RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 CARMIL2Q6F5E8 1435 aa12.23□□□□□ -0.45
COPS3-203ENST00000439936 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
COPS3-203ENST00000439936 UGGT2Q9NYU1 1516 aa12.22□□□□□ -0.45
COPS3-203ENST00000439936 DISP1Q96F81 1524 aa12.21□□□□□ -0.45
COPS3-203ENST00000439936 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
COPS3-203ENST00000439936 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
COPS3-203ENST00000439936 TNIKQ9UKE5 1360 aa12.2□□□□□ -0.46
COPS3-203ENST00000439936 PTPRGP23470 1445 aa12.2□□□□□ -0.46
COPS3-203ENST00000439936 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
COPS3-203ENST00000439936 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
COPS3-203ENST00000439936 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
COPS3-203ENST00000439936 KIAA0556O60303 1618 aa12.15□□□□□ -0.46
COPS3-203ENST00000439936 LOC105371045A0A1W2PR82 267 aa12.14□□□□□ -0.47
COPS3-203ENST00000439936 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
COPS3-203ENST00000439936 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
COPS3-203ENST00000439936 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
COPS3-203ENST00000439936 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
COPS3-203ENST00000439936 ADCY10Q96PN6 1610 aa12.09□□□□□ -0.47
COPS3-203ENST00000439936 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
COPS3-203ENST00000439936 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
COPS3-203ENST00000439936 C7P10643 843 aa12.07□□□□□ -0.48
COPS3-203ENST00000439936 UHRF1BP1LA0JNW5 1464 aa12.06□□□□□ -0.48
COPS3-203ENST00000439936 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
COPS3-203ENST00000439936 FHOD3Q2V2M9 1422 aa12.06□□□□□ -0.48
COPS3-203ENST00000439936 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
COPS3-203ENST00000439936 ABCC2Q92887 1545 aa12.04□□□□□ -0.48
COPS3-203ENST00000439936 ARHGAP35Q9NRY4 1499 aa12.04□□□□□ -0.48
COPS3-203ENST00000439936 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
COPS3-203ENST00000439936 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
COPS3-203ENST00000439936 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
COPS3-203ENST00000439936 ABCA8O94911 1581 aa12.03□□□□□ -0.48
COPS3-203ENST00000439936 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
COPS3-203ENST00000439936 MIER1Q8N108 512 aa12.03□□□□□ -0.48
COPS3-203ENST00000439936 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
COPS3-203ENST00000439936 KDM5BQ9UGL1 1544 aa12.02□□□□□ -0.49
COPS3-203ENST00000439936 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
COPS3-203ENST00000439936 POTEMA6NI47 508 aa12□□□□□ -0.49
COPS3-203ENST00000439936 PCDH10Q9P2E7 1040 aa12□□□□□ -0.49
COPS3-203ENST00000439936 CLIP1P30622 1438 aa12□□□□□ -0.49
COPS3-203ENST00000439936 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
COPS3-203ENST00000439936 MAPKBP1O60336 1514 aa11.99□□□□□ -0.49
COPS3-203ENST00000439936 ATP10BO94823 1461 aa11.98□□□□□ -0.49
COPS3-203ENST00000439936 RAPGEF6Q8TEU7 1601 aa11.98□□□□□ -0.49
COPS3-203ENST00000439936 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
COPS3-203ENST00000439936 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
COPS3-203ENST00000439936 ATP1B4Q9UN42 357 aaPredicted RBP11.98□□□□□ -0.49
COPS3-203ENST00000439936 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
COPS3-203ENST00000439936 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
COPS3-203ENST00000439936 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
COPS3-203ENST00000439936 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
COPS3-203ENST00000439936 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
COPS3-203ENST00000439936 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
COPS3-203ENST00000439936 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
COPS3-203ENST00000439936 KIF13AQ9H1H9 1805 aa11.95□□□□□ -0.5
COPS3-203ENST00000439936 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
COPS3-203ENST00000439936 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
COPS3-203ENST00000439936 NUP153P49790 1475 aaKnown RBP11.94□□□□□ -0.5
COPS3-203ENST00000439936 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
COPS3-203ENST00000439936 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
COPS3-203ENST00000439936 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
COPS3-203ENST00000439936 PLEKHD1A6NEE1 506 aa11.92□□□□□ -0.5
COPS3-203ENST00000439936 DIP2BQ9P265 1576 aa11.91□□□□□ -0.5
COPS3-203ENST00000439936 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
COPS3-203ENST00000439936 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
COPS3-203ENST00000439936 EPRSP07814 1512 aaKnown RBP11.89□□□□□ -0.51
COPS3-203ENST00000439936 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
COPS3-203ENST00000439936 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
COPS3-203ENST00000439936 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
COPS3-203ENST00000439936 GLI2P10070 1586 aa11.88□□□□□ -0.51
COPS3-203ENST00000439936 CDK13Q14004 1512 aaKnown RBP11.87□□□□□ -0.51
COPS3-203ENST00000439936 LRRIQ1Q96JM4 1722 aa11.86□□□□□ -0.51
COPS3-203ENST00000439936 TIE1P35590 1138 aa11.86□□□□□ -0.51
COPS3-203ENST00000439936 NUBP1P53384 320 aa11.86□□□□□ -0.51
COPS3-203ENST00000439936 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
COPS3-203ENST00000439936 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
COPS3-203ENST00000439936 POTEJP0CG39 1038 aa11.85□□□□□ -0.51
COPS3-203ENST00000439936 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
COPS3-203ENST00000439936 PCF11O94913 1555 aaKnown RBP11.85□□□□□ -0.51
COPS3-203ENST00000439936 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
COPS3-203ENST00000439936 FYCO1Q9BQS8 1478 aa11.82□□□□□ -0.52
COPS3-203ENST00000439936 MAP3K4Q9Y6R4 1608 aa11.82□□□□□ -0.52
COPS3-203ENST00000439936 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
COPS3-203ENST00000439936 PPRC1Q5VV67 1664 aaKnown RBP11.8□□□□□ -0.52
COPS3-203ENST00000439936 CCDC18Q5T9S5 1454 aa11.8□□□□□ -0.52
COPS3-203ENST00000439936 VPS8Q8N3P4 1428 aa11.8□□□□□ -0.52
COPS3-203ENST00000439936 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
COPS3-203ENST00000439936 CFAP43Q8NDM7 1665 aa11.79□□□□□ -0.52
COPS3-203ENST00000439936 ABCA9Q8IUA7 1624 aa11.79□□□□□ -0.52
COPS3-203ENST00000439936 MAP3K13O43283 966 aa11.79□□□□□ -0.52
COPS3-203ENST00000439936 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
COPS3-203ENST00000439936 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
COPS3-203ENST00000439936 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
COPS3-203ENST00000439936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.77□□□□□ -0.53
COPS3-203ENST00000439936 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
COPS3-203ENST00000439936 SEC24BO95487 1268 aa11.75□□□□□ -0.53
COPS3-203ENST00000439936 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
COPS3-203ENST00000439936 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
COPS3-203ENST00000439936 TEX14Q8IWB6 1497 aa11.74□□□□□ -0.53
COPS3-203ENST00000439936 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
COPS3-203ENST00000439936 IER5LQ5T953 404 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms