RNA–Protein interactions for RNA: ENST00000436722.1

LINC00411-201, long intergenic non-protein coding RNA 411, humanhuman

TSL 3 BASIC

Gene LINC00411, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00411-201ENST00000436722 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
LINC00411-201ENST00000436722 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
LINC00411-201ENST00000436722 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
LINC00411-201ENST00000436722 PTGER2P43116 358 aa12.73□□□□□ -0.37
LINC00411-201ENST00000436722 ANKRD13DQ6ZTN6 518 aa12.73□□□□□ -0.37
LINC00411-201ENST00000436722 ZFP91Q96JP5 570 aaPredicted RBP12.73□□□□□ -0.37
LINC00411-201ENST00000436722 RNF25Q96BH1 459 aaPredicted RBP12.7□□□□□ -0.38
LINC00411-201ENST00000436722 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
LINC00411-201ENST00000436722 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
LINC00411-201ENST00000436722 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00411-201ENST00000436722 NLRP6P59044 892 aa12.62□□□□□ -0.39
LINC00411-201ENST00000436722 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00411-201ENST00000436722 FBXO22Q8NEZ5 403 aa12.57□□□□□ -0.4
LINC00411-201ENST00000436722 NUDT7P0C024 238 aa12.54□□□□□ -0.4
LINC00411-201ENST00000436722 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
LINC00411-201ENST00000436722 C2orf72A6NCS6 295 aa12.52□□□□□ -0.41
LINC00411-201ENST00000436722 PBX2P40425 430 aa12.52□□□□□ -0.41
LINC00411-201ENST00000436722 KIF3CO14782 793 aa12.51□□□□□ -0.41
LINC00411-201ENST00000436722 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
LINC00411-201ENST00000436722 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
LINC00411-201ENST00000436722 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
LINC00411-201ENST00000436722 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
LINC00411-201ENST00000436722 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
LINC00411-201ENST00000436722 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
LINC00411-201ENST00000436722 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
LINC00411-201ENST00000436722 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
LINC00411-201ENST00000436722 SLC34A2O95436 690 aa12.44□□□□□ -0.42
LINC00411-201ENST00000436722 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
LINC00411-201ENST00000436722 STK25O00506 426 aa12.41□□□□□ -0.42
LINC00411-201ENST00000436722 TMC2Q8TDI7 906 aa12.39□□□□□ -0.43
LINC00411-201ENST00000436722 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
LINC00411-201ENST00000436722 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
LINC00411-201ENST00000436722 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
LINC00411-201ENST00000436722 TK2O00142 265 aa12.28□□□□□ -0.44
LINC00411-201ENST00000436722 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
LINC00411-201ENST00000436722 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
LINC00411-201ENST00000436722 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
LINC00411-201ENST00000436722 PSEN2P49810 448 aa12.27□□□□□ -0.45
LINC00411-201ENST00000436722 HRO43593 1189 aa12.26□□□□□ -0.45
LINC00411-201ENST00000436722 PPP1R37O75864 691 aa12.25□□□□□ -0.45
LINC00411-201ENST00000436722 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
LINC00411-201ENST00000436722 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
LINC00411-201ENST00000436722 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
LINC00411-201ENST00000436722 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
LINC00411-201ENST00000436722 RGL2O15211 777 aa12.19□□□□□ -0.46
LINC00411-201ENST00000436722 PLPP6Q8IY26 295 aa12.18□□□□□ -0.46
LINC00411-201ENST00000436722 FOXK1P85037 733 aa12.17□□□□□ -0.46
LINC00411-201ENST00000436722 TBC1D12O60347 775 aa12.14□□□□□ -0.47
LINC00411-201ENST00000436722 KCNK17Q96T54 332 aa12.13□□□□□ -0.47
LINC00411-201ENST00000436722 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
LINC00411-201ENST00000436722 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
LINC00411-201ENST00000436722 PTPN5P54829 565 aa12.11□□□□□ -0.47
LINC00411-201ENST00000436722 PKD2Q13563 968 aa12.11□□□□□ -0.47
LINC00411-201ENST00000436722 DSG2Q14126 1118 aa12.1□□□□□ -0.47
LINC00411-201ENST00000436722 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
LINC00411-201ENST00000436722 RGS20O76081 388 aa12.02□□□□□ -0.49
LINC00411-201ENST00000436722 IFFO2Q5TF58 517 aa12□□□□□ -0.49
LINC00411-201ENST00000436722 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
LINC00411-201ENST00000436722 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
LINC00411-201ENST00000436722 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC00411-201ENST00000436722 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
LINC00411-201ENST00000436722 THSD4Q6ZMP0 1018 aa11.98□□□□□ -0.49
LINC00411-201ENST00000436722 IRX2Q9BZI1 471 aaPredicted RBP11.98□□□□□ -0.49
LINC00411-201ENST00000436722 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
LINC00411-201ENST00000436722 BHMG1C9JSJ3 638 aaPredicted RBP11.97□□□□□ -0.49
LINC00411-201ENST00000436722 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
LINC00411-201ENST00000436722 A0A0G2JS52 829 aa11.94□□□□□ -0.5
LINC00411-201ENST00000436722 PTPREP23469 700 aa11.94□□□□□ -0.5
LINC00411-201ENST00000436722 WNT2BQ93097 391 aa11.94□□□□□ -0.5
LINC00411-201ENST00000436722 FOSBP53539 338 aa11.92□□□□□ -0.5
LINC00411-201ENST00000436722 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
LINC00411-201ENST00000436722 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
LINC00411-201ENST00000436722 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
LINC00411-201ENST00000436722 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
LINC00411-201ENST00000436722 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
LINC00411-201ENST00000436722 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
LINC00411-201ENST00000436722 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
LINC00411-201ENST00000436722 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
LINC00411-201ENST00000436722 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
LINC00411-201ENST00000436722 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
LINC00411-201ENST00000436722 EVI5O60447 810 aa11.82□□□□□ -0.52
LINC00411-201ENST00000436722 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
LINC00411-201ENST00000436722 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
LINC00411-201ENST00000436722 PDE4AP27815 886 aa11.77□□□□□ -0.53
LINC00411-201ENST00000436722 RYDENQ9NUL5 291 aaKnown RBP11.77□□□□□ -0.53
LINC00411-201ENST00000436722 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
LINC00411-201ENST00000436722 ANKK1Q8NFD2 765 aa11.75□□□□□ -0.53
LINC00411-201ENST00000436722 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
LINC00411-201ENST00000436722 RABGEF1Q9UJ41 708 aa11.74□□□□□ -0.53
LINC00411-201ENST00000436722 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
LINC00411-201ENST00000436722 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
LINC00411-201ENST00000436722 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
LINC00411-201ENST00000436722 PROX2Q3B8N5 592 aa11.72□□□□□ -0.53
LINC00411-201ENST00000436722 Q6ZNB5 142 aa11.71□□□□□ -0.53
LINC00411-201ENST00000436722 BCAMP50895 628 aa11.7□□□□□ -0.54
LINC00411-201ENST00000436722 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
LINC00411-201ENST00000436722 PCDHGA10Q9Y5H3 936 aa11.69□□□□□ -0.54
LINC00411-201ENST00000436722 COL9A1P20849 921 aa11.68□□□□□ -0.54
LINC00411-201ENST00000436722 SOWAHBA6NEL2 793 aa11.67□□□□□ -0.54
LINC00411-201ENST00000436722 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms