RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
COL16A1-204ENST00000440437 ZFYVE16Q7Z3T8 1539 aa27.43■■□□□ 1.98
COL16A1-204ENST00000440437 SIGLEC1Q9BZZ2 1709 aa27.42■■□□□ 1.98
COL16A1-204ENST00000440437 CDC42BPBQ9Y5S2 1711 aa27.42■■□□□ 1.98
COL16A1-204ENST00000440437 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
COL16A1-204ENST00000440437 MAGI2Q86UL8 1455 aa27.41■■□□□ 1.98
COL16A1-204ENST00000440437 MADDQ8WXG6 1647 aa27.41■■□□□ 1.98
COL16A1-204ENST00000440437 PREX2Q70Z35 1606 aa27.39■■□□□ 1.98
COL16A1-204ENST00000440437 YEATS2Q9ULM3 1422 aa27.39■■□□□ 1.97
COL16A1-204ENST00000440437 ARHGAP5Q13017 1502 aa27.38■■□□□ 1.97
COL16A1-204ENST00000440437 PTPRMP28827 1452 aa27.37■■□□□ 1.97
COL16A1-204ENST00000440437 EFCAB2Q5VUJ9 269 aa27.36■■□□□ 1.97
COL16A1-204ENST00000440437 CDC42BPAQ5VT25 1732 aa27.34■■□□□ 1.97
COL16A1-204ENST00000440437 KDM5CP41229 1560 aa27.33■■□□□ 1.97
COL16A1-204ENST00000440437 RIMS1Q86UR5 1692 aaKnown RBP27.31■■□□□ 1.96
COL16A1-204ENST00000440437 ARID4BQ4LE39 1312 aaPredicted RBP27.31■■□□□ 1.96
COL16A1-204ENST00000440437 ZNF518AQ6AHZ1 1483 aa27.31■■□□□ 1.96
COL16A1-204ENST00000440437 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
COL16A1-204ENST00000440437 ABCC1P33527 1531 aa27.27■■□□□ 1.96
COL16A1-204ENST00000440437 ATP10AO60312 1499 aa27.24■■□□□ 1.95
COL16A1-204ENST00000440437 FER1L4A9Z1Z3 1794 aa27.23■■□□□ 1.95
COL16A1-204ENST00000440437 C9orf84Q5VXU9 1444 aa27.23■■□□□ 1.95
COL16A1-204ENST00000440437 ARHGEF12Q9NZN5 1544 aa27.21■■□□□ 1.95
COL16A1-204ENST00000440437 DIP2CQ9Y2E4 1556 aa27.21■■□□□ 1.95
COL16A1-204ENST00000440437 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
COL16A1-204ENST00000440437 ABCA6Q8N139 1617 aa27.19■■□□□ 1.94
COL16A1-204ENST00000440437 AFAP1Q8N556 730 aa27.17■■□□□ 1.94
COL16A1-204ENST00000440437 SAMD9LQ8IVG5 1584 aa27.17■■□□□ 1.94
COL16A1-204ENST00000440437 REREQ9P2R6 1566 aa27.17■■□□□ 1.94
COL16A1-204ENST00000440437 MLH3Q9UHC1 1453 aa27.16■■□□□ 1.94
COL16A1-204ENST00000440437 TRAPPC8Q9Y2L5 1435 aa27.16■■□□□ 1.94
COL16A1-204ENST00000440437 GPATCH8Q9UKJ3 1502 aaKnown RBP27.15■■□□□ 1.94
COL16A1-204ENST00000440437 KIDINS220Q9ULH0 1771 aa27.13■■□□□ 1.93
COL16A1-204ENST00000440437 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
COL16A1-204ENST00000440437 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
COL16A1-204ENST00000440437 SYCP2Q9BX26 1530 aa27.1■■□□□ 1.93
COL16A1-204ENST00000440437 MTUS2Q5JR59 1369 aa27.08■■□□□ 1.93
COL16A1-204ENST00000440437 MLECQ14165 292 aa27.07■■□□□ 1.92
COL16A1-204ENST00000440437 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
COL16A1-204ENST00000440437 AGLP35573 1532 aa27.04■■□□□ 1.92
COL16A1-204ENST00000440437 CCNB3Q8WWL7 1395 aa27.02■■□□□ 1.92
COL16A1-204ENST00000440437 MYT1LQ9UL68 1186 aa27.01■■□□□ 1.91
COL16A1-204ENST00000440437 PLEKHH2Q8IVE3 1493 aa27■■□□□ 1.91
COL16A1-204ENST00000440437 KIAA1107Q9UPP5 1409 aa27■■□□□ 1.91
COL16A1-204ENST00000440437 ZNF777Q9ULD5 760 aaPredicted RBP27■■□□□ 1.91
COL16A1-204ENST00000440437 INO80Q9ULG1 1556 aaPredicted RBP27■■□□□ 1.91
COL16A1-204ENST00000440437 ATP7AQ04656 1500 aa26.96■■□□□ 1.91
COL16A1-204ENST00000440437 PREX1Q8TCU6 1659 aa26.96■■□□□ 1.91
COL16A1-204ENST00000440437 CFDP1Q9UEE9 299 aaPredicted RBP26.96■■□□□ 1.91
COL16A1-204ENST00000440437 SUPT6HQ7KZ85 1726 aaKnown RBP26.96■■□□□ 1.91
COL16A1-204ENST00000440437 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
COL16A1-204ENST00000440437 C3P01024 1663 aa26.93■■□□□ 1.9
COL16A1-204ENST00000440437 LOC105371045A0A1W2PR82 267 aa26.93■■□□□ 1.9
COL16A1-204ENST00000440437 HNRNPMP52272 730 aaKnown RBP eCLIP26.93■■□□□ 1.9
COL16A1-204ENST00000440437 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
COL16A1-204ENST00000440437 PLXNC1O60486 1568 aa26.91■■□□□ 1.9
COL16A1-204ENST00000440437 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
COL16A1-204ENST00000440437 NCOA2Q15596 1464 aa26.89■■□□□ 1.9
COL16A1-204ENST00000440437 MBD5Q9P267 1494 aa26.87■■□□□ 1.89
COL16A1-204ENST00000440437 ADGBQ8N7X0 1667 aa26.86■■□□□ 1.89
COL16A1-204ENST00000440437 CEBPAP49715 358 aaPredicted RBP26.86■■□□□ 1.89
COL16A1-204ENST00000440437 ILDR1Q86SU0 546 aaPredicted RBP26.86■■□□□ 1.89
COL16A1-204ENST00000440437 HSPA2P54652 639 aa26.85■■□□□ 1.89
COL16A1-204ENST00000440437 SETD1BQ9UPS6 1966 aaKnown RBP26.85■■□□□ 1.89
COL16A1-204ENST00000440437 MROH2AA6NES4 1674 aa26.85■■□□□ 1.89
COL16A1-204ENST00000440437 ZNF644Q9H582 1327 aaPredicted RBP26.85■■□□□ 1.89
COL16A1-204ENST00000440437 A2MP01023 1474 aa26.82■■□□□ 1.88
COL16A1-204ENST00000440437 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
COL16A1-204ENST00000440437 CNTLNQ9NXG0 1405 aa26.81■■□□□ 1.88
COL16A1-204ENST00000440437 CAMSAP2Q08AD1 1489 aa26.81■■□□□ 1.88
COL16A1-204ENST00000440437 MAP3K1Q13233 1512 aa26.8■■□□□ 1.88
COL16A1-204ENST00000440437 RTEL1-TNFRSF6BF6WH68 1400 aa26.77■■□□□ 1.88
COL16A1-204ENST00000440437 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
COL16A1-204ENST00000440437 CLTCQ00610 1675 aaKnown RBP26.76■■□□□ 1.87
COL16A1-204ENST00000440437 CCDC141Q6ZP82 1450 aa26.75■■□□□ 1.87
COL16A1-204ENST00000440437 ESF1Q9H501 851 aaKnown RBP26.74■■□□□ 1.87
COL16A1-204ENST00000440437 STRCQ7RTU9 1775 aa26.74■■□□□ 1.87
COL16A1-204ENST00000440437 ARHGEF5Q12774 1597 aa26.73■■□□□ 1.87
COL16A1-204ENST00000440437 NPATQ14207 1427 aa26.67■■□□□ 1.86
COL16A1-204ENST00000440437 KANK4Q5T7N3 995 aaPredicted RBP26.66■■□□□ 1.86
COL16A1-204ENST00000440437 ZMYM3Q14202 1370 aa26.65■■□□□ 1.86
COL16A1-204ENST00000440437 DHX29Q7Z478 1369 aaKnown RBP26.64■■□□□ 1.86
COL16A1-204ENST00000440437 RSPH4AQ5TD94 716 aa26.63■■□□□ 1.85
COL16A1-204ENST00000440437 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
COL16A1-204ENST00000440437 ZNF142P52746 1687 aaPredicted RBP26.62■■□□□ 1.85
COL16A1-204ENST00000440437 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
COL16A1-204ENST00000440437 MYO3AQ8NEV4 1616 aa26.61■■□□□ 1.85
COL16A1-204ENST00000440437 GGT6Q6P531 493 aa26.6■■□□□ 1.85
COL16A1-204ENST00000440437 MIA2Q96PC5 1412 aa26.59■■□□□ 1.85
COL16A1-204ENST00000440437 FBXO41Q8TF61 875 aa26.59■■□□□ 1.85
COL16A1-204ENST00000440437 PPP6R1Q9UPN7 881 aa26.58■■□□□ 1.85
COL16A1-204ENST00000440437 FAM135AQ9P2D6 1515 aa26.58■■□□□ 1.85
COL16A1-204ENST00000440437 PTPRKQ15262 1439 aa26.57■■□□□ 1.84
COL16A1-204ENST00000440437 KDM5DQ9BY66 1539 aa26.54■■□□□ 1.84
COL16A1-204ENST00000440437 NCOA1Q15788 1441 aa26.53■■□□□ 1.84
COL16A1-204ENST00000440437 CROCC2H7BZ55 1655 aa26.52■■□□□ 1.84
COL16A1-204ENST00000440437 CAMSAP1Q5T5Y3 1602 aa26.52■■□□□ 1.84
COL16A1-204ENST00000440437 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
COL16A1-204ENST00000440437 RNF17Q9BXT8 1623 aaKnown RBP26.51■■□□□ 1.83
COL16A1-204ENST00000440437 TSPY4P0CV99 314 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms