RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 KCTD12Q96CX2 325 aaKnown RBP9.48□□□□□ -0.89
LINC01549-201ENST00000440664 GSE1Q14687 1217 aa9.47□□□□□ -0.89
LINC01549-201ENST00000440664 MICALL2Q8IY33 904 aa9.46□□□□□ -0.9
LINC01549-201ENST00000440664 A0A0G2JS52 829 aa9.43□□□□□ -0.9
LINC01549-201ENST00000440664 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
LINC01549-201ENST00000440664 NUDT7P0C024 238 aa9.4□□□□□ -0.9
LINC01549-201ENST00000440664 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
LINC01549-201ENST00000440664 PTPN5P54829 565 aa9.38□□□□□ -0.91
LINC01549-201ENST00000440664 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
LINC01549-201ENST00000440664 LHX6Q9UPM6 363 aa9.37□□□□□ -0.91
LINC01549-201ENST00000440664 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
LINC01549-201ENST00000440664 HRO43593 1189 aa9.34□□□□□ -0.91
LINC01549-201ENST00000440664 TK2O00142 265 aa9.33□□□□□ -0.92
LINC01549-201ENST00000440664 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
LINC01549-201ENST00000440664 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
LINC01549-201ENST00000440664 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
LINC01549-201ENST00000440664 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
LINC01549-201ENST00000440664 PSEN2P49810 448 aa9.24□□□□□ -0.93
LINC01549-201ENST00000440664 LCE2BO14633 110 aa9.22□□□□□ -0.93
LINC01549-201ENST00000440664 LAPTM4AQ15012 233 aa9.22□□□□□ -0.93
LINC01549-201ENST00000440664 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.94
LINC01549-201ENST00000440664 PCDHGA4Q9Y5G9 962 aa9.21□□□□□ -0.94
LINC01549-201ENST00000440664 FKBP8Q14318 412 aa9.2□□□□□ -0.94
LINC01549-201ENST00000440664 THSD4Q6ZMP0 1018 aa9.16□□□□□ -0.94
LINC01549-201ENST00000440664 MS4A4AQ96JQ5 239 aa9.16□□□□□ -0.94
LINC01549-201ENST00000440664 SOX12O15370 315 aa9.13□□□□□ -0.95
LINC01549-201ENST00000440664 GFRA3O60609 400 aa9.12□□□□□ -0.95
LINC01549-201ENST00000440664 ZNF787Q6DD87 383 aa9.12□□□□□ -0.95
LINC01549-201ENST00000440664 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
LINC01549-201ENST00000440664 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
LINC01549-201ENST00000440664 CIZ1Q9ULV3 898 aaPredicted RBP9.11□□□□□ -0.95
LINC01549-201ENST00000440664 GOLGA8CPA6NN73 597 aa9.1□□□□□ -0.95
LINC01549-201ENST00000440664 SLC34A2O95436 690 aa9.1□□□□□ -0.95
LINC01549-201ENST00000440664 PHF8Q9UPP1 1060 aa9.1□□□□□ -0.95
LINC01549-201ENST00000440664 C2orf72A6NCS6 295 aa9.09□□□□□ -0.95
LINC01549-201ENST00000440664 KCNK17Q96T54 332 aa9.08□□□□□ -0.96
LINC01549-201ENST00000440664 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
LINC01549-201ENST00000440664 WNT2BQ93097 391 aa9.07□□□□□ -0.96
LINC01549-201ENST00000440664 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
LINC01549-201ENST00000440664 KIF3CO14782 793 aa9.05□□□□□ -0.96
LINC01549-201ENST00000440664 FBXO3Q9UK99 471 aa9.05□□□□□ -0.96
LINC01549-201ENST00000440664 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
LINC01549-201ENST00000440664 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
LINC01549-201ENST00000440664 NRG2O14511 850 aaPredicted RBP8.97□□□□□ -0.97
LINC01549-201ENST00000440664 VASPP50552 380 aaPredicted RBP8.97□□□□□ -0.97
LINC01549-201ENST00000440664 KDM4FA0A1W2PPD8 638 aa8.95□□□□□ -0.98
LINC01549-201ENST00000440664 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
LINC01549-201ENST00000440664 NLRP6P59044 892 aa8.94□□□□□ -0.98
LINC01549-201ENST00000440664 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
LINC01549-201ENST00000440664 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
LINC01549-201ENST00000440664 SLC4A5Q9BY07 1137 aa8.91□□□□□ -0.98
LINC01549-201ENST00000440664 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
LINC01549-201ENST00000440664 KCNC4Q03721 635 aa8.9□□□□□ -0.98
LINC01549-201ENST00000440664 SPOCK2Q92563 424 aa8.89□□□□□ -0.99
LINC01549-201ENST00000440664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
LINC01549-201ENST00000440664 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
LINC01549-201ENST00000440664 NBPF3Q9H094 633 aa8.88□□□□□ -0.99
LINC01549-201ENST00000440664 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
LINC01549-201ENST00000440664 PTCD2Q8WV60 388 aaKnown RBP8.86□□□□□ -0.99
LINC01549-201ENST00000440664 ANKK1Q8NFD2 765 aa8.84□□□□□ -0.99
LINC01549-201ENST00000440664 PRKD2Q9BZL6 878 aa8.84□□□□□ -0.99
LINC01549-201ENST00000440664 TRIM41Q8WV44 630 aa8.83□□□□□ -1
LINC01549-201ENST00000440664 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
LINC01549-201ENST00000440664 BCL2L12Q9HB09 334 aa8.81□□□□□ -1
LINC01549-201ENST00000440664 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
LINC01549-201ENST00000440664 TBC1D12O60347 775 aa8.8□□□□□ -1
LINC01549-201ENST00000440664 PTPREP23469 700 aa8.79□□□□□ -1
LINC01549-201ENST00000440664 BCAMP50895 628 aa8.79□□□□□ -1
LINC01549-201ENST00000440664 NYAP1Q6ZVC0 841 aa8.79□□□□□ -1
LINC01549-201ENST00000440664 ZNF454Q8N9F8 522 aa8.79□□□□□ -1
LINC01549-201ENST00000440664 VGFO15240 615 aaPredicted RBP8.78□□□□□ -1
LINC01549-201ENST00000440664 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
LINC01549-201ENST00000440664 TREML4Q6UXN2 200 aa8.74□□□□□ -1.01
LINC01549-201ENST00000440664 IFNLR1Q8IU57 520 aaPredicted RBP8.74□□□□□ -1.01
LINC01549-201ENST00000440664 MFRPQ9BY79 579 aa8.73□□□□□ -1.01
LINC01549-201ENST00000440664 WBP1LQ9NX94 342 aa8.73□□□□□ -1.01
LINC01549-201ENST00000440664 STK17AQ9UEE5 414 aa8.73□□□□□ -1.01
LINC01549-201ENST00000440664 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
LINC01549-201ENST00000440664 SOWAHBA6NEL2 793 aa8.71□□□□□ -1.02
LINC01549-201ENST00000440664 PLPP6Q8IY26 295 aa8.7□□□□□ -1.02
LINC01549-201ENST00000440664 RNF25Q96BH1 459 aaPredicted RBP8.7□□□□□ -1.02
LINC01549-201ENST00000440664 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
LINC01549-201ENST00000440664 POTECB2RU33 542 aa8.68□□□□□ -1.02
LINC01549-201ENST00000440664 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
LINC01549-201ENST00000440664 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
LINC01549-201ENST00000440664 FOXK1P85037 733 aa8.64□□□□□ -1.03
LINC01549-201ENST00000440664 STK24Q9Y6E0 443 aa8.64□□□□□ -1.03
LINC01549-201ENST00000440664 FOSBP53539 338 aa8.63□□□□□ -1.03
LINC01549-201ENST00000440664 PKDCCQ504Y2 493 aa8.62□□□□□ -1.03
LINC01549-201ENST00000440664 ZFRQ96KR1 1074 aaKnown RBP8.62□□□□□ -1.03
LINC01549-201ENST00000440664 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
LINC01549-201ENST00000440664 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
LINC01549-201ENST00000440664 INSM1Q01101 510 aaPredicted RBP8.59□□□□□ -1.03
LINC01549-201ENST00000440664 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
LINC01549-201ENST00000440664 UPF1Q92900 1129 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC01549-201ENST00000440664 MYT1Q01538 1121 aa8.58□□□□□ -1.04
LINC01549-201ENST00000440664 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
LINC01549-201ENST00000440664 TSR3Q9UJK0 312 aaKnown RBP8.58□□□□□ -1.04
LINC01549-201ENST00000440664 DSG2Q14126 1118 aa8.57□□□□□ -1.04
LINC01549-201ENST00000440664 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms