RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
CHD6-204ENST00000440647 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
CHD6-204ENST00000440647 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
CHD6-204ENST00000440647 EMP3P54852 163 aa12.28□□□□□ -0.44
CHD6-204ENST00000440647 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
CHD6-204ENST00000440647 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
CHD6-204ENST00000440647 ZNF710Q8N1W2 664 aa12.28□□□□□ -0.44
CHD6-204ENST00000440647 NKX1-1Q15270 411 aaPredicted RBP12.27□□□□□ -0.45
CHD6-204ENST00000440647 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
CHD6-204ENST00000440647 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
CHD6-204ENST00000440647 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
CHD6-204ENST00000440647 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
CHD6-204ENST00000440647 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
CHD6-204ENST00000440647 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
CHD6-204ENST00000440647 PPP1R37O75864 691 aa12.18□□□□□ -0.46
CHD6-204ENST00000440647 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
CHD6-204ENST00000440647 HOXB1P14653 301 aaPredicted RBP12.17□□□□□ -0.46
CHD6-204ENST00000440647 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
CHD6-204ENST00000440647 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
CHD6-204ENST00000440647 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
CHD6-204ENST00000440647 TMEM92Q6UXU6 159 aa12.12□□□□□ -0.47
CHD6-204ENST00000440647 BICRAQ9NZM4 1560 aa12.11□□□□□ -0.47
CHD6-204ENST00000440647 ERBB3P21860 1342 aa12.11□□□□□ -0.47
CHD6-204ENST00000440647 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
CHD6-204ENST00000440647 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
CHD6-204ENST00000440647 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
CHD6-204ENST00000440647 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
CHD6-204ENST00000440647 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
CHD6-204ENST00000440647 POTEBQ6S5H4 581 aa12.04□□□□□ -0.48
CHD6-204ENST00000440647 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
CHD6-204ENST00000440647 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
CHD6-204ENST00000440647 GPR153Q6NV75 609 aa12.01□□□□□ -0.49
CHD6-204ENST00000440647 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
CHD6-204ENST00000440647 KIF3CO14782 793 aa11.99□□□□□ -0.49
CHD6-204ENST00000440647 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
CHD6-204ENST00000440647 SCRIBQ14160 1630 aa11.99□□□□□ -0.49
CHD6-204ENST00000440647 C2orf72A6NCS6 295 aa11.98□□□□□ -0.49
CHD6-204ENST00000440647 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
CHD6-204ENST00000440647 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
CHD6-204ENST00000440647 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
CHD6-204ENST00000440647 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
CHD6-204ENST00000440647 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
CHD6-204ENST00000440647 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
CHD6-204ENST00000440647 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
CHD6-204ENST00000440647 GPHNQ9NQX3 736 aaPredicted RBP11.93□□□□□ -0.5
CHD6-204ENST00000440647 SLC34A2O95436 690 aa11.92□□□□□ -0.5
CHD6-204ENST00000440647 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
CHD6-204ENST00000440647 PDE4AP27815 886 aa11.89□□□□□ -0.51
CHD6-204ENST00000440647 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
CHD6-204ENST00000440647 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
CHD6-204ENST00000440647 FOXK1P85037 733 aa11.88□□□□□ -0.51
CHD6-204ENST00000440647 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
CHD6-204ENST00000440647 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
CHD6-204ENST00000440647 EIF4G1Q04637 1599 aaKnown RBP11.85□□□□□ -0.51
CHD6-204ENST00000440647 DSG2Q14126 1118 aa11.85□□□□□ -0.51
CHD6-204ENST00000440647 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
CHD6-204ENST00000440647 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
CHD6-204ENST00000440647 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
CHD6-204ENST00000440647 KHSRPQ92945 711 aaKnown RBP eCLIP11.84□□□□□ -0.516e-7■■■□□ 17.9
CHD6-204ENST00000440647 NUDT7P0C024 238 aa11.82□□□□□ -0.52
CHD6-204ENST00000440647 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
CHD6-204ENST00000440647 PTGER2P43116 358 aa11.81□□□□□ -0.52
CHD6-204ENST00000440647 PSDA5PKW4 1024 aaPredicted RBP11.8□□□□□ -0.52
CHD6-204ENST00000440647 TBC1D12O60347 775 aa11.8□□□□□ -0.52
CHD6-204ENST00000440647 PPP1R15BQ5SWA1 713 aa11.79□□□□□ -0.52
CHD6-204ENST00000440647 PBX2P40425 430 aa11.78□□□□□ -0.52
CHD6-204ENST00000440647 MFSD10Q14728 455 aa11.78□□□□□ -0.52
CHD6-204ENST00000440647 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
CHD6-204ENST00000440647 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
CHD6-204ENST00000440647 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
CHD6-204ENST00000440647 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
CHD6-204ENST00000440647 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
CHD6-204ENST00000440647 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
CHD6-204ENST00000440647 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CHD6-204ENST00000440647 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHD6-204ENST00000440647 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
CHD6-204ENST00000440647 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
CHD6-204ENST00000440647 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
CHD6-204ENST00000440647 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD6-204ENST00000440647 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
CHD6-204ENST00000440647 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
CHD6-204ENST00000440647 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
CHD6-204ENST00000440647 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
CHD6-204ENST00000440647 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
CHD6-204ENST00000440647 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
CHD6-204ENST00000440647 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
CHD6-204ENST00000440647 MAP3K9P80192 1104 aa11.59□□□□□ -0.55
CHD6-204ENST00000440647 E2F4Q16254 413 aa11.57□□□□□ -0.56
CHD6-204ENST00000440647 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
CHD6-204ENST00000440647 TK2O00142 265 aa11.56□□□□□ -0.56
CHD6-204ENST00000440647 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
CHD6-204ENST00000440647 ADGRD1Q6QNK2 874 aa11.55□□□□□ -0.56
CHD6-204ENST00000440647 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
CHD6-204ENST00000440647 EVI5O60447 810 aa11.54□□□□□ -0.56
CHD6-204ENST00000440647 ANO8Q9HCE9 1232 aaPredicted RBP11.54□□□□□ -0.56
CHD6-204ENST00000440647 DPYSL4O14531 572 aa11.51□□□□□ -0.57
CHD6-204ENST00000440647 PSEN2P49810 448 aa11.5□□□□□ -0.57
CHD6-204ENST00000440647 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
CHD6-204ENST00000440647 HCSTQ9UBK5 93 aa11.49□□□□□ -0.57
CHD6-204ENST00000440647 ARIH1Q9Y4X5 557 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms