RNA–Protein interactions for RNA: ENST00000437765.1

YIPF4-202, Transcript of Yip1 domain family member 4, humanhuman

TSL 5

Gene YIPF4, Length 728 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-202ENST00000437765 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
YIPF4-202ENST00000437765 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.76□□□□□ -0.37
YIPF4-202ENST00000437765 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
YIPF4-202ENST00000437765 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
YIPF4-202ENST00000437765 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
YIPF4-202ENST00000437765 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
YIPF4-202ENST00000437765 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
YIPF4-202ENST00000437765 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
YIPF4-202ENST00000437765 MFSD10Q14728 455 aa12.63□□□□□ -0.39
YIPF4-202ENST00000437765 PDE4AP27815 886 aa12.62□□□□□ -0.39
YIPF4-202ENST00000437765 DSG2Q14126 1118 aa12.62□□□□□ -0.39
YIPF4-202ENST00000437765 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
YIPF4-202ENST00000437765 FOXK1P85037 733 aa12.61□□□□□ -0.39
YIPF4-202ENST00000437765 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
YIPF4-202ENST00000437765 HOXB3P14651 431 aaPredicted RBP12.59□□□□□ -0.39
YIPF4-202ENST00000437765 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
YIPF4-202ENST00000437765 PPP1R15BQ5SWA1 713 aa12.56□□□□□ -0.4
YIPF4-202ENST00000437765 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
YIPF4-202ENST00000437765 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
YIPF4-202ENST00000437765 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
YIPF4-202ENST00000437765 CAMK2BQ13554 666 aa12.49□□□□□ -0.41
YIPF4-202ENST00000437765 SLC34A2O95436 690 aa12.47□□□□□ -0.41
YIPF4-202ENST00000437765 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
YIPF4-202ENST00000437765 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
YIPF4-202ENST00000437765 SNPHO15079 494 aa12.43□□□□□ -0.42
YIPF4-202ENST00000437765 ST18O60284 1047 aa12.42□□□□□ -0.42
YIPF4-202ENST00000437765 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
YIPF4-202ENST00000437765 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
YIPF4-202ENST00000437765 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
YIPF4-202ENST00000437765 PTCD2Q8WV60 388 aaKnown RBP12.42□□□□□ -0.42
YIPF4-202ENST00000437765 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
YIPF4-202ENST00000437765 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
YIPF4-202ENST00000437765 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
YIPF4-202ENST00000437765 E2F4Q16254 413 aa12.39□□□□□ -0.43
YIPF4-202ENST00000437765 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■■■□□ 14.6
YIPF4-202ENST00000437765 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
YIPF4-202ENST00000437765 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
YIPF4-202ENST00000437765 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
YIPF4-202ENST00000437765 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
YIPF4-202ENST00000437765 UPF1Q92900 1129 aaKnown RBP eCLIP12.37□□□□□ -0.43
YIPF4-202ENST00000437765 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
YIPF4-202ENST00000437765 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
YIPF4-202ENST00000437765 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
YIPF4-202ENST00000437765 ZNF710Q8N1W2 664 aa12.33□□□□□ -0.44
YIPF4-202ENST00000437765 DPYSL4O14531 572 aa12.32□□□□□ -0.44
YIPF4-202ENST00000437765 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
YIPF4-202ENST00000437765 NUDT7P0C024 238 aa12.29□□□□□ -0.44
YIPF4-202ENST00000437765 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
YIPF4-202ENST00000437765 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
YIPF4-202ENST00000437765 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
YIPF4-202ENST00000437765 POTEB3A0JP26 581 aa12.24□□□□□ -0.45
YIPF4-202ENST00000437765 TBC1D12O60347 775 aa12.24□□□□□ -0.45
YIPF4-202ENST00000437765 EVI5O60447 810 aa12.24□□□□□ -0.45
YIPF4-202ENST00000437765 PDIA6Q15084 440 aa12.24□□□□□ -0.45
YIPF4-202ENST00000437765 POTEBQ6S5H4 581 aa12.24□□□□□ -0.45
YIPF4-202ENST00000437765 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
YIPF4-202ENST00000437765 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
YIPF4-202ENST00000437765 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
YIPF4-202ENST00000437765 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
YIPF4-202ENST00000437765 EMP3P54852 163 aa12.19□□□□□ -0.46
YIPF4-202ENST00000437765 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
YIPF4-202ENST00000437765 PTGER2P43116 358 aa12.16□□□□□ -0.46
YIPF4-202ENST00000437765 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
YIPF4-202ENST00000437765 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
YIPF4-202ENST00000437765 POTEMA6NI47 508 aa12.14□□□□□ -0.47
YIPF4-202ENST00000437765 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
YIPF4-202ENST00000437765 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
YIPF4-202ENST00000437765 ERBB3P21860 1342 aa12.12□□□□□ -0.47
YIPF4-202ENST00000437765 SEMA3EO15041 775 aa12.12□□□□□ -0.47
YIPF4-202ENST00000437765 FOSBP53539 338 aa12.12□□□□□ -0.47
YIPF4-202ENST00000437765 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
YIPF4-202ENST00000437765 PCDHGA10Q9Y5H3 936 aa12.11□□□□□ -0.47
YIPF4-202ENST00000437765 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
YIPF4-202ENST00000437765 POTEEQ6S8J3 1075 aa12.09□□□□□ -0.47
YIPF4-202ENST00000437765 DDX12PQ92771 950 aa12.09□□□□□ -0.47
YIPF4-202ENST00000437765 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
YIPF4-202ENST00000437765 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
YIPF4-202ENST00000437765 TESPA1A2RU30 521 aaPredicted RBP12.06□□□□□ -0.48
YIPF4-202ENST00000437765 PHF14O94880 888 aa12.06□□□□□ -0.48
YIPF4-202ENST00000437765 OSBPP22059 807 aa12.04□□□□□ -0.48
YIPF4-202ENST00000437765 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
YIPF4-202ENST00000437765 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
YIPF4-202ENST00000437765 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
YIPF4-202ENST00000437765 ADAM33Q9BZ11 813 aa12.03□□□□□ -0.48
YIPF4-202ENST00000437765 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
YIPF4-202ENST00000437765 ZDHHC16Q969W1 377 aa12.01□□□□□ -0.49
YIPF4-202ENST00000437765 NBR1Q14596 966 aa12□□□□□ -0.49
YIPF4-202ENST00000437765 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
YIPF4-202ENST00000437765 EPAS1Q99814 870 aa12□□□□□ -0.49
YIPF4-202ENST00000437765 KRTAP3-3Q9BYR6 98 aa12□□□□□ -0.49
YIPF4-202ENST00000437765 KRTAP3-2Q9BYR7 98 aa12□□□□□ -0.49
YIPF4-202ENST00000437765 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
YIPF4-202ENST00000437765 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
YIPF4-202ENST00000437765 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
YIPF4-202ENST00000437765 AXIN2Q9Y2T1 843 aa11.97□□□□□ -0.49
YIPF4-202ENST00000437765 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
YIPF4-202ENST00000437765 PSEN2P49810 448 aa11.94□□□□□ -0.5
YIPF4-202ENST00000437765 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
YIPF4-202ENST00000437765 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
YIPF4-202ENST00000437765 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms