RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 LRRC9Q6ZRR7 1453 aa30.64■■■□□ 2.5
SEMA3B-206ENST00000439487 EFCAB2Q5VUJ9 269 aa30.64■■■□□ 2.5
SEMA3B-206ENST00000439487 SUPT6HQ7KZ85 1726 aaKnown RBP30.64■■■□□ 2.5
SEMA3B-206ENST00000439487 APLP2Q06481 763 aa30.63■■■□□ 2.49
SEMA3B-206ENST00000439487 KANK4Q5T7N3 995 aaPredicted RBP30.62■■■□□ 2.49
SEMA3B-206ENST00000439487 GPATCH8Q9UKJ3 1502 aaKnown RBP30.59■■■□□ 2.49
SEMA3B-206ENST00000439487 CCNB3Q8WWL7 1395 aa30.59■■■□□ 2.49
SEMA3B-206ENST00000439487 RAPGEF3O95398 923 aa30.58■■■□□ 2.49
SEMA3B-206ENST00000439487 ADGRL1O94910 1474 aa30.57■■■□□ 2.48
SEMA3B-206ENST00000439487 RICTORQ6R327 1708 aa30.56■■■□□ 2.48
SEMA3B-206ENST00000439487 NCOA2Q15596 1464 aa30.56■■■□□ 2.48
SEMA3B-206ENST00000439487 FRMPD1Q5SYB0 1578 aa30.55■■■□□ 2.48
SEMA3B-206ENST00000439487 DENND4BO75064 1496 aaPredicted RBP30.55■■■□□ 2.48
SEMA3B-206ENST00000439487 SCAPERQ9BY12 1400 aa30.54■■■□□ 2.48
SEMA3B-206ENST00000439487 ITSN2Q9NZM3 1697 aa30.52■■■□□ 2.48
SEMA3B-206ENST00000439487 CFDP1Q9UEE9 299 aaPredicted RBP30.5■■■□□ 2.47
SEMA3B-206ENST00000439487 ZNF777Q9ULD5 760 aaPredicted RBP30.5■■■□□ 2.47
SEMA3B-206ENST00000439487 SAMD9LQ8IVG5 1584 aa30.47■■■□□ 2.47
SEMA3B-206ENST00000439487 ABCC1P33527 1531 aa30.46■■■□□ 2.47
SEMA3B-206ENST00000439487 POGZQ7Z3K3 1410 aa30.44■■■□□ 2.46
SEMA3B-206ENST00000439487 ARHGEF12Q9NZN5 1544 aa30.42■■■□□ 2.46
SEMA3B-206ENST00000439487 ZMYM4Q5VZL5 1548 aa30.38■■■□□ 2.45
SEMA3B-206ENST00000439487 AFAP1Q8N556 730 aa30.38■■■□□ 2.45
SEMA3B-206ENST00000439487 SYCP2Q9BX26 1530 aa30.37■■■□□ 2.45
SEMA3B-206ENST00000439487 ZNF644Q9H582 1327 aaPredicted RBP30.37■■■□□ 2.45
SEMA3B-206ENST00000439487 TRAPPC8Q9Y2L5 1435 aa30.36■■■□□ 2.45
SEMA3B-206ENST00000439487 ZNF518AQ6AHZ1 1483 aa30.36■■■□□ 2.45
SEMA3B-206ENST00000439487 HNRNPMP52272 730 aaKnown RBP eCLIP30.35■■■□□ 2.45
SEMA3B-206ENST00000439487 PLEKHH2Q8IVE3 1493 aa30.34■■■□□ 2.45
SEMA3B-206ENST00000439487 KDM5CP41229 1560 aa30.32■■■□□ 2.45
SEMA3B-206ENST00000439487 MYOM3Q5VTT5 1437 aa30.31■■■□□ 2.44
SEMA3B-206ENST00000439487 KIAA1107Q9UPP5 1409 aa30.31■■■□□ 2.44
SEMA3B-206ENST00000439487 ZFYVE16Q7Z3T8 1539 aa30.3■■■□□ 2.44
SEMA3B-206ENST00000439487 ARHGEF40Q8TER5 1519 aa30.3■■■□□ 2.44
SEMA3B-206ENST00000439487 CAMSAP2Q08AD1 1489 aa30.29■■■□□ 2.44
SEMA3B-206ENST00000439487 MAGI2Q86UL8 1455 aa30.29■■■□□ 2.44
SEMA3B-206ENST00000439487 YEATS2Q9ULM3 1422 aa30.29■■■□□ 2.44
SEMA3B-206ENST00000439487 ILDR1Q86SU0 546 aaPredicted RBP30.27■■■□□ 2.44
SEMA3B-206ENST00000439487 PPARGC1BQ86YN6 1023 aaKnown RBP30.26■■■□□ 2.43
SEMA3B-206ENST00000439487 HECW2Q9P2P5 1572 aa30.26■■■□□ 2.43
SEMA3B-206ENST00000439487 MYT1LQ9UL68 1186 aa30.26■■■□□ 2.43
SEMA3B-206ENST00000439487 MIA2Q96PC5 1412 aa30.24■■■□□ 2.43
SEMA3B-206ENST00000439487 MBD5Q9P267 1494 aa30.23■■■□□ 2.43
SEMA3B-206ENST00000439487 MLH3Q9UHC1 1453 aa30.22■■■□□ 2.43
SEMA3B-206ENST00000439487 KIDINS220Q9ULH0 1771 aa30.22■■■□□ 2.43
SEMA3B-206ENST00000439487 PTPN23Q9H3S7 1636 aa30.18■■■□□ 2.42
SEMA3B-206ENST00000439487 SPAG9O60271 1321 aaKnown RBP30.18■■■□□ 2.42
SEMA3B-206ENST00000439487 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
SEMA3B-206ENST00000439487 SIGLEC1Q9BZZ2 1709 aa30.17■■■□□ 2.42
SEMA3B-206ENST00000439487 DIP2CQ9Y2E4 1556 aa30.16■■■□□ 2.42
SEMA3B-206ENST00000439487 ATP10AO60312 1499 aa30.16■■■□□ 2.42
SEMA3B-206ENST00000439487 FGD6Q6ZV73 1430 aa30.15■■■□□ 2.42
SEMA3B-206ENST00000439487 KDM4FA0A1W2PPD8 638 aa30.15■■■□□ 2.42
SEMA3B-206ENST00000439487 ARHGEF5Q12774 1597 aa30.14■■■□□ 2.42
SEMA3B-206ENST00000439487 CCDC141Q6ZP82 1450 aa30.13■■■□□ 2.41
SEMA3B-206ENST00000439487 INO80Q9ULG1 1556 aaPredicted RBP30.13■■■□□ 2.41
SEMA3B-206ENST00000439487 ARID4BQ4LE39 1312 aaPredicted RBP30.13■■■□□ 2.41
SEMA3B-206ENST00000439487 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
SEMA3B-206ENST00000439487 RSPH4AQ5TD94 716 aa30.11■■■□□ 2.41
SEMA3B-206ENST00000439487 C9orf84Q5VXU9 1444 aa30.11■■■□□ 2.41
SEMA3B-206ENST00000439487 TCOF1Q13428 1488 aaKnown RBP30.08■■■□□ 2.41
SEMA3B-206ENST00000439487 BCORL1Q5H9F3 1711 aa30.07■■■□□ 2.4
SEMA3B-206ENST00000439487 REREQ9P2R6 1566 aa30.03■■■□□ 2.4
SEMA3B-206ENST00000439487 TSPY4P0CV99 314 aa30.03■■■□□ 2.4
SEMA3B-206ENST00000439487 TSPY10P0CW01 314 aa30.03■■■□□ 2.4
SEMA3B-206ENST00000439487 RTEL1-TNFRSF6BF6WH68 1400 aa30.03■■■□□ 2.4
SEMA3B-206ENST00000439487 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.4
SEMA3B-206ENST00000439487 ADAMTSL3P82987 1691 aa30.01■■■□□ 2.39
SEMA3B-206ENST00000439487 CROCC2H7BZ55 1655 aa30■■■□□ 2.39
SEMA3B-206ENST00000439487 FAM50AQ14320 339 aaKnown RBP29.99■■■□□ 2.39
SEMA3B-206ENST00000439487 DNMT1P26358 1616 aaKnown RBP29.99■■■□□ 2.39
SEMA3B-206ENST00000439487 MAST1Q9Y2H9 1570 aa29.98■■■□□ 2.39
SEMA3B-206ENST00000439487 MLECQ14165 292 aa29.98■■■□□ 2.39
SEMA3B-206ENST00000439487 ABCC5O15440 1437 aa29.97■■■□□ 2.39
SEMA3B-206ENST00000439487 A2MP01023 1474 aa29.95■■■□□ 2.39
SEMA3B-206ENST00000439487 DAPK1P53355 1430 aa29.95■■■□□ 2.38
SEMA3B-206ENST00000439487 AGLP35573 1532 aa29.94■■■□□ 2.38
SEMA3B-206ENST00000439487 MADDQ8WXG6 1647 aa29.93■■■□□ 2.38
SEMA3B-206ENST00000439487 PLXNC1O60486 1568 aa29.92■■■□□ 2.38
SEMA3B-206ENST00000439487 FER1L4A9Z1Z3 1794 aa29.9■■■□□ 2.38
SEMA3B-206ENST00000439487 SHANK2Q9UPX8 1470 aa29.89■■■□□ 2.38
SEMA3B-206ENST00000439487 RIMS1Q86UR5 1692 aaKnown RBP29.88■■■□□ 2.37
SEMA3B-206ENST00000439487 DHX29Q7Z478 1369 aaKnown RBP29.87■■■□□ 2.37
SEMA3B-206ENST00000439487 CHIC2Q9UKJ5 165 aa29.85■■■□□ 2.37
SEMA3B-206ENST00000439487 RRBP1Q9P2E9 1410 aaKnown RBP29.8■■■□□ 2.36
SEMA3B-206ENST00000439487 PTPRMP28827 1452 aa29.79■■■□□ 2.36
SEMA3B-206ENST00000439487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.78■■■□□ 2.36
SEMA3B-206ENST00000439487 RRP7BPQ9NSQ0 103 aa29.78■■■□□ 2.36
SEMA3B-206ENST00000439487 PTPRKQ15262 1439 aa29.77■■■□□ 2.36
SEMA3B-206ENST00000439487 KIF3BO15066 747 aa29.76■■■□□ 2.35
SEMA3B-206ENST00000439487 GGT6Q6P531 493 aa29.76■■■□□ 2.35
SEMA3B-206ENST00000439487 ANKRD30AQ9BXX3 1397 aa29.76■■■□□ 2.35
SEMA3B-206ENST00000439487 KIF15Q9NS87 1388 aa29.76■■■□□ 2.35
SEMA3B-206ENST00000439487 DUOX2Q9NRD8 1548 aa29.76■■■□□ 2.35
SEMA3B-206ENST00000439487 ITGAEP38570 1179 aa29.75■■■□□ 2.35
SEMA3B-206ENST00000439487 ADGRL2O95490 1459 aa29.73■■■□□ 2.35
SEMA3B-206ENST00000439487 NCOA1Q15788 1441 aa29.72■■■□□ 2.35
SEMA3B-206ENST00000439487 PLPPR3Q6T4P5 718 aa29.72■■■□□ 2.35
SEMA3B-206ENST00000439487 EIF2AK4Q9P2K8 1649 aaKnown RBP29.71■■■□□ 2.35
SEMA3B-206ENST00000439487 ESF1Q9H501 851 aaKnown RBP29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms