANKRD30AQ9BXX3 1397 aa29.02■■■□□ 2.24
FAM3A-214ENST00000442929 FER1L4A9Z1Z3 1794 aa29.02■■■□□ 2.24
FAM3A-214ENST00000442929 ADGRL2O95490 1459 aa29.02■■■□□ 2.24
FAM3A-214ENST00000442929 ADAMTSL3P82987 1691 aa29.02■■■□□ 2.24
FAM3A-214ENST00000442929 DHX29Q7Z478 1369 aaKnown RBP29■■■□□ 2.23
FAM3A-214ENST00000442929 KIF15Q9NS87 1388 aa28.97■■■□□ 2.23
FAM3A-214ENST00000442929 MADDQ8WXG6 1647 aa28.95■■■□□ 2.23
FAM3A-214ENST00000442929 ERBINQ96RT1 1412 aa28.94■■■□□ 2.22
FAM3A-214ENST00000442929 NCOA1Q15788 1441 aa28.93■■■□□ 2.22
FAM3A-214ENST00000442929 RIMS1Q86UR5 1692 aaKnown RBP28.93■■■□□ 2.22
FAM3A-214ENST00000442929 ROCK1Q13464 1354 aa28.92■■■□□ 2.22
FAM3A-214ENST00000442929 CHIC2Q9UKJ5 165 aa28.92■■■□□ 2.22
FAM3A-214ENST00000442929 RNF17Q9BXT8 1623 aaKnown RBP28.91■■■□□ 2.22
FAM3A-214ENST00000442929 FAM135AQ9P2D6 1515 aa28.9■■■□□ 2.22
FAM3A-214ENST00000442929 ITGAEP38570 1179 aa28.88■■■□□ 2.21
FAM3A-214ENST00000442929 MLECQ14165 292 aa28.87■■■□□ 2.21
FAM3A-214ENST00000442929 RRP7BPQ9NSQ0 103 aa28.87■■■□□ 2.21
FAM3A-214ENST00000442929 MROH2AA6NES4 1674 aa28.86■■■□□ 2.21
FAM3A-214ENST00000442929 ESF1Q9H501 851 aaKnown RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms