RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 TPRNQ4KMQ1 711 aa28.42■■■□□ 2.14
SSX2IP-203ENST00000437941 EID1Q9Y6B2 187 aa28.41■■■□□ 2.14
SSX2IP-203ENST00000437941 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
SSX2IP-203ENST00000437941 ANKRD30AQ9BXX3 1397 aa28.41■■■□□ 2.14
SSX2IP-203ENST00000437941 KIF3BO15066 747 aa28.4■■■□□ 2.14
SSX2IP-203ENST00000437941 NAP1L2Q9ULW6 460 aaPredicted RBP28.4■■■□□ 2.14
SSX2IP-203ENST00000437941 NUP155O75694 1391 aa28.39■■■□□ 2.14
SSX2IP-203ENST00000437941 PTMAP06454 111 aaKnown RBP28.36■■■□□ 2.13
SSX2IP-203ENST00000437941 PPP4R2Q9NY27 417 aa28.34■■■□□ 2.13
SSX2IP-203ENST00000437941 VPS8Q8N3P4 1428 aa28.33■■■□□ 2.13
SSX2IP-203ENST00000437941 CCDC9Q9Y3X0 531 aaKnown RBP28.33■■■□□ 2.13
SSX2IP-203ENST00000437941 CALD1Q05682 793 aaKnown RBP28.32■■■□□ 2.12
SSX2IP-203ENST00000437941 FOXD1Q16676 465 aa28.31■■■□□ 2.12
SSX2IP-203ENST00000437941 SPAG9O60271 1321 aaKnown RBP28.31■■■□□ 2.12
SSX2IP-203ENST00000437941 KTN1Q86UP2 1357 aaKnown RBP28.31■■■□□ 2.12
SSX2IP-203ENST00000437941 ROCK2O75116 1388 aaKnown RBP28.3■■■□□ 2.12
SSX2IP-203ENST00000437941 HSPA5P11021 654 aaKnown RBP28.3■■■□□ 2.12
SSX2IP-203ENST00000437941 RSPH4AQ5TD94 716 aa28.3■■■□□ 2.12
SSX2IP-203ENST00000437941 WASHC2CQ9Y4E1 1318 aa28.29■■■□□ 2.12
SSX2IP-203ENST00000437941 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
SSX2IP-203ENST00000437941 HSP90AB1P08238 724 aaKnown RBP28.28■■■□□ 2.12
SSX2IP-203ENST00000437941 GLIPR1L2Q4G1C9 344 aa28.28■■■□□ 2.12
SSX2IP-203ENST00000437941 MPHOSPH9Q99550 1183 aa28.28■■■□□ 2.12
SSX2IP-203ENST00000437941 ZNF330Q9Y3S2 320 aaPredicted RBP28.28■■■□□ 2.12
SSX2IP-203ENST00000437941 CHMP4AQ9BY43 222 aa28.27■■■□□ 2.12
SSX2IP-203ENST00000437941 EIF3AQ14152 1382 aaKnown RBP28.27■■■□□ 2.12
SSX2IP-203ENST00000437941 CADPSQ9ULU8 1353 aa28.27■■■□□ 2.12
SSX2IP-203ENST00000437941 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.12
SSX2IP-203ENST00000437941 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.12
SSX2IP-203ENST00000437941 IPO8O15397 1037 aaKnown RBP28.26■■■□□ 2.11
SSX2IP-203ENST00000437941 HNRNPMP52272 730 aaKnown RBP eCLIP28.26■■■□□ 2.111e-7■■■■□ 19.5
SSX2IP-203ENST00000437941 MCCP23508 829 aa28.24■■■□□ 2.11
SSX2IP-203ENST00000437941 KANK4Q5T7N3 995 aaPredicted RBP28.24■■■□□ 2.11
SSX2IP-203ENST00000437941 TMX4Q9H1E5 349 aaPredicted RBP28.24■■■□□ 2.11
SSX2IP-203ENST00000437941 ISY1Q9ULR0 285 aaKnown RBP28.24■■■□□ 2.11
SSX2IP-203ENST00000437941 JPH4Q96JJ6 628 aa28.23■■■□□ 2.11
SSX2IP-203ENST00000437941 TERF2IPQ9NYB0 399 aa28.23■■■□□ 2.11
SSX2IP-203ENST00000437941 CFAP44Q96MT7 982 aa28.21■■■□□ 2.11
SSX2IP-203ENST00000437941 NGDNQ8NEJ9 315 aaKnown RBP28.21■■■□□ 2.11
SSX2IP-203ENST00000437941 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
SSX2IP-203ENST00000437941 GOLGA6L4A6NEF3 574 aa28.17■■■□□ 2.1
SSX2IP-203ENST00000437941 GOLGA6L6A8MZA4 724 aa28.15■■■□□ 2.1
SSX2IP-203ENST00000437941 PLCB2Q00722 1185 aa28.14■■■□□ 2.1
SSX2IP-203ENST00000437941 RALBP1Q15311 655 aa28.13■■■□□ 2.09
SSX2IP-203ENST00000437941 CCDC18Q5T9S5 1454 aa28.13■■■□□ 2.09
SSX2IP-203ENST00000437941 CCER2I3L3R5 266 aa28.12■■■□□ 2.09
SSX2IP-203ENST00000437941 DNTTIP2Q5QJE6 756 aaKnown RBP28.12■■■□□ 2.09
SSX2IP-203ENST00000437941 STK31Q9BXU1 1019 aa28.12■■■□□ 2.09
SSX2IP-203ENST00000437941 NUTM2DQ5VT03 806 aaPredicted RBP28.12■■■□□ 2.09
SSX2IP-203ENST00000437941 RAPGEF2Q9Y4G8 1499 aa28.12■■■□□ 2.09
SSX2IP-203ENST00000437941 HSCBQ8IWL3 235 aa28.11■■■□□ 2.09
SSX2IP-203ENST00000437941 APBB1O00213 710 aa28.09■■■□□ 2.09
SSX2IP-203ENST00000437941 KIAA1211Q6ZU35 1233 aa28.09■■■□□ 2.09
SSX2IP-203ENST00000437941 NRDCO43847 1150 aa28.08■■■□□ 2.09
SSX2IP-203ENST00000437941 AMPHP49418 695 aa28.07■■■□□ 2.08
SSX2IP-203ENST00000437941 HDAC5Q9UQL6 1122 aa28.06■■■□□ 2.08
SSX2IP-203ENST00000437941 RAB3GAP2Q9H2M9 1393 aa28.06■■■□□ 2.08
SSX2IP-203ENST00000437941 FHOD3Q2V2M9 1422 aa28.05■■■□□ 2.08
SSX2IP-203ENST00000437941 B4GALNT3Q6L9W6 998 aa28.05■■■□□ 2.08
SSX2IP-203ENST00000437941 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
SSX2IP-203ENST00000437941 CLSTN1O94985 981 aa28.03■■■□□ 2.08
SSX2IP-203ENST00000437941 GNL2Q13823 731 aaKnown RBP28.03■■■□□ 2.08
SSX2IP-203ENST00000437941 GORABQ5T7V8 394 aa28.03■■■□□ 2.08
SSX2IP-203ENST00000437941 TAF7LQ5H9L4 462 aa28.02■■■□□ 2.08
SSX2IP-203ENST00000437941 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
SSX2IP-203ENST00000437941 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
SSX2IP-203ENST00000437941 ITPRIPQ8IWB1 547 aa28.01■■■□□ 2.07
SSX2IP-203ENST00000437941 CHMP3Q9Y3E7 222 aa28■■■□□ 2.07
SSX2IP-203ENST00000437941 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
SSX2IP-203ENST00000437941 LMOD3Q0VAK6 560 aa27.98■■■□□ 2.07
SSX2IP-203ENST00000437941 PTPRGP23470 1445 aa27.97■■■□□ 2.07
SSX2IP-203ENST00000437941 LTV1Q96GA3 475 aaPredicted RBP27.97■■■□□ 2.07
SSX2IP-203ENST00000437941 RWDD1Q9H446 243 aaPredicted RBP27.96■■■□□ 2.07
SSX2IP-203ENST00000437941 G3V3G9 751 aa27.96■■■□□ 2.07
SSX2IP-203ENST00000437941 DCAF8Q5TAQ9 597 aa27.96■■■□□ 2.07
SSX2IP-203ENST00000437941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.95■■■□□ 2.06
SSX2IP-203ENST00000437941 TRAK1Q9UPV9 953 aa27.95■■■□□ 2.06
SSX2IP-203ENST00000437941 L3MBTL2Q969R5 705 aa27.92■■■□□ 2.06
SSX2IP-203ENST00000437941 GPATCH3Q96I76 525 aa27.92■■■□□ 2.06
SSX2IP-203ENST00000437941 GTF2E1P29083 439 aaPredicted RBP27.91■■■□□ 2.06
SSX2IP-203ENST00000437941 RCAN3Q9UKA8 241 aa27.9■■■□□ 2.06
SSX2IP-203ENST00000437941 HMMRO75330 724 aa27.9■■■□□ 2.06
SSX2IP-203ENST00000437941 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
SSX2IP-203ENST00000437941 SMC4Q9NTJ3 1288 aa27.89■■■□□ 2.06
SSX2IP-203ENST00000437941 UACAQ9BZF9 1416 aa27.88■■■□□ 2.05
SSX2IP-203ENST00000437941 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
SSX2IP-203ENST00000437941 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
SSX2IP-203ENST00000437941 NOP58Q9Y2X3 529 aaKnown RBP27.86■■■□□ 2.05
SSX2IP-203ENST00000437941 SLC4A10Q6U841 1118 aa27.85■■■□□ 2.05
SSX2IP-203ENST00000437941 CCDC144AA2RUR9 1427 aa27.84■■■□□ 2.05
SSX2IP-203ENST00000437941 ERICH6BQ5W0A0 696 aa27.84■■■□□ 2.05
SSX2IP-203ENST00000437941 EVA1CP58658 441 aa27.83■■■□□ 2.05
SSX2IP-203ENST00000437941 WIZO95785 1651 aa27.82■■■□□ 2.04
SSX2IP-203ENST00000437941 PMFBP1Q8TBY8 1022 aa27.81■■■□□ 2.04
SSX2IP-203ENST00000437941 NLRP13Q86W25 1043 aa27.81■■■□□ 2.04
SSX2IP-203ENST00000437941 SPRYD3Q8NCJ5 442 aa27.79■■■□□ 2.04
SSX2IP-203ENST00000437941 COG3Q96JB2 828 aa27.79■■■□□ 2.04
SSX2IP-203ENST00000437941 FRAT2O75474 233 aaPredicted RBP27.78■■■□□ 2.04
SSX2IP-203ENST00000437941 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
SSX2IP-203ENST00000437941 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms