RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 EIF5BO60841 1220 aaKnown RBP8.42□□□□□ -1.06
CNOT1-202ENST00000441024 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
CNOT1-202ENST00000441024 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
CNOT1-202ENST00000441024 RAD54L2Q9Y4B4 1467 aa8.41□□□□□ -1.06
CNOT1-202ENST00000441024 IGF1RP08069 1367 aa8.41□□□□□ -1.06
CNOT1-202ENST00000441024 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-202ENST00000441024 DISP1Q96F81 1524 aa8.4□□□□□ -1.07
CNOT1-202ENST00000441024 TMF1P82094 1093 aa8.4□□□□□ -1.07
CNOT1-202ENST00000441024 KIAA0556O60303 1618 aa8.39□□□□□ -1.07
CNOT1-202ENST00000441024 NUDCQ9Y266 331 aa8.39□□□□□ -1.07
CNOT1-202ENST00000441024 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
CNOT1-202ENST00000441024 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
CNOT1-202ENST00000441024 MAGI1Q96QZ7 1491 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-202ENST00000441024 EFCAB5A4FU69 1503 aa8.38□□□□□ -1.07
CNOT1-202ENST00000441024 TDRD9Q8NDG6 1382 aaKnown RBP8.38□□□□□ -1.07
CNOT1-202ENST00000441024 ANKRD30AQ9BXX3 1397 aa8.38□□□□□ -1.07
CNOT1-202ENST00000441024 KDM5BQ9UGL1 1544 aa8.38□□□□□ -1.07
CNOT1-202ENST00000441024 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
CNOT1-202ENST00000441024 AQRO60306 1485 aaKnown RBP eCLIP8.37□□□□□ -1.077e-7■■■■□ 21.1
CNOT1-202ENST00000441024 BECN1Q14457 450 aa8.37□□□□□ -1.07
CNOT1-202ENST00000441024 PNNQ9H307 717 aaKnown RBP8.37□□□□□ -1.07
CNOT1-202ENST00000441024 CCDC18Q5T9S5 1454 aa8.37□□□□□ -1.07
CNOT1-202ENST00000441024 MS4A1P11836 297 aa8.37□□□□□ -1.07
CNOT1-202ENST00000441024 CHMP4BQ9H444 224 aaKnown RBP8.37□□□□□ -1.07
CNOT1-202ENST00000441024 ABCA8O94911 1581 aa8.37□□□□□ -1.07
CNOT1-202ENST00000441024 CROCC2H7BZ55 1655 aa8.37□□□□□ -1.07
CNOT1-202ENST00000441024 HDGFP51858 240 aaKnown RBP8.36□□□□□ -1.07
CNOT1-202ENST00000441024 IRX6P78412 446 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-202ENST00000441024 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
CNOT1-202ENST00000441024 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
CNOT1-202ENST00000441024 PLPPR3Q6T4P5 718 aa8.35□□□□□ -1.07
CNOT1-202ENST00000441024 ANP32EQ9BTT0 268 aa8.35□□□□□ -1.07
CNOT1-202ENST00000441024 ERICH6BQ5W0A0 696 aa8.35□□□□□ -1.07
CNOT1-202ENST00000441024 SUPT16HQ9Y5B9 1047 aaKnown RBP8.35□□□□□ -1.07
CNOT1-202ENST00000441024 HSPA5P11021 654 aaKnown RBP8.34□□□□□ -1.07
CNOT1-202ENST00000441024 EFCAB2Q5VUJ9 269 aa8.34□□□□□ -1.07
CNOT1-202ENST00000441024 MPHOSPH9Q99550 1183 aa8.34□□□□□ -1.07
CNOT1-202ENST00000441024 MAGI3Q5TCQ9 1506 aa8.34□□□□□ -1.07
CNOT1-202ENST00000441024 MAPK8IP3Q9UPT6 1336 aa8.34□□□□□ -1.07
CNOT1-202ENST00000441024 PKD2Q13563 968 aa8.34□□□□□ -1.07
CNOT1-202ENST00000441024 POGKQ9P215 609 aa8.34□□□□□ -1.07
CNOT1-202ENST00000441024 FHOD3Q2V2M9 1422 aa8.33□□□□□ -1.08
CNOT1-202ENST00000441024 GRIN2BQ13224 1484 aa8.33□□□□□ -1.08
CNOT1-202ENST00000441024 PCF11O94913 1555 aaKnown RBP8.32□□□□□ -1.08
CNOT1-202ENST00000441024 PPRC1Q5VV67 1664 aaKnown RBP8.32□□□□□ -1.08
CNOT1-202ENST00000441024 ARID4BQ4LE39 1312 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-202ENST00000441024 BCORL1Q5H9F3 1711 aa8.32□□□□□ -1.08
CNOT1-202ENST00000441024 RALBP1Q15311 655 aa8.32□□□□□ -1.08
CNOT1-202ENST00000441024 NUP155O75694 1391 aa8.31□□□□□ -1.08
CNOT1-202ENST00000441024 KTN1Q86UP2 1357 aaKnown RBP8.31□□□□□ -1.08
CNOT1-202ENST00000441024 FTSJ3Q8IY81 847 aaKnown RBP8.3□□□□□ -1.08
CNOT1-202ENST00000441024 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
CNOT1-202ENST00000441024 GAPVD1Q14C86 1478 aa8.3□□□□□ -1.08
CNOT1-202ENST00000441024 ROCK2O75116 1388 aaKnown RBP8.3□□□□□ -1.08
CNOT1-202ENST00000441024 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-202ENST00000441024 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
CNOT1-202ENST00000441024 EIF3AQ14152 1382 aaKnown RBP8.29□□□□□ -1.08
CNOT1-202ENST00000441024 CDC42BPAQ5VT25 1732 aa8.29□□□□□ -1.08
CNOT1-202ENST00000441024 CC2D1BQ5T0F9 858 aaKnown RBP8.29□□□□□ -1.08
CNOT1-202ENST00000441024 SYNJ2O15056 1496 aa8.28□□□□□ -1.08
CNOT1-202ENST00000441024 C14orf37Q86TY3 774 aa8.28□□□□□ -1.08
CNOT1-202ENST00000441024 ERCC6L2Q5T890 1561 aa8.28□□□□□ -1.08
CNOT1-202ENST00000441024 GOLGA6L22H0YM25 854 aa8.28□□□□□ -1.08
CNOT1-202ENST00000441024 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-202ENST00000441024 DHX57Q6P158 1386 aaKnown RBP8.27□□□□□ -1.09
CNOT1-202ENST00000441024 NBR1Q14596 966 aa8.27□□□□□ -1.09
CNOT1-202ENST00000441024 CDC42BPBQ9Y5S2 1711 aa8.27□□□□□ -1.09
CNOT1-202ENST00000441024 MORC1Q86VD1 984 aa8.27□□□□□ -1.09
CNOT1-202ENST00000441024 JPH4Q96JJ6 628 aa8.27□□□□□ -1.09
CNOT1-202ENST00000441024 TIAM1Q13009 1591 aa8.26□□□□□ -1.09
CNOT1-202ENST00000441024 NCLP19338 710 aaKnown RBP8.26□□□□□ -1.09
CNOT1-202ENST00000441024 CFAP44Q96MT7 982 aa8.25□□□□□ -1.09
CNOT1-202ENST00000441024 HDGFL2Q7Z4V5 671 aaPredicted RBP8.24□□□□□ -1.09
CNOT1-202ENST00000441024 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
CNOT1-202ENST00000441024 L3MBTL2Q969R5 705 aa8.24□□□□□ -1.09
CNOT1-202ENST00000441024 PHLDB1Q86UU1 1377 aa8.24□□□□□ -1.09
CNOT1-202ENST00000441024 SPAG9O60271 1321 aaKnown RBP8.23□□□□□ -1.09
CNOT1-202ENST00000441024 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
CNOT1-202ENST00000441024 U2SURPO15042 1029 aaKnown RBP8.23□□□□□ -1.09
CNOT1-202ENST00000441024 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
CNOT1-202ENST00000441024 CALD1Q05682 793 aaKnown RBP8.23□□□□□ -1.09
CNOT1-202ENST00000441024 KIF13AQ9H1H9 1805 aa8.23□□□□□ -1.09
CNOT1-202ENST00000441024 FOXD1Q16676 465 aa8.23□□□□□ -1.09
CNOT1-202ENST00000441024 RAPGEF6Q8TEU7 1601 aa8.22□□□□□ -1.09
CNOT1-202ENST00000441024 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
CNOT1-202ENST00000441024 UACAQ9BZF9 1416 aa8.22□□□□□ -1.09
CNOT1-202ENST00000441024 GGT6Q6P531 493 aa8.22□□□□□ -1.09
CNOT1-202ENST00000441024 HNRNPMP52272 730 aaKnown RBP eCLIP8.22□□□□□ -1.094e-6■■□□□ 11.9
CNOT1-202ENST00000441024 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.09
CNOT1-202ENST00000441024 FRAT1Q92837 279 aaPredicted RBP8.21□□□□□ -1.09
CNOT1-202ENST00000441024 LAS1LQ9Y4W2 734 aaKnown RBP8.21□□□□□ -1.09
CNOT1-202ENST00000441024 PTPRGP23470 1445 aa8.21□□□□□ -1.09
CNOT1-202ENST00000441024 MYOM3Q5VTT5 1437 aa8.21□□□□□ -1.09
CNOT1-202ENST00000441024 KIAA0586Q9BVV6 1533 aa8.21□□□□□ -1.1
CNOT1-202ENST00000441024 IPO8O15397 1037 aaKnown RBP8.21□□□□□ -1.1
CNOT1-202ENST00000441024 SENP3Q9H4L4 574 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-202ENST00000441024 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
CNOT1-202ENST00000441024 CASKIN1Q8WXD9 1431 aa8.2□□□□□ -1.1
CNOT1-202ENST00000441024 KIF15Q9NS87 1388 aa8.2□□□□□ -1.1
CNOT1-202ENST00000441024 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms