RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
PDGFB-203ENST00000440375 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
PDGFB-203ENST00000440375 BCORL1Q5H9F3 1711 aa19.43■□□□□ 0.7
PDGFB-203ENST00000440375 ZFYVE16Q7Z3T8 1539 aa19.43■□□□□ 0.7
PDGFB-203ENST00000440375 SIGLEC1Q9BZZ2 1709 aa19.42■□□□□ 0.7
PDGFB-203ENST00000440375 ARHGAP5Q13017 1502 aa19.42■□□□□ 0.7
PDGFB-203ENST00000440375 MADDQ8WXG6 1647 aa19.4■□□□□ 0.7
PDGFB-203ENST00000440375 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
PDGFB-203ENST00000440375 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
PDGFB-203ENST00000440375 PTPRMP28827 1452 aa19.39■□□□□ 0.69
PDGFB-203ENST00000440375 PREX2Q70Z35 1606 aa19.38■□□□□ 0.69
PDGFB-203ENST00000440375 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
PDGFB-203ENST00000440375 CDC42BPBQ9Y5S2 1711 aa19.37■□□□□ 0.69
PDGFB-203ENST00000440375 KDM5CP41229 1560 aa19.34■□□□□ 0.69
PDGFB-203ENST00000440375 ZNF518AQ6AHZ1 1483 aa19.34■□□□□ 0.69
PDGFB-203ENST00000440375 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
PDGFB-203ENST00000440375 ABCC1P33527 1531 aa19.33■□□□□ 0.68
PDGFB-203ENST00000440375 ARHGEF12Q9NZN5 1544 aa19.32■□□□□ 0.68
PDGFB-203ENST00000440375 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
PDGFB-203ENST00000440375 RIMS1Q86UR5 1692 aaKnown RBP19.32■□□□□ 0.68
PDGFB-203ENST00000440375 AFAP1Q8N556 730 aa19.31■□□□□ 0.68
PDGFB-203ENST00000440375 ATP10AO60312 1499 aa19.29■□□□□ 0.68
PDGFB-203ENST00000440375 C9orf84Q5VXU9 1444 aa19.29■□□□□ 0.68
PDGFB-203ENST00000440375 TRAPPC8Q9Y2L5 1435 aa19.29■□□□□ 0.68
PDGFB-203ENST00000440375 ITSN2Q9NZM3 1697 aa19.28■□□□□ 0.68
PDGFB-203ENST00000440375 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.67
PDGFB-203ENST00000440375 GPATCH8Q9UKJ3 1502 aaKnown RBP19.26■□□□□ 0.67
PDGFB-203ENST00000440375 MLECQ14165 292 aa19.26■□□□□ 0.67
PDGFB-203ENST00000440375 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
PDGFB-203ENST00000440375 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
PDGFB-203ENST00000440375 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
PDGFB-203ENST00000440375 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
PDGFB-203ENST00000440375 MTUS2Q5JR59 1369 aa19.22■□□□□ 0.67
PDGFB-203ENST00000440375 SYCP2Q9BX26 1530 aa19.22■□□□□ 0.67
PDGFB-203ENST00000440375 LOC105371045A0A1W2PR82 267 aa19.21■□□□□ 0.67
PDGFB-203ENST00000440375 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
PDGFB-203ENST00000440375 EHBP1L1Q8N3D4 1523 aa19.2■□□□□ 0.66
PDGFB-203ENST00000440375 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
PDGFB-203ENST00000440375 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
PDGFB-203ENST00000440375 REREQ9P2R6 1566 aa19.19■□□□□ 0.66
PDGFB-203ENST00000440375 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
PDGFB-203ENST00000440375 KIDINS220Q9ULH0 1771 aa19.19■□□□□ 0.66
PDGFB-203ENST00000440375 TIAM1Q13009 1591 aa19.19■□□□□ 0.66
PDGFB-203ENST00000440375 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
PDGFB-203ENST00000440375 HNRNPMP52272 730 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDGFB-203ENST00000440375 CFDP1Q9UEE9 299 aaPredicted RBP19.14■□□□□ 0.65
PDGFB-203ENST00000440375 KIAA1107Q9UPP5 1409 aa19.13■□□□□ 0.65
PDGFB-203ENST00000440375 AGLP35573 1532 aa19.13■□□□□ 0.65
PDGFB-203ENST00000440375 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
PDGFB-203ENST00000440375 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
PDGFB-203ENST00000440375 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
PDGFB-203ENST00000440375 ZNF644Q9H582 1327 aaPredicted RBP19.11■□□□□ 0.65
PDGFB-203ENST00000440375 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
PDGFB-203ENST00000440375 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
PDGFB-203ENST00000440375 SPAG9O60271 1321 aaKnown RBP19.09■□□□□ 0.65
PDGFB-203ENST00000440375 HSPA2P54652 639 aa19.09■□□□□ 0.65
PDGFB-203ENST00000440375 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
PDGFB-203ENST00000440375 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
PDGFB-203ENST00000440375 MBD5Q9P267 1494 aa19.06■□□□□ 0.64
PDGFB-203ENST00000440375 ILDR1Q86SU0 546 aaPredicted RBP19.06■□□□□ 0.64
PDGFB-203ENST00000440375 PLXNC1O60486 1568 aa19.05■□□□□ 0.64
PDGFB-203ENST00000440375 C3P01024 1663 aa19.03■□□□□ 0.64
PDGFB-203ENST00000440375 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
PDGFB-203ENST00000440375 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
PDGFB-203ENST00000440375 A2MP01023 1474 aa19.02■□□□□ 0.63
PDGFB-203ENST00000440375 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.63
PDGFB-203ENST00000440375 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
PDGFB-203ENST00000440375 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
PDGFB-203ENST00000440375 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
PDGFB-203ENST00000440375 ADGBQ8N7X0 1667 aa18.96■□□□□ 0.63
PDGFB-203ENST00000440375 ESF1Q9H501 851 aaKnown RBP18.96■□□□□ 0.63
PDGFB-203ENST00000440375 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
PDGFB-203ENST00000440375 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
PDGFB-203ENST00000440375 RTEL1-TNFRSF6BF6WH68 1400 aa18.94■□□□□ 0.62
PDGFB-203ENST00000440375 MROH2AA6NES4 1674 aa18.94■□□□□ 0.62
PDGFB-203ENST00000440375 CLTCQ00610 1675 aaKnown RBP18.92■□□□□ 0.62
PDGFB-203ENST00000440375 ARHGEF5Q12774 1597 aa18.92■□□□□ 0.62
PDGFB-203ENST00000440375 ZMYM3Q14202 1370 aa18.9■□□□□ 0.62
PDGFB-203ENST00000440375 GGT6Q6P531 493 aa18.89■□□□□ 0.61
PDGFB-203ENST00000440375 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
PDGFB-203ENST00000440375 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
PDGFB-203ENST00000440375 NPATQ14207 1427 aa18.88■□□□□ 0.61
PDGFB-203ENST00000440375 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
PDGFB-203ENST00000440375 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
PDGFB-203ENST00000440375 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
PDGFB-203ENST00000440375 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
PDGFB-203ENST00000440375 MIA2Q96PC5 1412 aa18.83■□□□□ 0.61
PDGFB-203ENST00000440375 MYO3AQ8NEV4 1616 aa18.83■□□□□ 0.61
PDGFB-203ENST00000440375 MAST1Q9Y2H9 1570 aa18.82■□□□□ 0.6
PDGFB-203ENST00000440375 KIF3BO15066 747 aa18.82■□□□□ 0.6
PDGFB-203ENST00000440375 FBXO41Q8TF61 875 aa18.82■□□□□ 0.6
PDGFB-203ENST00000440375 NCOA1Q15788 1441 aa18.81■□□□□ 0.6
PDGFB-203ENST00000440375 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
PDGFB-203ENST00000440375 TSPY4P0CV99 314 aa18.79■□□□□ 0.6
PDGFB-203ENST00000440375 TSPY10P0CW01 314 aa18.79■□□□□ 0.6
PDGFB-203ENST00000440375 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
PDGFB-203ENST00000440375 ZNF142P52746 1687 aaPredicted RBP18.79■□□□□ 0.6
PDGFB-203ENST00000440375 CAMSAP1Q5T5Y3 1602 aa18.78■□□□□ 0.6
PDGFB-203ENST00000440375 CEP170BQ9Y4F5 1589 aaPredicted RBP18.77■□□□□ 0.6
PDGFB-203ENST00000440375 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms