RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 ABCA9Q8IUA7 1624 aa22.03■■□□□ 1.12
CD4-202ENST00000437800 CDC42BPBQ9Y5S2 1711 aa22.02■■□□□ 1.12
CD4-202ENST00000437800 MIA2Q96PC5 1412 aa21.98■■□□□ 1.11
CD4-202ENST00000437800 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
CD4-202ENST00000437800 DIP2BQ9P265 1576 aa21.97■■□□□ 1.11
CD4-202ENST00000437800 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
CD4-202ENST00000437800 TCOF1Q13428 1488 aaKnown RBP21.95■■□□□ 1.11
CD4-202ENST00000437800 CAMSAP2Q08AD1 1489 aa21.95■■□□□ 1.1
CD4-202ENST00000437800 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
CD4-202ENST00000437800 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
CD4-202ENST00000437800 SAMD9LQ8IVG5 1584 aa21.93■■□□□ 1.1
CD4-202ENST00000437800 ZNF777Q9ULD5 760 aaPredicted RBP21.91■■□□□ 1.1
CD4-202ENST00000437800 PLCH2O75038 1416 aa21.91■■□□□ 1.1
CD4-202ENST00000437800 KIF13AQ9H1H9 1805 aa21.9■■□□□ 1.1
CD4-202ENST00000437800 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
CD4-202ENST00000437800 GLI2P10070 1586 aa21.9■■□□□ 1.1
CD4-202ENST00000437800 ITGAEP38570 1179 aa21.89■■□□□ 1.1
CD4-202ENST00000437800 ARAP3Q8WWN8 1544 aa21.88■■□□□ 1.09
CD4-202ENST00000437800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
CD4-202ENST00000437800 CD109Q6YHK3 1445 aa21.86■■□□□ 1.09
CD4-202ENST00000437800 DNMT1P26358 1616 aaKnown RBP21.85■■□□□ 1.09
CD4-202ENST00000437800 SYCP2Q9BX26 1530 aa21.85■■□□□ 1.09
CD4-202ENST00000437800 FANCAO15360 1455 aa21.84■■□□□ 1.09
CD4-202ENST00000437800 FAM69CQ0P6D2 419 aa21.83■■□□□ 1.09
CD4-202ENST00000437800 TSPOAP1O95153 1857 aa21.83■■□□□ 1.09
CD4-202ENST00000437800 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
CD4-202ENST00000437800 ABCC1P33527 1531 aa21.82■■□□□ 1.08
CD4-202ENST00000437800 PTPRKQ15262 1439 aa21.82■■□□□ 1.08
CD4-202ENST00000437800 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
CD4-202ENST00000437800 DAPK1P53355 1430 aa21.8■■□□□ 1.08
CD4-202ENST00000437800 PPRC1Q5VV67 1664 aaKnown RBP21.8■■□□□ 1.08
CD4-202ENST00000437800 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
CD4-202ENST00000437800 CFAP74Q9C0B2 1584 aa21.79■■□□□ 1.08
CD4-202ENST00000437800 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
CD4-202ENST00000437800 ABCC5O15440 1437 aa21.78■■□□□ 1.08
CD4-202ENST00000437800 CENPBP07199 599 aaPredicted RBP21.77■■□□□ 1.08
CD4-202ENST00000437800 ARHGEF5Q12774 1597 aa21.77■■□□□ 1.08
CD4-202ENST00000437800 GTF3C3Q9Y5Q9 886 aa21.77■■□□□ 1.08
CD4-202ENST00000437800 MBD5Q9P267 1494 aa21.77■■□□□ 1.08
CD4-202ENST00000437800 HNRNPMP52272 730 aaKnown RBP eCLIP21.76■■□□□ 1.07
CD4-202ENST00000437800 PLEKHH2Q8IVE3 1493 aa21.75■■□□□ 1.07
CD4-202ENST00000437800 ADGRL1O94910 1474 aa21.75■■□□□ 1.07
CD4-202ENST00000437800 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
CD4-202ENST00000437800 DIEXFQ68CQ4 756 aaKnown RBP21.73■■□□□ 1.07
CD4-202ENST00000437800 AKNAQ7Z591 1439 aa21.73■■□□□ 1.07
CD4-202ENST00000437800 KIAA1107Q9UPP5 1409 aa21.73■■□□□ 1.07
CD4-202ENST00000437800 ADGBQ8N7X0 1667 aa21.72■■□□□ 1.07
CD4-202ENST00000437800 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
CD4-202ENST00000437800 NEO1Q92859 1461 aa21.7■■□□□ 1.06
CD4-202ENST00000437800 TRAPPC8Q9Y2L5 1435 aa21.7■■□□□ 1.06
CD4-202ENST00000437800 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
CD4-202ENST00000437800 SCAPERQ9BY12 1400 aa21.68■■□□□ 1.06
CD4-202ENST00000437800 C9orf84Q5VXU9 1444 aa21.68■■□□□ 1.06
CD4-202ENST00000437800 TEX14Q8IWB6 1497 aa21.66■■□□□ 1.06
CD4-202ENST00000437800 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
CD4-202ENST00000437800 ZNF316A6NFI3 1004 aaPredicted RBP21.65■■□□□ 1.06
CD4-202ENST00000437800 MAST1Q9Y2H9 1570 aa21.63■■□□□ 1.05
CD4-202ENST00000437800 TRHP20396 242 aaPredicted RBP21.63■■□□□ 1.05
CD4-202ENST00000437800 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
CD4-202ENST00000437800 HFM1A2PYH4 1435 aa21.62■■□□□ 1.05
CD4-202ENST00000437800 POGZQ7Z3K3 1410 aa21.62■■□□□ 1.05
CD4-202ENST00000437800 RRP7BPQ9NSQ0 103 aa21.62■■□□□ 1.05
CD4-202ENST00000437800 ZFYVE16Q7Z3T8 1539 aa21.62■■□□□ 1.05
CD4-202ENST00000437800 NAIPQ13075 1403 aa21.61■■□□□ 1.05
CD4-202ENST00000437800 RICTORQ6R327 1708 aa21.61■■□□□ 1.05
CD4-202ENST00000437800 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
CD4-202ENST00000437800 SETD5Q9C0A6 1442 aa21.61■■□□□ 1.05
CD4-202ENST00000437800 AFAP1Q8N556 730 aa21.61■■□□□ 1.05
CD4-202ENST00000437800 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
CD4-202ENST00000437800 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
CD4-202ENST00000437800 INO80Q9ULG1 1556 aaPredicted RBP21.6■■□□□ 1.05
CD4-202ENST00000437800 ZNF518AQ6AHZ1 1483 aa21.6■■□□□ 1.05
CD4-202ENST00000437800 FRMPD1Q5SYB0 1578 aa21.59■■□□□ 1.05
CD4-202ENST00000437800 KDM6BO15054 1643 aa21.59■■□□□ 1.05
CD4-202ENST00000437800 DHX57Q6P158 1386 aaKnown RBP21.59■■□□□ 1.05
CD4-202ENST00000437800 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
CD4-202ENST00000437800 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
CD4-202ENST00000437800 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
CD4-202ENST00000437800 KDM5CP41229 1560 aa21.59■■□□□ 1.05
CD4-202ENST00000437800 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
CD4-202ENST00000437800 DENND4BO75064 1496 aaPredicted RBP21.58■■□□□ 1.05
CD4-202ENST00000437800 PLXNC1O60486 1568 aa21.58■■□□□ 1.04
CD4-202ENST00000437800 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
CD4-202ENST00000437800 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
CD4-202ENST00000437800 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
CD4-202ENST00000437800 HECW2Q9P2P5 1572 aa21.55■■□□□ 1.04
CD4-202ENST00000437800 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
CD4-202ENST00000437800 KIDINS220Q9ULH0 1771 aa21.55■■□□□ 1.04
CD4-202ENST00000437800 KIF15Q9NS87 1388 aa21.54■■□□□ 1.04
CD4-202ENST00000437800 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
CD4-202ENST00000437800 RTEL1-TNFRSF6BF6WH68 1400 aa21.5■■□□□ 1.03
CD4-202ENST00000437800 ABCA6Q8N139 1617 aa21.49■■□□□ 1.03
CD4-202ENST00000437800 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
CD4-202ENST00000437800 MYT1LQ9UL68 1186 aa21.47■■□□□ 1.03
CD4-202ENST00000437800 MLH3Q9UHC1 1453 aa21.47■■□□□ 1.03
CD4-202ENST00000437800 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
CD4-202ENST00000437800 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
CD4-202ENST00000437800 DIP2CQ9Y2E4 1556 aa21.43■■□□□ 1.02
CD4-202ENST00000437800 YEATS2Q9ULM3 1422 aa21.43■■□□□ 1.02
CD4-202ENST00000437800 ERBINQ96RT1 1412 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms